Terrestrial and Aquatic Ecology Commons^™

Abert’S Squirrel Management In Support Of Endangered Mount Graham Red Squirrel Recovery In Arizona, Aaron R. Morehead, Christopher Carillo, Holly Hicks, Wade Sanders, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

Recovery of the endangered Mount Graham red squirrel (MGRS) will likely be long and challenging. Its limited habitat, isolation to Pinaleño Mountain range, and demographic characteristics restrict its ability to rebound quickly from threats that impact both the squirrel and its habitat. Currently, threats to the MGRS include habitat degradation and loss through high-severity wildfire, fire suppression activities, insect outbreaks, climate change, and human development, and predation, as well as competition with Abert’s squirrels. The most recent wildfire in 2017 impacted over 48,000 acres of already reduced habitat. A critical first step is to protect and manage the remaining population …

Migratory Movements And Home Ranges Of Geographically Distinct Wintering Populations Of A Soaring Bird, Ryo Ogawa, J. Brian Davis, D. Tommy King, L. Wes Burger, Bronson K. Strickland, Marsha A. Sovada, Guiming Wang, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Migratory soaring birds exhibit spatiotemporal variation in their circannual movements. Nevertheless, it remains uncertain how different winter environments affect the circannual movement patterns of migratory soaring birds. Here, we investigated annual movement strategies of American white pelicans Pelecanus erythrorhynchos (hereafter, pelican) from two geographically distinct wintering grounds in the Southern and Northern Gulf of Mexico (GOM).We hypothesized that hourly movement distance and home range size of a soaring bird would differ between different geographic regions because of different thermals and wind conditions and resource availability. We calculated average and maximum hourly movement distances and seasonal home ranges of GPS-tracking pelicans. …

Invasive Rodent Responses To Experimental And Natural Hurricanes With Implications For Global Climate Change, Aaron B. Shiels, Gabriela E. Ramírez De Arellano, Laura Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Hurricanes cause dramatic changes to forests by opening the canopy and depositing debris onto the forest floor. How invasive rodent populations respond to hurricanes is not well understood, but shifts in rodent abundance and foraging may result from scarce fruit and seed resources that follow hurricanes. We conducted studies in a wet tropical forest in Puerto Rico to better understand how experimental (canopy trimming experiment) and natural (Hurricane Maria) hurricane effects alter populations of invasive rodents (Rattus rattus [rats] and Mus musculus [mice]) and their foraging behaviors. To monitor rodent populations, we used tracking tunnels (inked and baited cards …

Improving Efficiency Of Prairie Dog Surveys By Using A Small Copter Drone, Aaron B. Shiels, J. W. Fischer, Danika Spock, Meagan Allira

United States Department of Agriculture Wildlife Services: Staff Publications

Prairie dogs are an accessible and enjoyed wildlife species in Colorado that require occasional surveys because populations can change abruptly due to plague outbreaks or human-induced control. We evaluated the use of small copter drones at four prairie dog colonies on Open Space and Mountain Parks lands, City of Boulder, to determine if this methodology improves efficiency over ground-based survey methods. We counted prairie dogs and burrows using two types of drones (DJI Matric 210 and Autel Evo II) at altitudes 100', 150', and 400' (burrows only). We recorded video and merged still images into orthomosaics prior to having USDA …

Susceptibility Of Wild Canids To Sars-Cov-2, Stephanie M. Porter, Aim E. Hartwig, Helle Bielefeldt-Ohmann, Angela M. Bosco-Lauth, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

We assessed 2 wild canid species, red foxes (Vulpes vulpes) and coyotes (Canis latrans), for susceptibility to SARS-CoV-2. After experimental inoculation, red foxes became infected and shed infectious virus. Conversely, experimentally challenged coyotes did not become infected; therefore, coyotes are unlikely to be competent hosts for SARS-CoV-2.

Throughout the COVID-19 pandemic, multiple instances of natural infections with SARS-CoV-2 have been reported in pet dogs, likely after exposure to an infected human (1–3). Domestic dogs appear to be minimally susceptible to SARS-CoV-2, as indicated by experimental inoculations resulting in reverse transcription PCR–positive samples and low titer antibody responses but no clinical …

Exploring The Value Of A Global Gene Drive Project Registry, Riley I. Taitingfong, Antoinette J. Piaggio, Cinnamon S. Bloss, Et Al.

United States Department of Agriculture Wildlife Services: Staff Publications

Recent calls to establish a global project registry before releasing any gene-drive-modified organisms (GDOs) have suggested a registry could be valuable to coordinate research, collect data to monitor and evaluate potential ecological impacts, and facilitate transparent communication with community stakeholders and the general public. Here, we report the results of a multidisciplinary expert workshop on GDO registries convened on 8–9 December 2020 involving 70 participants from 14 countries. Participants had expertise in gene drive design, conservation and population modeling, social science, stakeholder engagement, governance and regulation, international policy, and vector control; they represented 45 organizations, spanning national and local governmental …

The Effects Of Road Salt (Nacl), Predation, And Competition On The Growth And Community Interactions Of Spotted Salamanders (Ambystoma Maculatum) And Wood Frogs (Lithobates Sylvaticus), Melissa Ocampo, Catherine A. Chuirazzi, Mizuki Takahashi

Faculty Journal Articles

Road deicing salts are frequently used in northern regions of the world during the winter and early spring months. As a result, a significant portion of road runoff into surrounding aquatic habitats contains road deicing salts. Previous studies found road salt contaminations in vernal pools that pond-breeding amphibians commonly use, including spotted salamanders (Ambystoma maculatum) and wood frogs (Lithobates sylvaticus). Studies have examined the impact of road salt on both amphibian species, but to our knowledge no previous studies have examined how road salt impacts the interspecific competition between both amphibians. We hypothesized that road salt would negatively impact growth …

Why The Recognition Of Sentience Is So Important For Animal Welfare, Mark Jones

Animal Sentience

Rowan et al. (2022) provide a useful summary of the history and development of the philosophical, public, and legal recognition of animal sentience and its importance in improving the welfare of animals. Here I argue for the incorporation of the precautionary principle in sentience recognition, and the wider significance of sentience recognition to the current climate, biodiversity and human health crises.

Evaluating Exploitation Of White Crappie And Black Crappie In Three Southeast Kansas Reservoirs, Danci Lee Johnston

Graduate Theses/Dissertations

Populations of white crappie Pomoxis annularis and black crappie P. nigromaculatus were studied in three southeast Kansas reservoirs to assess exploitation and determine if current regulations were conducive for sustainable populations. Trap nets were used to sample crappie in Elk City Reservoir, Big Hill Reservoir, and Parsons City Lake. Crappie with length 210 mm and greater were tagged with FloyFD-94 tags that served as entries into a drawing for a US$300-valued reward to encourage tag reporting. Harvest and angler demographic information were collected when tags were reported. Postcard surveys and motion-sensed cameras were used in conjunction to estimate angler effort …

Assessment Of The Geographic Distribution And Tools To Assist With Conservation Of Spotted Turtles (Clemmys Guttata) In West Virginia, Joel Leal Mota

Graduate Theses, Dissertations, and Problem Reports (ETD)

Turtles are one of the most globally threatened vertebrate groups, largely due to habitat loss, commercial exploitation, climate change, disease, and invasive species. In the United States, the spotted turtle (Clemmys guttata) is among over 50 amphibian and reptile species recently petitioned to be listed under the Endangered Species Act of 1973 (ESA). The U.S. Fish and Wildlife Service subsequently determined the spotted turtle to be a candidate species for listing. Historically, spotted turtles were known to occur at a few locations in the eastern panhandle region of West Virginia. However, previous attempts to determine the distributional extent …

Evaluating Muskellunge (Esox Masquinongy) Catch-And-Release Mortality At Elevated Summer Water Temperature, Ian Taylor Booth

Graduate Theses, Dissertations, and Problem Reports (ETD)

Angling for Muskellunge (Esox masquinongy) has become widespread and increasingly popular throughout the fish’s range. Current management strategies for Muskellunge include high minimum harvest lengths (>1016mm), closed seasons, and catch-and-release regulations. Due to these strategies and angler sentiments, up to 97% of Muskellunge caught today are released by anglers assuming they will live and be caught again in the future. Previous research on catchand-release mortality in Muskellunge has suggested relatively low mortality rates (0%-5%). However, these studies were all conducted within the fish’s thermal optimum and generally at water temperatures25°C during the summer months, representing a need to evaluate …

Population Characteristics Of Three Black Bass Species In The Upper Ohio River Drainage, Levi Foster Brown

Graduate Theses, Dissertations, and Problem Reports (ETD)

In West Virginia, species of black bass are economically and ecologically important and support popular fisheries. In the state’s large, navigable river systems, recent information suggests that anglers consider these fisheries diminished relative to their historic stocks. This study sought to describe the population characteristics of Largemouth, Smallmouth, and Spotted Bass in the upper Ohio River drainage and evaluate possible management actions. Low relative abundances coupled with poor growth estimates for Largemouth and Spotted Bass suggests that a suite of environmental and anthropogenic factors may be reducing the quality of their recreational fisheries. Conversely, demographic estimates produced for Smallmouth Bass …

Spatial Heterogeneity Of Nitrogen Cycling Within And Across Freshwater Ecosystems, Erin K. Eberhard

Dissertations, Master's Theses and Master's Reports

Dinitrogen (N₂) fixation and denitrification are two nitrogen (N) cycling processes that despite differences in environmental requirements and constraints, co-occur in aquatic ecosystems. The overall goal of this dissertation was to evaluate how spatial heterogeneity of environmental variables 1) drive hot spots of N₂ fixation, denitrification rates and gene abundances in streams, 2) facilitate co-occurrence of these processes across wetland – stream – lake interfaces, and 3) affect differences in microbial community composition in streams across U.S. ecoregions. We found hot spots of both processes within 7 stream reaches in Michigan and Idaho, but rates of N …

Low-Head Dam Removal Increases Functional Diversity Of Stream Fish Assemblages, Adam Christopher Jones

Masters Theses

Despite the growing number of dam removals to date, very few have been studied to understand their impacts on stream fish communities. Despite being the most common type of dam in the U.S., an even smaller proportion of studies focus on the impacts of low-head dam removals, instead, focusing on the impacts of removal of larger dams. In this study, two previously impounded Illinois rivers were monitored to assess the impacts of low-head dam removal on the functional assemblage of stream fishes. This was accomplished by aggregating fishes into habitat and reproductive guilds, relating community changes to habitat, environmental metrics, …

Population Assignment Of Entrained Migratory Westslope Cutthroat Trout In North Idaho, Craig D. Wells

EWU Masters Thesis Collection

The Clark Fork-Pend Oreille River basin of northeastern Washington and the Idaho Panhandle historically supported a robust metapopulation of Westslope Cutthroat Trout (WCT) Oncorhynchus clarkii lewisi, a western native salmonid of high cultural and economic value. The construction of impassible hydroelectric dams and smaller in-stream barriers has prevented the return of migratory WCT to spawning tributaries, likely leading to the fragmentation of this metapopulation over the last 100 years. One such impassible barrier is Albeni Falls Dam near Newport, Washington. Completed without fish passage capabilities in 1955, Albeni Falls Dam has been of interest as a site for restoring fish …

In The News, Meredith Purintun, Rosanna M. Vail

Human–Wildlife Interactions

Items in the news.

Trico: A Novel Repellent For Preventing Deer Damage To Ornamental Shrubs, Paul D. Curtis, Brian C. Eshenaur

Human–Wildlife Interactions

Homeowners whose landscape plants are repeatedly browsed by white-tailed deer (Odocoileus virginianus; deer) desire repellent products that are effective and long-lasting. We conducted a 12-week trial from January 6 through April 5, 2021 to test the duration and efficacy of a novel deer repellent (Trico®) relative to Plantskydd®, a commonly used deer repellent, and untreated plants. We placed treated and control Japanese yew shrubs (Taxus media ‘Hicksii’) at 4 homeowner sites (Birch Hills Drive, Fairview Crescent, Pinegrove Ave., and St. Paul Blvd.) near Rochester, New York, USA, where we detected deer presence. Yews are frequently eaten …

Invasive Earthworms In The Crown Of The Continent System And Implications For Land Management, Meghan Elizabeth Scott

Graduate Student Theses, Dissertations, & Professional Papers

The United States contains invasive earthworms originating from Europe and Asia; the majority are European lumbricids. Direct introduction occurs primarily through human activity and, once established, earthworm populations are difficult to address. When exotic earthworms engage in bioturbation, they negatively alter subterranean food webs and nutrient cycling by disrupting soil layering systems. The most prominent form of physical alteration is the change and removal of the topmost organic layer. This disruption is associated with altered nitrogen and carbon cycling, as well as altered forest floor plant communities.

The Crown of the Continent ecosystem is located in southwestern Alberta, southeastern British …

Frayed Connections: How Long-Term Nitrogen Additions Disrupt Plant-Soil Interactions And The Carbon Cycle Of A Temperate Forest, Brooke A. Eastman

Graduate Theses, Dissertations, and Problem Reports (ETD)

Forests are expected to mitigate some of the negative effects of climate change by sequestering anthropogenic carbon (C) from the atmosphere, but the degree to which they drawn down C will depend on the availability of key nutrients, such as nitrogen (N). There is a fair amount of uncertainty in the future of the forest C sink, mostly owing to the fate of soil organic matter (SOM) and soil heterotrophic respiration to future conditions. In N limited systems, plants allocate a significant amount of their photosynthate belowground for the acquisition of nutrients, but under conditions of chronic N deposition, plants …

Temporal Stability Of Seagrass Extent, Leaf Area, And Carbon Storage In St. Joseph Bay, Florida: A Semi-Automated Remote Sensing Analysis, Marie Cindy Lebrasse, Blake A. Schaeffer, Megan M. Coffer, Peter J. Whitman, Richard C. Zimmerman, Victoria J. Hill, Kazi A. Islam, Jiang Li, Christopher L. Osburn

OES Faculty Publications

Seagrasses are globally recognized for their contribution to blue carbon sequestration. However, accurate quantification of their carbon storage capacity remains uncertain due, in part, to an incomplete inventory of global seagrass extent and assessment of its temporal variability. Furthermore, seagrasses are undergoing significant decline globally, which highlights the urgent need to develop change detection techniques applicable to both the scale of loss and the spatial complexity of coastal environments. This study applied a deep learning algorithm to a 30-year time series of Landsat 5 through 8 imagery to quantify seagrass extent, leaf area index (LAI), and belowground organic carbon (BGC) …

Length–Weight Relation For Seven Neotropical Freshwater Fish Species (Actinopterygii) Endemic To Central America, Justin C. Bagley, Maria Florencia Breitman, Jerald B. Johnson

Research, Publications & Creative Work

In the presently reported study, we estimated length–weight relation (LWRs) for seven species of freshwater fishes from Central America. Samples were collected using seines from 60 sites across Nicaragua, Costa Rica, and Panama during field expeditions conducted between 1997 and 2012. The fishes were preserved and transported to the lab, where their total weight (W) was measured (to nearest 0.0001 g) and standard lengths were taken (to nearest 0.01 mm). Data were collected from four livebearers (Poeciliidae), Alfaro cultratus (Regan, 1908), Phallichthys amates (Miller, 1907), Poecilia gillii (Kner, 1863), and Priapichthys annectens (Regan, 1907); the cichlids (Cichlidae), Parachromis dovii (Günther, …

Radon (222rn) As Tracer For Submarine Groundwater Discharge Investigation—Limitations Of The Approach At Shallow Wind-Exposed Coastal Settings, Michael Schubert, Jan Scholten, Matthias Kreuzburg, Eric Petermann, Mariele Lopes De Paiva, Dennis Kohler, V. Liebetrau, John Rapaglia, Michael Schlüter

Biology Faculty Publications

Mapping radon (222Rn) distribution patterns in the coastal sea is a widely applied method for localizing and quantifying submarine groundwater discharge (SGD). While the literature reports a wide range of successful case studies, methodical problems that might occur in shallow wind-exposed coastal settings are generally neglected. This paper evaluates causes and effects that resulted in a failure of the radon approach at a distinct shallow wind-exposed location in the Baltic Sea. Based on a simple radon mass balance model, we discuss the effect of both wind speed and wind direction as causal for this failure. We show that at coastal …

Editorial: Advances In Understanding Lateral Blue Carbon Export From Coastal Ecosystems, Kai Xiao, Nengwang Chen, Zhaohui Aleck Wang, Joseph James Tamborski, Damien Troy Maher, Xuan Yu

OES Faculty Publications

No abstract provided.

A Subsurface Eddy Associated With A Submarine Canyon Increases Availability And Delivery Of Simulated Antarctic Krill To Penguin Foraging Regions, K. Hudson, M. J. Oliver, J. Kohut, Michael S. Dinniman, John M. Klinck, M. A. Cimino, K. S. Bernard, H. Statscewich, W. Fraser

OES Faculty Publications

The distribution of marine zooplankton depends on both ocean currents and swimming behavior. Many zooplankton perform diel vertical migration (DVM) between the surface and subsurface, which can have different current regimes. If concentration mechanisms, such as fronts or eddies, are present in the subsurface, they may impact zooplankton near-surface distributions when they migrate to near-surface waters. A subsurface, retentive eddy within Palmer Deep Canyon (PDC), a submarine canyon along the West Antarctic Peninsula (WAP), retains diurnal vertically migrating zooplankton in previous model simulations. Here, we tested the hypothesis that the presence of the PDC and its associated subsurface eddy increases …

Arctic Stream Characteristics And Diet Analysis Choice Impact Condition And Diet Estimates Of Ninespine Stickleback (Pungitius Pungitius), Adam Kuhrt

Theses and Dissertations (Comprehensive)

Ninespine stickleback (Pungitius pungitius) are ubiquitous in circumpolar freshwaters, but their ecological role is not well understood. Little research has been conducted on the influence of environmental variables on ninespine stickleback in stream environments, and while they are understood to be generalist feeders, their diet in stream environments is equally understudied. Determining diet is difficult due to biases inherent in all standard diet analysis methods. Morphological gut-content analysis (M-GCA), DNA metabarcoding of gut contents (D-GCA), and stable isotope analysis (SIA) are currently three of the most frequently conducted diet analyses; and while combinations of these methods are commonly …

Impacts Of Changing Permafrost Conditions On Vegetation Productivity In The Northern Boreal Forest, Emily Ogden

Theses and Dissertations (Comprehensive)

Vegetation productivity across the boreal forest has increased over the past several decades. However, at a regional scale there is large variation from increased (greening) to decreased (browning) productivity and large areas with no measured change. Some of this variation can be explained by disturbances, such as wildfire, or by increased climate variability. In northern regions underlain by permafrost, the interactions between climate, disturbance, and vegetation productivity may be more complex. For my thesis, I used a time-series of ground thermal data from permafrost monitoring sites established by the Geological Survey of Canada along a latitudinal transect of the Northwest …

Revitalizing Conservation And Management Of The American Crocodile (Crocodylus Acutus) In The Dominican Republic, Robert Greco

UNF Graduate Theses and Dissertations

Crocodilian populations declined globally during the 20^th century because of overhunting and habitat loss. Some crocodilian populations have recovered recently through legal protections and habitat restoration, but the status of many crocodilian populations are still unknown because of a lack of recent data. The American crocodile (Crocodylus acutus) population in the Dominican Republic (DR) is one of these data-deficient populations, with country-wide surveys not carried out since the 1980s. From May through July 2021 we surveyed areas within DR where C. acutus is still likely residing. Our surveys yielded no crocodile sightings in Monte Cristi, suggesting that …

Histological Comparison Of Shark Dermis Across Various Ecomorphologies, Olivia Schuitema

UNF Graduate Theses and Dissertations

The integument plays essential roles in the structural support, protection, and hydrodynamic capability among fishes. Most shark skin research has been done on the external epidermal layer containing the dermal denticles, while the larger dermis layer has been mostly ignored. The dermis layer in sharks is composed of two layers, the upper stratum laxum and the lower stratum compactum, holding supportive collagen and elastin fibers. There may be morphological and compositional differences in the dermis layers across various species of sharks, although the extent of such is unknown. These potential differences may be represented by various dermal thicknesses and different …

Editorial: Fire Regimes In Desert Ecosystems: Drivers, Impacts And Changes, Eddie J. B. Van Etten, Matthew L. Brooks, Aaron C. Greenville, Glenda M. Wardle

Research outputs 2022 to 2026

Although not commonly associated with fire, many desert ecosystems across the globe do occasionally burn, and there is evidence that fire incidences are increasing, leading to altered fire regimes in this biome. The increased prevalence of megafires (wildfires > 10,000 ha in size and typically damaging) in most global biomes is linked to climate change, although those occurring in deserts have received far less attention, from both a research and policy perspective, than that of forested ecosystems (Linley et al., 2022). Understanding the drivers of desert fires, from climate to landscape patterns of hydrology and soil, and how these may be …

Connectivity Shapes Functional Diversity And Maintains Complementarity In Surf Zones On Exposed Coasts, Christopher J. Henderson, Ben L. Gilby, Andrew D. Olds, Jesse Mosman, Rod M. Connolly, Glenn Hyndes, Brendan Kelaher, Brooke Maslo, Alan Williams, Thomas A. Schlacher

Research outputs 2022 to 2026

Habitat complexity and connectivity can influence the number of species and their diversity across a landscape. For the surf zones of ocean-exposed beaches, globally one of the longest habitat interfaces, the assumed low structural complexity, and apparent homogeneity, of the sandy seafloor habitats predicts low taxonomic and functional diversity. Here, we assessed how the configuration of the seascape and the context of different beach structure functional diversity and functional niche space of fish assemblages in surf zones. We expected that beaches that were well connected with highly productive and complex estuarine and reef habitats would support a greater level of …