Other Computer Sciences Commons^™

Control And Calibration Strategies For Quantum Simulation, Paul M. Kairys

Doctoral Dissertations

The modeling and prediction of quantum mechanical phenomena is key to the continued development of chemical, material, and information sciences. However, classical computers are fundamentally limited in their ability to model most quantum effects. An alternative route is through quantum simulation, where a programmable quantum device is used to emulate the phenomena of an otherwise distinct physical system. Unfortunately, there are a number of challenges preventing the widespread application of quantum simulation arising from the imperfect construction and operation of quantum simulators. Mitigating or eliminating deleterious effects is critical for using quantum simulation for scientific discovery. This dissertation develops strategies …

Video Games, Grief, And The Character Link System, Nam Nguyen

University of New Orleans Theses and Dissertations

Grief can encompass more than just the loss of real-life people. It can be felt with the loss of a pet, changes in daily structure, and even the loss of video game characters. The topic of grief related to video games and video game characters comes at a time when games as a service (GaaS) continue to increase in popularity and the phenomenon where these games also inevitably terminate service. To combat this unique form of grief, the Character LINK System was created as a tool that uses simple natural language processing (NLP) techniques to offer support to the bereaved …

Quantum Federated Learning: Training Hybrid Neural Networks Collaboratively, Anneliese Brei

Undergraduate Honors Theses

This thesis explores basic concepts of machine learning, neural networks, federated learning, and quantum computing in an effort to better understand Quantum Machine Learning, an emerging field of research. We propose Quantum Federated Learning (QFL), a schema for collaborative distributed learning that maintains privacy and low communication costs. We demonstrate the QFL framework and local and global update algorithms with implementations that utilize TensorFlow Quantum libraries. Our experiments test the effectiveness of frameworks of different sizes. We also test the effect of changing the number of training cycles and changing distribution of training data. This thesis serves as a synoptic …

An Educator’S Perspective Of The Tidyverse, Mine Çetinkaya-Rundel, Johanna Hardin, Benjamin Baumer, Amelia Mcnamara, Nicholas J. Horton, Colin W. Rundel

Statistical and Data Sciences: Faculty Publications

Computing makes up a large and growing component of data science and statistics courses. Many of those courses, especially when taught by faculty who are statisticians by training, teach R as the programming language. A number of instructors have opted to build much of their teaching around use of the tidyverse. The tidyverse, in the words of its developers, “is a collection of R packages that share a high-level design philosophy and low-level grammar and data structures, so that learning one package makes it easier to learn the next” (Wickham et al. 2019). These shared principles have led to the …

Twitter's Role In An Increasingly Polarized Political Climate; A Look Into The 2020 Us Elections, Leanne Kendall

Honors Projects in Data Science

Amidst politically strained times, one might wonder what has cause such an exaggerated gap between the views of democrats and republicans. For years, research has suggested the US’s voting population is becoming increasingly politically polarized, with one of the causes being social media. This study's purpose is to understand more about the role that social media plays in the polarization of parties in the US. The study is comprised of the analysis of over 3,000,000 tweets from 9/22/2020 through 11/10/2020 that mention or are written by senate and presidential candidates. Natural language processing, network graphing, and sentiment analyses were utilized …

Cancel Culture: Who Or What Will Be Next?, Christine Trumper

Honors Projects in Data Science

This paper utilizes Data Science and Applied Statistic techniques, to perform an analytical dive into Cancel Culture as it is referenced and used on Twitter. The research focuses on analyzing how Cancel Culture has affected the sentiment of Twitter, specifically how it impacts prominent topics in the media that have occurred between February 2021 to September 2021. The development of a topic and sentiment analysis will be based on 1,302,844 Tweets collected using Twitter’s API. Cancel Culture became popularized on social media in the past few years and there is little concrete information regarding its process and the demographics it …

Identifying Factors That Lead To Injury In The Nfl, Matthew Toner

Honors Projects in Data Science

This study hypothesizes that injury-causing factors can be identified through training machine learning models with NFL injury data. The machine learning process entailed web scraping, pre-processing, cleaning, modeling, and analyzing NFL injury data to identify these factors. The features used to model injuries included the following: games played, games started, weight, height, age, year, years of experience, starting position, and team. The four models used to model NFL injuries were Logistic Regression, Decision Trees, Random Forests, and Gradient Boosted Trees. The model with the best performance was the Gradient Boosted Trees model, with an F1 score of 0.508. In addition, …

Statistical Study Into The World Of Nft Investing And The Process Behind It, Daon Morris, Teddy Gamboa, Akeisha Belgrave

Harrisburg University Research Symposium: Highlighting Research, Innovation, & Creativity

For the purpose of this project, we gathered data from the young adults and adults of the Harrisburg University campus in support of the fact that NFT’s are not like other forms of investments in terms of the strategy used. Rather, the way people invest in them is by just simply looking at the picture, and whatever NFT people think looks cool is the NFT that will skyrocket in value.(Class Project)

Changeling Vr, Elouise Oyzon

Frameless

Changeling VR is an interactive virtual reality narrative game. As we progress through the game, each level is seen through the Point of View of a different character whose emotional core is expressed through different aesthetics, mechanics and interactions.

Computer Simulations And Network-Based Profiling Of Binding And Allosteric Interactions Of Sars-Cov-2 Spike Variant Complexes And The Host Receptor: Dissecting The Mechanistic Effects Of The Delta And Omicron Mutations, Gennady M. Verkhivker, Steve Agajanian, Ryan Kassab, Keerthi Krishnan

Mathematics, Physics, and Computer Science Faculty Articles and Research

In this study, we combine all-atom MD simulations and comprehensive mutational scanning of S-RBD complexes with the angiotensin-converting enzyme 2 (ACE2) host receptor in the native form as well as the S-RBD Delta and Omicron variants to (a) examine the differences in the dynamic signatures of the S-RBD complexes and (b) identify the critical binding hotspots and sensitivity of the mutational positions. We also examined the differences in allosteric interactions and communications in the S-RBD complexes for the Delta and Omicron variants. Through the perturbation-based scanning of the allosteric propensities of the SARS-CoV-2 S-RBD residues and dynamics-based network centrality and …

Machine Learning Based Medical Image Deepfake Detection: A Comparative Study, Siddharth Solaiyappan, Yuxin Wen

Engineering Faculty Articles and Research

Deep generative networks in recent years have reinforced the need for caution while consuming various modalities of digital information. One avenue of deepfake creation is aligned with injection and removal of tumors from medical scans. Failure to detect medical deepfakes can lead to large setbacks on hospital resources or even loss of life. This paper attempts to address the detection of such attacks with a structured case study. Specifically, we evaluate eight different machine learning algorithms, which include three conventional machine learning methods (Support Vector Machine, Random Forest, Decision Tree) and five deep learning models (DenseNet121, DenseNet201, ResNet50, ResNet101, VGG19) …

Considering The Context To Build Theory In Hci, Hri, And Hmc: Explicating Differences In Processes Of Communication And Socialization With Social Technologies, Andrew Gambino, Bingjie Liu

Human-Machine Communication

The proliferation and integration of social technologies has occurred quickly, and the specific technologies with which we engage are ever-changing. The dynamic nature of the development and use of social technologies is often acknowledged by researchers as a limitation. In this manuscript, however, we present a discussion on the implications of our modern technological context by focusing on processes of socialization and communication that are fundamentally different from their interpersonal corollary. These are presented and discussed with the goal of providing theoretical building blocks toward a more robust understanding of phenomena of human-computer interaction, human-robot interaction, human-machine communication, and interpersonal …

Ubjective Information And Survival In A Simulated Biological System, Tyler S. Barker, Massimiliano Pierobon, Peter J. Thomas

CSE Journal Articles

Information transmission and storage have gained traction as unifying concepts to characterize biological systems and their chances of survival and evolution at multiple scales. Despite the potential for an information-based mathematical framework to offer new insights into life processes and ways to interact with and control them, the main legacy is that of Shannon’s, where a purely syntactic characterization of information scores systems on the basis of their maximum information efficiency. The latter metrics seem not entirely suitable for biological systems, where transmission and storage of different pieces of information (carrying different semantics) can result in different chances of survival. …

Leaderboard Design Principles Influencing User Engagement In An Online Discussion, Brian S. Bovee

Masters Theses & Doctoral Dissertations

Along with the popularity of gamification, there has been increased interest in using leaderboards to promote engagement with online learning systems. The existing literature suggests that when leaderboards are designed well they have the potential to improve learning, but qualitative investigations are required in order to reveal design principles that will improve engagement. In order to address this gap, this qualitative study aims to explore students' overall perceptions of popular leaderboard designs in a gamified, online discussion. Using two leaderboards reflecting performance in an online discussion, this study evaluated multiple leaderboard designs from student interviews and other data sources regarding …

Analysis Of An Existing Method In Refinement Of Protein Structure Predictions Using Cryo-Em Images, Maytha Alshammari, Jing He, Willy Wriggers, Jiangwen Sun

College of Sciences Posters

Protein structure prediction produces atomic models from its amino acid sequence. Three-dimensional structures are important for understanding the function mechanism of proteins. Knowing the structure of a given protein is crucial in drug development design of novel enzymes. AlphaFold2 is a protein structure prediction tool with good performance in recent CASP competitions. Phenix is a tool for determination of a protein structure from a high-resolution 3D molecular image. Recent development of Phenix shows that it is capable to refine predicted models from AlphaFold2, specifically the poorly predicted regions, by incorporating information from the 3D image of the protein. The goal …

Performance Analysis And Improvement For Scalable And Distributed Applications Based On Asynchronous Many-Task Systems, Nanmiao Wu

LSU Doctoral Dissertations

As the complexity of recent and future large-scale data and exascale systems architectures grows, so do productivity, portability, software scalability, and efficient utilization of system resources challenges presented to both industry and the research community. Software solutions and applications are expected to scale in performance on such complex systems. Asynchronous many-task (AMT) systems, taking advantage of multi-core architectures with light-weight threads, asynchronous executions, and smart scheduling, are showing promise in addressing these challenges.

In this research, we implement several scalable and distributed applications based on HPX, an exemplar AMT runtime system. First, a distributed HPX implementation for a parameterized benchmark …

Dissecting Mutational Allosteric Effects In Alkaline Phosphatases Associated With Different Hypophosphatasia Phenotypes: An Integrative Computational Investigation, Fei Xiao, Ziyun Zhou, Xingyu Song, Mi Gan, Jie Long, Gennady M. Verkhivker, Guang Hu

Mathematics, Physics, and Computer Science Faculty Articles and Research

Hypophosphatasia (HPP) is a rare inherited disorder characterized by defective bone mineralization and is highly variable in its clinical phenotype. The disease occurs due to various loss-of-function mutations in ALPL, the gene encoding tissue-nonspecific alkaline phosphatase (TNSALP). In this work, a data-driven and biophysics-based approach is proposed for the large-scale analysis of ALPL mutations-from nonpathogenic to severe HPPs. By using a pipeline of synergistic approaches including sequence-structure analysis, network modeling, elastic network models and atomistic simulations, we characterized allosteric signatures and effects of the ALPL mutations on protein dynamics and function. Statistical analysis of molecular features computed for the …

Diabetic Foot Exam System, Stephanie Trusty

Undergraduate Research Symposium

The diabetic foot exam system aims to perform certain aspects of the dermatological and musculoskeletal assessments that are typical to a 3-minute diabetic foot exam. Utilizing the RaspberryPi computer and camera module, the system seeks to capture a series of images of the patient’s foot. It then evaluates these images for calluses, blisters, and three types of deformities: claw toe deformities, hammertoe deformities, and bunions. This evaluation is performed using a trained TensorFlow image classification model, which categorizes the image as a callus, blister, or deformity. The system was tested using six different images: four callus images, a hammertoe deformity …

Covid-19 Classroom Occupancy Detection System, Stephanie Trusty

Undergraduate Research Symposium

The classroom occupancy detection system aims to limit the spread of COVID-19 and support mitigation efforts advised by national and international health organizations by enforcing social distancing in classroom environments. Utilizing the RaspberryPi computer and its compatible camera module, the system accomplishes this by capturing an overhead image of a classroom and assessing the image for violations. Here, violations are defined as the presence of adjacent occupied seats. As such, for an acceptable state to be detected, there must be at least one vacant seat between all students seated in the classroom. The system communicates the classroom’s state with two …

A Deep Learning-Based Approach To Extraction Of Filler Morphology In Sem Images With The Application Of Automated Quality Inspection, Md. Fashiar Rahman, Tzu-Liang Bill Tseng, Jianguo Wu, Yuxin Wen, Yirong Lin

Engineering Faculty Articles and Research

Automatic extraction of filler morphology (size, orientation, and spatial distribution) in Scanning Electron Microscopic (SEM) images is essential in many applications such as automatic quality inspection in composite manufacturing. Extraction of filler morphology greatly depends on accurate segmentation of fillers (fibers and particles), which is a challenging task due to the overlap of fibers and particles and their obscure presence in SEM images. Convolution Neural Networks (CNNs) have been shown to be very effective at object recognition in digital images. This paper proposes an automatic filler detection system in SEM images, utilizing a Mask Region-based CNN architecture. The proposed system …