Marine Biology Commons^™

Low Florida Coral Calcification Rates In The Plio-Pleistocene, Thomas C. Brachert, Markus Reuter, Stefan Kruger, James S. Klaus, Kevin P. Helmle, Janice M. Lough

Marine & Environmental Sciences Faculty Articles

In geological outcrops and drill cores from reef frameworks, the skeletons of scleractinian corals are usually leached and more or less completely transformed into sparry calcite because the highly porous skeletons formed of metastable aragonite (CaCO3) undergo rapid diagenetic alteration. Upon alteration, ghost structures of the distinct annual growth bands often allow for reconstructions of annual extension ( =  growth) rates, but information on skeletal density needed for reconstructions of calcification rates is invariably lost. This report presents the bulk density, extension rates and calcification rates of fossil reef corals which underwent minor diagenetic alteration only. The corals derive from …

Unprecedented Disease-Related Coral Mortality In Southeastern Florida, William F. Precht, Brooke Erin Gintert, Martha L. Robbart, Ryan Fura, Robert Van Woesik

Ocean Engineering and Marine Sciences Faculty Publications

Anomalously high water temperatures, associated with climate change, are increasing the global prevalence of coral bleaching, coral diseases, and coral-mortality events. Coral bleaching and disease outbreaks are often inter-related phenomena, since many coral diseases are a consequence of opportunistic pathogens that further compromise thermally stressed colonies. Yet, most coral diseases have low prevalence (<5%), and are not considered contagious. By contrast, we document the impact of an extremely high-prevalence outbreak (61%) of white-plague disease at 14 sites off southeastern Florida. White-plague disease was observed near Virginia Key, Florida, in September 2014, and after 12 months had spread 100 km north and 30 km south. The disease outbreak directly followed a high temperature coral-bleaching event and affected at least 13 coral species. Eusmilia fastigiata, Meandrina meandrites, and Dichocoenia stokesi were the most heavily impacted coral species, and were reduced to <3% of their initial population densities. A number of other coral species, including Colpophyllia natans, Pseudodiploria strigosa, Diploria labyrinthiformis, and Orbicella annularis were reduced to <25% of their initial densities. The high prevalence of disease, the number of susceptible species, and the high mortality of corals affected suggests this disease outbreak is arguably one of the most lethal ever recorded on a contemporary coral reef.

Fish Communities Associated With Cold-Water Corals Vary With Depth And Substratum Type, Rosanna Milligan, Gemma Spence, J. Murray Roberts, David M. Bailey

Marine & Environmental Sciences Faculty Articles

Understanding the processes that drive the distribution patterns of organisms and the scales over which these processes operate are vital when considering the effective management of species with high commercial or conservation value. In the deep sea, the importance of scleractinian cold-water corals (CWCs) to fish has been the focus of several studies but their role remains unclear. We propose this may be due to the confounding effects of multiple drivers operating over multiple spatial scales. The aims of this study were to investigate the role of CWCs in shaping fish community structure and individual species-habitat associations across four spatial …

How Do Oil, Gas, And Water Interact Near A Subsea Blowout?, Scott A. Socolofsky, E. Eric Adams, Claire B. Paris-Limouzy, Di Yang

C-IMAGE Publications

Oil and gas from a subsea blowout shatter into droplets and bubbles that rise through the water column, entraining ambient seawater and forming a plume. Local density stratification and currents eventually arrest this rising plume, and the entrained water, enriched with dissolved hydrocarbons and some of the smaller oil droplets, forms one or more subsurface intrusion layers. Beyond the plume and intrusion layer(s), droplets and bubbles advect and diffuse by local currents and dissolve and biodegrade as they rise to the surface, where they are transported by wind and waves. These processes occur over a wide range of length scales …

Methods Of Oil Detection In Response To The Deepwater Horizon Oil Spill, Helen K. White, Robyn N. Conmy, Ian R. Macdonald, Christopher M. Reddy

C-IMAGE Publications

Detecting oil in the northern Gulf of Mexico following the Deepwater Horizon oil spill presented unique challenges due to the spatial and temporal extent of the spill and the subsequent dilution of oil in the environment. Over time, physical, chemical, and biological processes altered the composition of the oil, further complicating its detection. Reservoir fluid, containing gas and oil, released from the Macondo well was detected in surface and subsurface environments. Oil monitoring during and after the spill required a variety of technologies, including nimble adaptation of techniques developed for non-oil-related applications. The oil detection technologies employed varied in sensitivity, …

Chemical Composition Of Macondo And Other Crude Oils And Compositional Alterations During Oil Spills, Edward B. Overton, Terry L. Wade, Jagoš R. Radović, Buffy M. Meyer, M. Scott Miles, Stephen R. Larter

C-IMAGE Publications

Crude oils are some of the most complex and diverse organic mixtures found in nature. They contain thousands of different compounds belonging to several compound classes, with the main ones being hydrocarbons and their heteroatom (N, S, and O)-containing analogs, called non-hydrocarbons. In general, all crude oils contain the same types of chemical structures, but these compounds can be in highly variable proportions in crude oils drawn from different reservoir conditions and locations. Both the types of compounds and their respective quantities change rapidly once the crude oil is spilled into the environment, making the circumstances associated with every spill …

Weathering Of Oil Spilled In The Marine Environment, Matthew A. Tarr, Phoebe Zito, Edward B. Overton, Gregory M. Olson, Puspa L. Adhikari, Christopher M. Reddy

C-IMAGE Publications

Crude oil is a complex mixture of many thousands of mostly hydrocarbon and nitrogen-, sulfur-, and oxygen-containing compounds with molecular weights ranging from below 70 Da to well over 2,000 Da. When this complex mixture enters the environment from spills, ruptures, blowouts, or seeps, it undergoes a continuous series of compositional changes that result from a process known as weathering. Spills of petroleum involving human activity generally result in more rapid input of crude oil or refined products (diesel, gasoline, heavy fuel oil, and diluted bitumens) to the marine system than do natural processes and urban runoffs. The primary physicochemical …

Guideline For Stakeholder Engagement On Aquatic Resource Management-Related Processes, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

The Effect Of Auditory Stimulation On Sleep Disruption In West Indian Manatee (Trichechus Manatus Latirostris), Natalija Lace

Dissertations

Florida manatees inhabit waterways where motorized boats are common. Although manatee mortalities resulting from boat strikes are well documented, the effect of boat noise on some manatee behaviors, including rest, has not been investigated. This study focuses on rest behavior and used a playback experiment with four manatees at the Lowry Park Zoo in Florida. We tested their responses to playback stimuli of either boat noise, silence, or manatee calls. A playback trial was initiated when the focal animal showed behavioral characteristics of rest.

Results showed that rest was interrupted in response to the playback of boat noise for each …

Growth And Reproduction Of Southern Flounder (Paralichthys Lethostigma) In The North-Central Gulf Of Mexico, Morgan Marie Corey

Master's Theses

Southern Flounder Paralichthys lethostigma is the most commonly harvested flatfish in the north-central Gulf of Mexico (GOM) and supports a major inshore recreational fishery, yet knowledge of the species’ life history is greatly limited. The objective of this research was to describe the growth and reproduction of Southern Flounder in the Mississippi stock. Fish were collected during September 2014 to March 2016 using primarily recreational fishing techniques. Otoliths (n = 313) were sectioned to estimate age, and multiple length-at-age models were fit to total length (TL, mm) and age estimate (y) data. Gonadal tissue samples (n = 221) …

Community Structure And Production Of The Macrobenthos On Four Artificial Reefs In The Mississippi Sound In Relation To Substrate And Profile Type, Patrick Daniel Gillam

Master's Theses

In recent years, the Mississippi Department of Marine Resources (DMR) has made a concerted effort to enhance its coastal fishery resources by creating artificial reefs. Through this effort, 73 nearshore reefs have been created across the MS coast. Different substrate types used to construct MS artificial reefs include oyster shell and cement rubble. Two types of reef architecture used include high profile breakwater and low profile submerged structures. This study compared the benthic biota associated with oyster shell and cement rubble substrates among four artificial reefs representing high and low profile structures in summer 2011. Colonized benthic biota were quantified …

Coral Persistence To Ocean Warming Via Developmental Acclimation, Heather L. Schaneen

HCNSO Student Theses and Dissertations

Scleractinian corals are the ‘engineers’ of tropical coral reef ecosystems. Their three-dimensional structure provides habitat for thousands of fish and invertebrate species. The persistence of corals is threatened by climate change. In this study I investigated if corals may be able to increase tolerance to ocean warming through developmental acclimation, i.e. if corals that experience warmer temperatures during embryonic and larval development are better able to cope with higher temperatures later in life. Larvae of the broadcast spawning coral Montastraea cavernosa were raised at ambient (29°C) and future projected ocean warming temperatures (+2°C, 31°C). After larval settlement, coral juveniles from …

Fibropapillomatosis In Marine Turtles: A Comprehensive Review, Samantha L. Mccorkle

HCNSO Student Capstones

Fibropapillomatosis is a disease that affects six of the seven species of marine turtles. The disease was first noticed in 1928, and wasn’t observed again until the 1970s. By the 1980s there was a rapid spread of fibropapillomatosis through the sea turtle population, becoming an endemic in both Florida and Hawaii. By 1995 the concentration of disease in the population reached its climax and has showed a decline in prevalence since. After identifying a viral cause studies began to focus on cultivating the virus in the lab and sequencing, while the virus has been sequenced it has not been successfully …

Temporal And Spatial Distribution Of Cetacean Strandings Focusing On The Bottlenose Dolphin (Tursiops Truncatus) With A Synthesis Of Potential Causes, April D. Clark

HCNSO Student Capstones

A comprehensive review of the literature and a quantitative statistical analysis of that information are presented. A total of 6,015 cetaceans stranded at 36 locations from 24 peer reviewed articles published between 1999 and 2014 are documented, with the two most common stranding locations being the Canary Islands - accounting for 49 of the total cetacean stranding events - and Cape Cod - accounting for 31 of total cetacean stranding events. The documented cetacean stranding events included 805 for bottlenose dolphins (Tursiops truncatus) at a total of ten locations from 11 peer reviewed articles. When all single stranding …

Transgenerational Effects Of Thermal Stress: Impacts On And Beyond Coral Reproduction, Alyson Kuba

HCNSO Student Theses and Dissertations

Ocean warming causes stress to corals and records reveal that periods of thermal stress are increasing in frequency and severity. Previous studies show that thermal stress negatively impacts the reproductive output of corals. However, the transgenerational impacts of coral bleaching have never been quantified. As a consequence, it is unclear how ocean warming may alter population dynamics due to effects on reproduction and recruitment. This study quantified the transgenerational impacts of thermal stress in Montastraea cavernosa. To assess transgenerational effects of temperature stress during gametogenesis, colonies were exposed to elevated temperature for two weeks four months prior to spawning, …

Can Skeletal Morphology Support New Molecular Phylogenies Of Antedonidae (Crinoidea: Comatulida)?, Brenna Hays

HCNSO Student Theses and Dissertations

Antedonidae (Crinoidea: Comatulida) is the largest of extant crinoid families; it currently includes ~155 accepted species in 50 genera and accounts for ~23% of extant crinoid species (~29% of feather stars) and 27% of genera. Molecular phylogenies have returned the family as polyphyletic, with several clades scattered among non-antedonid sister groups (Hemery 2011, Hemery et al. 2013, Rouse et al. in prep.). Traditional morphological characteristics are thus inadequate for reconstructing relationships among taxa. SEM imaging was used in an effort to discover new diagnostic features that will support the molecular data, focusing on skeletal ossicles within the calyx, specifically the …

Artificial Reefs As Juvenile Fish Habitats In Marinas, Allison Patranella

HCNSO Student Theses and Dissertations

Coastal infrastructure has replaced many vital fish nursery habitats with structures designed without fully mitigating for the loss of the natural ecosystems. This thesis details research focused on the use of small, inexpensive, artificial reef modules as replacement juvenile fish habitat within marinas. My research hypothesis was that the placement of small, structurally complex artificial reef modules would increase fish abundance and species richness relative to unmodified marina seawalls. Non-destructive visual surveys of fishes were completed monthly for 14 months for 12 artificial reef sites and 12 control (unmodified) sites within the Nova Southeastern University Guy Harvey Oceanographic Center (NSU-GHOC) …

Reproductive Ecology Of Dragonfishes (Family: Stomiidae) In The Gulf Of Mexico, Alex D. Marks

HCNSO Student Theses and Dissertations

The most speciose group of fishes in the Gulf of Mexico is the dragonfishes (Family: Stomiidae). These fishes are dominant mesopelagic predators occurring throughout the world’s oceans, including the Antarctic seas. Little is known regarding their reproductive ecology, a consequence attributed to insufficient sample sizes of mature adults due to inadequacies of sampling gear; larger, sexually mature stomiid adults are more adept at net avoidance, thereby obfuscating synoptic reproductive biology studies. Between 2010-2011, the Offshore Nekton Sampling and Analysis Program was initiated in the northern Gulf of Mexico over all four seasons using a discrete-depth sampling system (MOCNESS) and a …

Changes In Tursiops Truncatus Distribution And Behavior In The Drowned Cayes, Belize, And Correlation To Human Impacts, Jazmin Garcia

HCNSO Student Theses and Dissertations

Human interaction greatly influences the behavior and distribution of bottlenose dolphins (Tursiops truncatus). This project focuses on the distribution and behavior of bottlenose dolphins in the Drowned Cayes, Belize. Prior to the 2000s, the area was relatively undeveloped and undisturbed and had minimal human activity. Since the turn of the millennium, development and ecotourism activity has flourished in the area, increasing by more than 800,000 visitors from 1998-2006. Boat-based surveys were conducted in 2015 and were combined with previous survey data collected from 2005-2012 and compared to behavioral survey results from 1999-2000. Total dolphin observation time as a …

Effects Of Shoreline Dynamics On Saltmarsh Vegetation, Shailesh Sharma, Joshua Goff, Ryan M. Moody, Ashley Mcdonald, Dorothy Byron, Kenneth L. Heck Jr., Sean Powers, Carl Ferraro, Just Cebrian

University Faculty and Staff Publications

We evaluated the impact of shoreline dynamics on fringing vegetation density at mid- and low-marsh elevations at a high-energy site in the northern Gulf of Mexico. Particularly, we selected eight unprotected shoreline stretches (75 m each) at a historically eroding site and measured their inter-annual lateral movement rate using the DSAS method for three consecutive years. We observed high inter-annual variability of shoreline movement within the selected stretches. Specifically, shorelines retrograded (eroded) in year 1 and year 3, whereas, in year 2, shorelines advanced seaward. Despite shoreline advancement in year 2, an overall net erosion was recorded during the survey …

Can Twilight Reefs Usher In A New Dawn For Depauperate Shallow Coral Reefs?, Hunter Kg Noren

HCNSO Student Theses and Dissertations

As shallow reefs continue to decline, scientists are searching for the key to their persistence; as it turns out, they may just need to look deeper. Below many shallow tropical reefs, there exist healthy and more stable mesophotic coral reef communities. The ability of these reefs to act as a refuge for declining shallow populations has garnered significant interest among the scientific community; however, the reproductive and larval aspects necessary for this to occur are unknown. This study assesses the ability of deep reefs to act as a reproductive refuge for shallow counterparts by examining gametic compatibility, viability and larval …

Effects Of Emf Emissions From Undersea Electric Cables On Coral Reef Fishes, Robert F. Jermain

HCNSO Student Theses and Dissertations

The objective of this project was to determine if the electromagnetic field (EMF) emissions from undersea power cables impacted the local and transient marine life, with an emphasis on reef fishes. The work was done at South Florida Ocean Measurement Facility of Naval Surface Warfare Center, Carderock Division, Broward County, Florida. This facility functions as the hub for a range of active undersea detection and data transmission cables. It has multiple active submarine power cables that extend several miles offshore and which can deliver power and enable data transmission to and from a range of acoustic and EMF sensors. The …

Using Regression-Based Effect Size Meta-Analysis To Investigate Coral Responses To Climate Change, Niklas Alexander Kornder

HCNSO Student Theses and Dissertations

Attempts to quantify the effects of ocean acidification and warming (OAW) on scleractinian corals provide a growing body of response measurements. However, placing empirical results into an ecological context is challenging, owing to variations that reflect both natural heterogeneity and scientific bias. This study addresses the heterogeneity of climate change induced changes in coral recruitment and calcification. To discern scientific bias and identify drivers of the remaining heterogeneity, 100 publications were analyzed using a combination of weighted mixed effects meta-regression and factorial effect size meta‑analysis. A linear model was applied to quantify the variation caused by differing stress levels across …

Quantifying The Top-Down Effects Of Grazers On A Rocky Shore: Selective Grazing And The Potential For Competition, Diana Lascala-Gruenewald, Luke Miller, Matthew Bracken, Bengt Allen, Mark Denny

Faculty Publications, Biological Sciences

The effect of grazers on the diversity, distribution, and composition of their principal food source has rarely been described for the high intertidal zone of rocky shores, a model system for studying the potential effects of climate change. Along rocky, wave-swept shores in central California, the microphytobenthos (MPB) supports diverse assemblages of limpets and littorine snails, which, at current benign temperatures, could potentially partition food resources in a complementary fashion, thereby enhancing secondary productivity. Two limpet species in particular, Lottia scabra and L. austrodigitalis, may partition components of the MPB, and are likely to affect the composition of the …

A Practical Application Of Reduced-Copper Antifouling Paint In Marine Biological Research, Andrea S Jerabek, Kara R Wall, Christopher D Stallings

Marine Science Faculty Publications

Biofouling of experimental cages and other field apparatuses can be problematic for scientists and has traditionally been addressed using frequent manual removal (e.g., scraping, scrubbing). Recent environmental restrictions and legislative changes have driven the development of less hazardous antifouling products, making antifouling paint a potential alternative option to manual removal. Consequently, the viability of using these newly developed products as a replacement for the manual cleaning of exclusion cages was experimentally investigated. There were six treatments tested, comprising three with settlement tiles in experimental cages coated with antifouling paint, two with settlement tiles in unpainted experimental cages, and one cage-free …

Host-Parasite Relationships Between The Copepod Naobranchia Lizae And Its Host (Striped Mullet, Mugil Cephalus): A Description Of Morphological Development, Sara R. Teemer

DePaul Discoveries

The parasitic copepod, Naobranchia lizae, is often found within the gill arches of the striped mullet, Mugil cephalus, in the Charleston Harbor Estuarine System of South Carolina. The parasite is relatively common, but little is known about its early stages of development. In order to describe the developmental stages and pattern of morphological development, 221 female N. lizae that were collected between February 2002 and May 2003 were used. Using variation in morphological characters (maxilla, trunk), these parasites were assigned to developmental stages (juvenile, subadult, adult). A small number of the males (three ‘dwarf’ males) were also found …

The Growth Response Of Two Diatom Species To Atmospheric Dust From The Last Glacial Maximum, Tim M. Conway, Linn J. Hoffmann, Eike Breitbarth, Robert F. Strzepek, Eric W. Wolff

Marine Science Faculty Publications

Relief of iron (Fe) limitation in the surface Southern Ocean has been suggested as one driver of the regular glacial-interglacial cycles in atmospheric carbon dioxide (CO2). The proposed cause is enhanced deposition of Fe-bearing atmospheric dust to the oceans during glacial intervals, with consequent effects on export production and the carbon cycle. However, understanding the role of enhanced atmospheric Fe supply in biogeochemical cycles is limited by knowledge of the fluxes and 'bioavailability' of atmospheric Fe during glacial intervals. Here, we assess the effect of Fe fertilization by dust, dry-extracted from the Last Glacial Maximum portion of the EPICA Dome …

Biofouling Management In The Pacific Northwest And Predation On Native Versus Non-Native Ascidians, Erin Suzanne Kincaid

Dissertations and Theses

Marine non-native species threaten economic and environmental health, making it crucial to understand factors that make them successful. Research on these species, therefore, allows for greater preparedness and informed management of biological invasions and increases understanding of elements structuring biological communities. Among the marine non-native species, and particularly the fouling community, non-native ascidians are a taxon of particular concern because they can crowd out native benthic species and smother mariculture products. This thesis addresses management for ascidians and other fouling organisms and includes research on the invasiveness of this taxon in addition to the invasibility of recipient fouling communities. On …

Automated Detection Of Deep-Sea Animals, Dallas J. Hollis, Duane Edgington, Danelle Cline

STAR Program Research Presentations

The Monterey Bay Aquarium Research Institute routinely deploys remotely operated underwater vehicles equipped with high definition cameras for use in scientific studies. Utilizing a video collection of over 22,000 hours and the Video Annotation and Reference System, we have set out to automate the detection and classification of deep-sea animals. This paper serves to explore the pitfalls of automation and suggest possible solutions to automated detection in diverse ecosystems with varying field conditions. Detection was tested using a saliency-based neuromorphic selective attention algorithm. The animals that were not detected were then used to tune saliency parameters. Once objects are detected, …

Telonicher Marine Laboratory, Hsu Telonicher Marine Laboratory

Newsletters

No abstract provided.