Biomedical Engineering and Bioengineering Commons^™

Novel Conditioning Protocols Focusing On Oxygen Manipulation To Enhance Stem Cell Transplantation, Brandon William Hanna

Theses and Dissertations

Musculoskeletal tissue engineering involves the creation of multiple tissue types that interact together to form a particular function related to motion and maintaining the body's frame. In order to create a fully functional musculoskeletal system, a concrete method for the creation of the different tissue types must first be completed. Of the different tissue components related to the function of a musculoskeletal system, these studies deal with preconditioning circumstances of stem cells that will differentiate into cartilage and bone. These studies also deal with methods for the creation of functional bone and cartilage to be combined for the creation of …

Discovery And Characterization Of Multi-Target Directed Ligands As Inhibitors Of Amyloid-Β Aggregation And Regulators Of Alzheimer's Disease, Jui-Heng Tseng

Theses and Dissertations

Alzheimer's disease (AD) is the most common neurodegenerative disease in the world. As the disease advances, symptoms include confusion, language skill breakdown, and long term memory loss - and culminate in death. Existing therapies for AD provide symptomatic benefits but cannot halt or slow the disease pathogenesis.

Increasing evidence reveals the multi-factorial nature of AD. Numerous factors, including amyloid-β (Aβ) aggregation, calcium homeostasis dysregulation, and oxidative stress, contribute to disease development and interplay with each other. Therefore, multi-target directed ligands (MTDLs) may present an effective AD treatment. Among all factors, Aβ aggregation is suggested to play the most crucial role. …

Virtual Capstone Design Teams: Preparing For Global Innovation (Conference Proceeding), Jay R. Goldberg, Susannah Howe

Biomedical Engineering Faculty Research and Publications

Global innovation requires collaboration between groups of people located in different parts of the world, and is a growing trend in industry. Virtual teams are often used to manage new product development projects. These teams are similar to traditional teams but are geographically separated and rely heavily on virtual methods of communication (email, Skype, teleconferencing, etc.) instead of regular face-to-face meetings. Experience working as a member of a virtual capstone design team can help prepare students for this growing trend. To begin preparing students for work on virtual teams in industry, we co-advised two virtual capstone design projects with students …

Bone Material Properties In Osteogenesis Imperfecta: A Matter Of Quantity Over Quality, Carolyne Albert, John Jameson, Gerald F. Harris, Peter Smith

Biomedical Engineering Faculty Research and Publications

No abstract provided.

A North American Consortium On Rehabilitation Engineering And Technology For The Individual, Barbara Silver-Thorn, Jessica Lothman, Terence Miller

Biomedical Engineering Faculty Research and Publications

The availability and accessibility of appropriate rehabilitative healthcare, medical technology and treatment is an important national and international issue of particular relevance due to recent national healthcare reform initiatives. The focus of this project was to increase global competencies and awareness among biomedical engineers of the differing rehabilitative healthcare needs in North America via student exchange with consortium institutions in the U.S., Canada and Mexico. The aim was to increase understanding of alternative healthcare delivery systems with respect to technology and interaction with diverse client populations in a clinical setting and to enhance the development and technology transfer of new …

Android-Based Smartphone Application Simulation And Systematic Design To Reduce Medication Administration Error In Prehospital Emergency Care., Natalie Vazquez

Theses and Dissertations

Since 1999 when the report To Err is Human: Building a Safer Health System was released, medical errors have come into focus (Kohn, 2000). In an effort to reduce medication administration errors in prehospital emergency care, an android-based smartphone application simulation was created. The app has components including QR barcode scanning, text to speech for medication cross-checking, weight-based medication dose calculations, and time stamped medication data wirelessly transferring to a database in real-time. Color standard identification was implemented, aiding to a designed systematic process for patient treatment to reduce medication errors. Direct observation was performed of emergency patient calls with …

Design And Validation Of A Computational Model For Study Of Scapholunate Joint Kinematics, Edward J. Tremols

Theses and Dissertations

As computational power has increased, computational modeling has become a very promising tool to model the biomechanics of complex joint systems. Musculoskeletal computational models have become more complex when compared to original iterations which utilized a number of simplifications. This thesis utilized a three-dimensional computational model of the wrist joint structure to investigate scapholunate kinematics. The model accurately represented the bony anatomy of the wrist and hand and represented soft tissue structures such as ligaments, tendons, and other surrounding tissues. Creation of the model was done using commercially available computer-aided design and medical image processing software, and utilized the rigid …

The Effect Of Simultaneous, Irrelevant Auditory And Visual Stimuli On A Forced-Attention Dichotic Listening Test, Keri Davis

Theses and Dissertations

Many of the studies examining cognitive control during selective attention across different sensory modalities conflict. This study was designed to study the effect of an irrelevant visual stimulus and an auditory distraction of backward speech on a forced attention dichotic listening test. I predicted that the visual stimulus and backward speech would not have a significant effect on the ear advantage. The results showed that all subjects were able to force their attention to the ear regardless of the visual or auditory distracters. In addition, I found that an irrelevant visual stimulus affects auditory attention more so in the left …

Development Of A Compact, Low-Cost Wireless Device For Biopotential Acquisition, Graham Kelly

Theses and Dissertations

A low-cost circuit board design is presented, which in one embodiment is smaller than a credit card, for biopotential (EMG, ECG, or EEG) data acquisition, with a focus on EEG for brain-computer interface applications. The device combines signal conditioning, low-noise and high-resolution analog-to-digital conversion of biopotentials, user motion detection via accelerometer and gyroscope, user-programmable digital pre-processing, and data transmission via Bluetooth communications. The full development of the device to date is presented, spanning three embodiments. The device is presented both as a functional data acquisition system and as a template for further development based on its publicly-available schematics and computer-aided …

Novel 3d Head And Neck Cancer Model To Evaluate Chemotherapeutic Efficacy, Kelly Morgan

Theses and Dissertations

HNSCC accounts for 7 percent of all new cancer occurrences. Despite currently available treatments, there continues to be a high mortality and recurrence rate in HNSCC. Well over 50 percent of all cancer patients receive chemotherapy as a standard treatment. However, only 5 percent of these cases have been shown to help with treatment of the disease. Formerly, two options were available for drug testing: in vivo animal models, and in vitro two-dimensional models. While in vivo models remain the most representative, their use is burdened by high costs, time constraints, and ethical concerns. 2D models are simple to use …

Coupling Graphs, Efficient Algorithms And B-Cell Epitope Prediction, Liang Zhao, Steven C. H. Hoi, Zhenhua Li, Limsoon Wong, Hung Nguyen

Research Collection School Of Computing and Information Systems

Coupling graphs are newly introduced in this paper to meet many application needs particularly in the field of bioinformatics. A coupling graph is a two-layer graph complex, in which each node from one layer of the graph complex has at least one connection with the nodes in the other layer, and vice versa. The coupling graph model is sufficiently powerful to capture strong and inherent associations between subgraph pairs in complicated applications. The focus of this paper is on mining algorithms of frequent coupling subgraphs and bioinformatics application. Although existing frequent subgraph mining algorithms are competent to identify frequent subgraphs …

Simultaneous Robotic Manipulation And Functional Magnetic Resonance Imaging: Feasibility In Children With Autism Spectrum Disorders, Nicole Marie Gregor Salowitz, Bridget K. Dolan, Rheanna Remmel, Amy V. Van Hecke, Kristine M. Mosier, Lucia S. Simo, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

An unanswered question concerning the neural basis of autism spectrum disorders (ASD) is how sensorimotor deficits in individuals with ASD are related to abnormalities of brain function. We previously described a robotic joystick and video game system that allows us to record functional magnetic resonance images (FMRI) while adult humans make goal- directed wrist motions. We anticipated several challenges in extending this approach to studying goal-directed behaviors in children with ASD and in typically developing (TYP) children. In particular we were concerned that children with autism may express increased levels of anxiety as compared to typically developing children due to …

Emerging Optical Techniques For Detection Of Oral, Cervical And Anal Cancer In Low-Resource Settings, Bing Yu, Daron G. Ferris, Yang Liu, Vivek K. Nagarajan

Biomedical Engineering Faculty Research and Publications

Cancers of the oral and anogenital regions are a growing global health problem that disproportionately impact women and men living in developing countries. The high death rate in developing countries is largely due to the fact that these countries do not have the appropriate medical infrastructure and resources to support the organized screening and diagnostic programs that are available in the developed world. Emerging optical diagnostics techniques, such as optical spectroscopy, reflectance imaging, and fluorescence imaging, are noninvasive techniques that are sensitive to multiple cancer biomarkers and have shown the potential as a cost–effective and fast tool for diagnosis of …

Which Design And Biomaterial Factors Affect Clinical Wear Performance Of Total Disc Replacements? A Systematic Review, Sai Y. Veruva, Marla J. Steinbeck, Jeffrey M. Toth, Dominik D. Alexander, Steven M. Kurtz

Biomedical Engineering Faculty Research and Publications

Background

Total disc replacement was clinically introduced to reduce pain and preserve segmental motion of the lumbar and cervical spine. Previous case studies have reported on the wear and adverse local tissue reactions around artificial prostheses, but it is unclear how design and biomaterials affect clinical outcomes.

Questions/purposes

Which design and material factors are associated with differences in clinical wear performance (implant wear and periprosthetic tissue response) of (1) lumbar and (2) cervical total disc replacements?

Methods

We performed a systematic review on the topics of implant wear and periprosthetic tissue response using an advanced search in MEDLINE and Scopus …

Evaluation Of Upper Extremity Movement Characteristics During Standardized Pediatric Functional Assessment With A Kinect®-Based Markerless Motion Analysis System, Jacob R. Rammer, Joseph J. Krzak, Susan A. Riedel, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

A recently developed and evaluated upper extremity (UE) markerless motion analysis system based on the Microsoft® Kinect® has potential for improving functional assessment of patients with hemiplegic cerebral palsy. 12 typically-developing adolescents ages 12-17 were evaluated using both the Kinect-based system and the Shriners Hospitals for Children Upper Extremity Evaluation (SHUEE), a validated measure of UE motion. The study established population means of UE kinematic parameters for each activity. Statistical correlation analysis was used to identify key kinematic metrics used to develop automatic scoring algorithms. The Kinect motion analysis platform is technically sound and can be applied to standardized task-based …

Age-Related Differentiation Of Sensorimotor Control Strategies During Pursuit And Compensatory Tracking, Megan L. Heenan, Robert A. Scheidt, Scott A. Beardsley

Biomedical Engineering Faculty Research and Publications

Motor control deficits during aging have been well-documented. Various causes of neuromotor decline, including both peripheral and central neurological deficits, have been hypothesized. Here, we use a model of closed-loop sensorimotor control to examine the functional causes of motor control deficits during aging. We recruited 14 subjects aged 19-61 years old to participate in a study in which they performed single-joint compensatory and pursuit tracking tasks with their dominant hand. We found that visual response delay and visual noise increased with age, while reliance on visual feedback, especially during compensatory tracking decreased. Increases in visual noise were also positively correlated …

Diffusion Tensor Imaging Of The Spinal Cord: Insights From Animal And Human Studies, Aditya Vedantam, Michael B. Jirjis, Brian D. Schmit, Marjorie C. Wang, John L. Ulmer, Shekar N. Kurpad

Biomedical Engineering Faculty Research and Publications

Diffusion tensor imaging (DTI) provides a measure of the directional diffusion of water molecules in tissues. The measurement of DTI indexes within the spinal cord provides a quantitative assessment of neural damage in various spinal cord pathologies. DTI studies in animal models of spinal cord injury indicate that DTI is a reliable imaging technique with important histological and functional correlates. These studies demonstrate that DTI is a noninvasive marker of microstructural change within the spinal cord. In human studies, spinal cord DTI shows definite changes in subjects with acute and chronic spinal cord injury, as well as cervical spondylotic myelopathy. …

Synergistic Toughening Of Hard, Nacre-Mimetic Mosi2 Coatings By Self-Assembled Hierarchical Structure, Jiang Xu, Xiaoli Zhao, Paul Munroe, Zonghan Xie

Research outputs 2014 to 2021

Like many other intermetallic materials, MoSi2 coatings are typically hard, but prone to catastrophic failure due to their low toughness at ambient temperature. In this paper, a self-assembled hierarchical structure that closely resembles that of nacre (i.e., mother of pearl) was developed in a MoSi2 -based coating through a simple, yet cost-effective, depostion technique. The newly formed coating is tough and can withstand multiple indentations at high loads. Key design features responsible for this remarkable outcome were identified. They include a functionally graded multilayer featuring elastic modulus oscillation, varying sublayer thickness and a columnar structure that are able to attenuate …

Characterizing The Resolvability Of Real Superluminescent Diode Sources For Application To Optical Coherence Tomography Using A Low Coherence Interferometry Model, Paul V. Jansz, Steven Richardson, Graham Wild, Steven Hinckley

Research outputs 2014 to 2021

The axial resolution is a critical parameter in determining whether optical coherent tomography (OCT) can be used to resolve specific features in a sample image. Typically, measures of resolution have been attributed to the light source characteristics only, including the coherence length and the point spread function (PSF) width of the OCT light sources. The need to cost effectively visualize the generated PSF and OCT cross-correlated interferogram (A-scan) using many OCT light sources have led to the extrinsic evolution of the OCT simulation model presented. This research indicated that empirical resolution in vivo, as well as depending on the light …

A Nonrigid Registration Method For Correcting Brain Deformation Induced By Tumor Resection, Yixun Liu, Chengjun Yao, Fotis Drakopoulos, Jinsong Wu, Liangfu Zhou, Nikos Chrisochoides

Computer Science Faculty Publications

Purpose: This paper presents a nonrigid registration method to align preoperative MRI with intraoperative MRI to compensate for brain deformation during tumor resection. This method extends traditional point-based nonrigid registration in two aspects: (1) allow the input data to be incomplete and (2) simulate the underlying deformation with a heterogeneous biomechanical model.

Methods: The method formulates the registration as a three-variable (point correspondence, deformation field, and resection region) functional minimization problem, in which point correspondence is represented by a fuzzy assign matrix; Deformation field is represented by a piecewise linear function regularized by the strain energy of a heterogeneous biomechanical …