Open Access. Powered by Scholars. Published by Universities.®

Ecology and Evolutionary Biology Commons

Open Access. Powered by Scholars. Published by Universities.®

20,827 Full-Text Articles 34,201 Authors 6,556,222 Downloads 312 Institutions

All Articles in Ecology and Evolutionary Biology

Faceted Search

20,827 full-text articles. Page 528 of 745.

Ecological Forecasting Of Vibrio Sp. In U.S. Coastal Waters Using An Operational Platform, Bob Daniels 2015 William & Mary

Ecological Forecasting Of Vibrio Sp. In U.S. Coastal Waters Using An Operational Platform, Bob Daniels

Presentations

The Pathogens group of the NOAA Ecological Forecasting Roadmap has begun a range of efforts to monitor and predict potential pathogen occurrences in shellfish and in U.S. Coastal waters. NOAA/NCOSS along with NMFS/NWFSC have led the Pathogens group and the development of web based tools and forecasts for both Vibrio vulnificus and Vibrio parahaemolyticus. A strong relationship with FDA has allowed the team to develop forecasts that will serve U.S. shellfish harvesters and consumers. NOAA/NOS/CSDL has provided modeling expertise to help the group use the hydrodynamic models and their forecasts of physical variables that drive the ecological predictions. The NOAA/NWS/Ocean …


Inspiring A Community To Participate In Restoring The Lynnhaven River’S Water Quality (Virginia Beach, Virginia), Laurie Carroll Sorabella 2015 William & Mary

Inspiring A Community To Participate In Restoring The Lynnhaven River’S Water Quality (Virginia Beach, Virginia), Laurie Carroll Sorabella

Presentations

Ten years ago, bacteria levels in 99% of the Lynnhaven River exceeded the Department of Health’s limits for shellfish consumption. Lynnhaven River NOW is a community-based organization with a clean and healthy river as our goal. We track the area of the river that meets shellfish standards in order to measure water quality progress. We have engaged residents, the city, and partners in the restoration effort and have now improved water quality such that 42% of the river meets the stringent standards.


Re-Emergence Of The Harmful Algal Bloom Species Alexandrium Monilatum In The Chesapeake Bay: Assessing Bloom Dynamics And Potential Health Impacts, Sarah K.D. Pease, Kimberly S. Reece, Wolfgang K. Vogelbein 2015 Virginia Institute of Marine Science

Re-Emergence Of The Harmful Algal Bloom Species Alexandrium Monilatum In The Chesapeake Bay: Assessing Bloom Dynamics And Potential Health Impacts, Sarah K.D. Pease, Kimberly S. Reece, Wolfgang K. Vogelbein

Presentations

Effective management of harmful algal blooms (HABs) within a region requires an understanding of species-specific HAB spatial and temporal distributions, bloom dynamics, as well as potential health impacts. In 2007, the southern Chesapeake Bay witnessed its first blooms of the HAB species Alexandrium monilatum. Since then, A. monilatum has bloomed in the region almost annually. A. monilatum produces the toxin ‘goniodomin A’ and is suspected in local mass mortalities of oyster larvae (Crassostrea virginica) grown for aquaculture and restoration projects. Representatives from Virginia’s multimillion dollar oyster aquaculture industry recently expressed great concern over A. monilatum impacts to their businesses; field …


Diel Vertical Distribution Patterns Of Zooplankton Along The Western Antarctic Peninsula, Patricia S. Thibodeau, John A. Conroy, Deborah K. Steinberg 2015 Virginia Institute of Marine Science

Diel Vertical Distribution Patterns Of Zooplankton Along The Western Antarctic Peninsula, Patricia S. Thibodeau, John A. Conroy, Deborah K. Steinberg

Presentations

The Western Antarctic Peninsula (WAP) is a region that has undergone significant change over the past several decades due to unprecedented increases sea surface temperature and decreases in sea ice cover. The ongoing Palmer Antarctica Long-Term Ecological Research (PAL LTER) study shows that these environmental changes are significantly affecting the marine pelagic ecosystem along the WAP. The goal of this study was to analyze diel vertical distribution patterns of zooplankton along the WAP.


Efficacy Of Sediment Remediation Efforts On Pah Contaminant Flux Via Porewater Advection At The Sediment-Surface Water Interface, Julie L. Krask, Michael A. Unger, George G. Vadas, Michele A. Cochran, Aaron J. Beck 2015 Virginia Institute of Marine Science

Efficacy Of Sediment Remediation Efforts On Pah Contaminant Flux Via Porewater Advection At The Sediment-Surface Water Interface, Julie L. Krask, Michael A. Unger, George G. Vadas, Michele A. Cochran, Aaron J. Beck

Presentations

Groundwater advection at the sediment-surface water interface is an important biogeochemical mechanism controlling the transport and bioavailability of contaminants in estuaries. At sites along the Elizabeth River (VA, USA) where the subterranean environment is heavily contaminated with polycyclic aromatic hydrocarbon (PAH)-rich dense non-aqueous phase liquid (DNAPL), consideration of groundwater-surface water dynamics and associated chemical exchange is critical for effective remediation. Preliminary data suggest that porewater advection in permeable sediments at this location is controlled by a host of physical forcing mechanisms that correspond with total flow estimates of up to 15,000 centimeters/year. Here, the efficacy of sediment remediation strategies, including …


Ontogeny, Behavior, And Ecology Of The Sea Turtle "Lost Years", Kate L. Mansfield 2015 William & Mary

Ontogeny, Behavior, And Ecology Of The Sea Turtle "Lost Years", Kate L. Mansfield

Presentations

Very little is known about sea turtles during their first years at sea, a period described as the sea turtle “lost years”. Filling these data gaps required a new technological approach including the use of small, solar-powered satellite tags and novel tag attachment methods. Data from the first long-term tracks of oceanic stage "lost years" sea turtles provide new insights to early sea turtle life history and ontogeny, revolutionizing how we now perceive the sea turtle “lost years”.


Quantifying Finfish And Blue Crab Use Of Created Oyster Reefs In The Lower Chesapeake Bay, Bruce W. Pfirrmann, Rochelle D. Seitz 2015 Virginia Institute of Marine Science

Quantifying Finfish And Blue Crab Use Of Created Oyster Reefs In The Lower Chesapeake Bay, Bruce W. Pfirrmann, Rochelle D. Seitz

Presentations

Structurally complex reefs created by the eastern oyster Crassostrea virginica provide a host of ecosystem services yet have experienced significant declines, prompting extensive restoration efforts. We investigate the use of created oyster reefs in the lower Bay by mobile finfish and blue crabs with field surveys and diet analysis. The results of this study provide insight into how restoration activities influence estuarine community dynamics and the provision of ecosystem services.


Structural Complexity And Location Affect The Habitat Value Of Restored Oyster Reefs, Melissa Karp, Rochelle Seitz 2015 Virginia Institute of Marine Science

Structural Complexity And Location Affect The Habitat Value Of Restored Oyster Reefs, Melissa Karp, Rochelle Seitz

Presentations

Oyster reefs provide a suite of valuable ecosystem services, such as water filtration, nitrogen sequestration, and provision of habitat and foraging grounds. The global decline of these habitats has had negative economic and ecological impacts to coastal waters worldwide. In the Chesapeake Bay, < 1% of the historic oyster population remains and efforts to restore oyster populations and the services they provide have been increasing. Building reefs that successfully provide specific ecosystem services may require different techniques then previously used, and success may depend on reef morphology, location, and environmental conditions. Settling trays were embedded into previously restored oyster reefs that varied in their structural complexity (rugosity) in multiple rivers in the lower Chesapeake Bay. Trays were collected after 7-weeks, sorted, and species identified and weighed (ash-free dry weight) to obtain species diversity, abundance, and biomass. Species composition data was analyzed using nMDS plots, which showed that salinity was an important driver of differences in species composition. Results of an ANOVA analysis found that species diversity was significantly greater on reefs in the high-salinity rivers compared to reefs in low-salinity rivers. Total organism abundance and biomass were positively correlated with reef structural complexity measures, such as rugosity, oyster clump volume, and oyster biomass. These results suggest that more complex oyster reefs in higher salinity locations may support more diverse and productive benthic communities. This study provides insight into the driving factors that structure oyster reef communities and has important implications for oyster reef restoration design and management.


Added Value Of Combining Multiple Optical And Acoustic Instruments When Characterizing Fine-Grained Estuarine Suspensions, Grace M. Cartwright, Carl T. Friedrichs, Lawrence P. Sanford, S. Jarrell Smith 2015 Virginia Institute of Marine Science

Added Value Of Combining Multiple Optical And Acoustic Instruments When Characterizing Fine-Grained Estuarine Suspensions, Grace M. Cartwright, Carl T. Friedrichs, Lawrence P. Sanford, S. Jarrell Smith

Presentations

Various optical and acoustic instruments have specific advantages and limitations for characterizing suspensions, and when used together more information can be obtained than with one instrument alone. The LISST 100X, for example, is a powerful tool for estimating particle size distribution, but because of the inversion method used to determine the size distribution, it is difficult to distinguish two dominate populations that peak close to one another, especially among larger grain sizes. In the York River estuary, VA, additional information obtained through the deployment of a RIPScam camera system and an ADV along with the LISST 100X allowed differentiation between …


Antibiotic Effects On Microbial Communities Responsible For Greenhouse Gas Emissions, Miguel Albergaria Furtado Semedo, Bongkeun Song, Tavis Sparrer, Carl Croizer, Craig Tobias, Rebecca Phillips 2015 Virginia Institute of Marine Science

Antibiotic Effects On Microbial Communities Responsible For Greenhouse Gas Emissions, Miguel Albergaria Furtado Semedo, Bongkeun Song, Tavis Sparrer, Carl Croizer, Craig Tobias, Rebecca Phillips

Presentations

Nitrous oxide (N2O) is a powerful greenhouse gas generated by nitrification and denitrification. The goal of this project is to examine the effects of antibiotics on microbial communities responsible for N2O emissions from terrestrial and aquatic ecosystems. We conducted laboratory and mesocosm experiments in soil samples. Higher N2O production was observed in soils exposed to tetracycline. This was associated with reduction of bacterial denitrifiers abundance and enhanced fungal abundance.


Detecting And Understanding Threats To Eelgrass In The Gulf Of Maine: The Times, They Are A-Changin’, Hillary A. Neckles 2015 William & Mary

Detecting And Understanding Threats To Eelgrass In The Gulf Of Maine: The Times, They Are A-Changin’, Hillary A. Neckles

Presentations

Eelgrass forms extensive meadows in coastal and estuarine waters throughout northern New England and Atlantic Canada. Threats to ecosystem stability include indirect impacts of watershed development and direct physical alterations associated with coastal construction, boating operations, and commercial fishing. Effects of human activities are exacerbated by natural disturbances such as severe weather events and biotic, geomorphic, and climatic processes. Spatial simulation models have shown even small scale disturbances in eelgrass meadows to require decades for full recovery. However, lack of consistent trend data of sufficient duration, spatial extent, and resolution often impedes anticipating threats before management solutions become cost prohibitive. …


Impact Of Anguillicolides Crassus On American Eels (Anguilla Rostrata), Andrew Wargo, Rob Latour, Troy D. Tuckey, Wolfgang K. Vogelbein 2015 Virginia Institute of Marine Science

Impact Of Anguillicolides Crassus On American Eels (Anguilla Rostrata), Andrew Wargo, Rob Latour, Troy D. Tuckey, Wolfgang K. Vogelbein

Presentations

American eels Anguilla rostrata are infected by an introduced parasitic nematode Anguillicoloides crassus, which can cause extreme necrosis of their swimbladders, yet effects on the eel population are currently unknown. We collected 3 eel life stages (glass, elver, and yellow) and the presence of A. crassus and swimbladder damage in each eel was quantified. The preliminary data show over 60% prevalence and an even higher prevalence of damaged swimbladders.


The Relationship Between Reproduction And Mortality In Triploid Crassostrea Virginica: A Matter Of Economic Importance, Joseph L. Matt, Standish K. Allen 2015 Virginia Institute of Marine Science

The Relationship Between Reproduction And Mortality In Triploid Crassostrea Virginica: A Matter Of Economic Importance, Joseph L. Matt, Standish K. Allen

Presentations

The goal of this project is to maximize survival for commercially produced triploid Crassostrea virginica oysters in Virginia. Over the last few years, commercial oyster growers in Virginia have reported significant mortality events of triploid oysters during the spring and summer months. The summer of 2014 was the worst yet, as growers across the state reported summer mortality, most severe on the Eastern shore and in some cases as high as 85% of the crop (Karen Hudson, personal communication). Surviving oysters from some of these mortality events were sent to the Virginia Institute of Marine Science and several of the …


Living Shorelines: A Novel Remedial Approach For Contaminated Sediments, Christian Hauser 2015 William & Mary

Living Shorelines: A Novel Remedial Approach For Contaminated Sediments, Christian Hauser

Presentations

From 1926 to 1986, the former Lordship Gun Club, located on Long Island Sound in Stratford, Connecticut, was operated as a trap and skeet shooting facility, which resulted in the discharge of lead shot into surrounding waters and sediments. Between 1987 and 2000, studies were conducted to inform remedial decision-making; remediation occurred in several phases from 2000 to 2011. Remedial action involved excavation of shot-containing sediments and associated vegetation from the intertidal zone, lead shot extraction from excavated sediments, and replacement of sediments to their native locations. Subsequent monitoring has revealed that this action destabilized intertidal sediments and led to …


A Tail Of Two Phages: Genomic And Functional Analysis Of Listeria Monocytogenes Phages Vb_Lmos_188 And Vb_Lmos_293 Reveal The Receptor-Binding Proteins Involved In Host Specificity, Aidan Casey, Kieran Jordan, Horst Neve, Aidan Coffey, Olivia McAuliffe 2015 Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland; Department of Biological Sciences,Cork Institute of Technology

A Tail Of Two Phages: Genomic And Functional Analysis Of Listeria Monocytogenes Phages Vb_Lmos_188 And Vb_Lmos_293 Reveal The Receptor-Binding Proteins Involved In Host Specificity, Aidan Casey, Kieran Jordan, Horst Neve, Aidan Coffey, Olivia Mcauliffe

Department of Biological Sciences Publications

The physical characteristics of bacteriophages establish them as viable candidates for downstream development of pathogen detection assays and biocontrol measures. To utilize phages for such purposes, a detailed knowledge of their host interaction mechanisms is a prerequisite. There is currently a wealth of knowledge available concerning Gram-negative phage-host interaction, but little by comparison for Gram-positive phages and Listeria phages in particular. In this research, the lytic spectrum of two recently isolated Listeria monocytogenes phages (vB_LmoS_188 and vB_LmoS_293) was determined, and the genomic basis for their observed serotype 4b/4e host-specificity was investigated using comparative genomics. The late tail genes of these …


Temporal Variation In Optical Properties Of Chromophoric Dissolved Organic Matter (Cdom) In Southern California Coastal Waters With Nearshore Kelp And Seagrass, Catherine D. Clark, Warren J. De Bruyn, Paige Aiona 2015 Chapman University

Temporal Variation In Optical Properties Of Chromophoric Dissolved Organic Matter (Cdom) In Southern California Coastal Waters With Nearshore Kelp And Seagrass, Catherine D. Clark, Warren J. De Bruyn, Paige Aiona

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Optical properties of chromophoric dissolved organic matter (CDOM) were measured in surf zone waters in diurnal field studies at a Southern California beach with nearshore kelp and seagrass beds and intertidal plant wrack. Absorption coefficients (aCDOM(300 nm)) ranged from 0.35 m21 to 3.7 m21 with short-term variability<1 h, increases at ebb and flood tides and higher values (6 m21) during an offshore storm event. Spectral slopes (S) ranged from 0.0028 nm21 to 0.017 nm21, with higher values after the storm; S was generally inversely correlated with aCDOM(300 nm). 3-D excitation–emission matrix spectra (EEMs) for samples with lower S values had humic-type peaks associated with terrestrial material (A, C), marine microbial material (M) and protein peaks, characteristic of freshly produced organic material. Samples with high S values had no or reduced protein peaks, consistent with aged material. Fluorescent indexes (f450/f500 >2.5, BIX>1.1) were consistent with microbial aquatic sources. Leachates of senescent kelp and seagrass had protein and humic-type EEM peaks. After solar simulator irradiation (4 h), protein peaks rapidly photochemically degraded, humic-type peak C increased in intensity and peak M disappeared. Optical characteristics of kelp leachates were most similar to field samples, …


Mapping The Movement Of Overwintering Western Monarch Butterflies (Danaus Plexippus) At The Pismo Beach Monarch Butterfly Grove Using Arcgis Software, Brett Johnson, Jesse Wycko, Daniel Goldthwaite, Tyler Brown 2015 Cal Poly, SLO

Mapping The Movement Of Overwintering Western Monarch Butterflies (Danaus Plexippus) At The Pismo Beach Monarch Butterfly Grove Using Arcgis Software, Brett Johnson, Jesse Wycko, Daniel Goldthwaite, Tyler Brown

Symposium

Dr. Villablanca of the Cal Poly Biology Department commissioned this project with the goal of tracking Monarch Butterfly spatial redistribution in anticipation of or response to severe weather events. We believe that Monarchs cluster non-preferentially on introduced Eucalyptus trees until midwinter when they begin to cluster preferentially on native conifers. Based on the efforts of a previous group of students, it has been deter- mined that, over a two-week time period in mid-winter, Monarchs spend the majority of their time on native conifers. We set out to clearly demonstrate Monarch Butterfly spatial redistribution in either anticipation of or response to …


Evolution Practice 2, IMSA Biology Team 2015 Illinois Math and Science Academy

Evolution Practice 2, Imsa Biology Team

Evolution

Evolution Problems


Crash Course Evolution Videos Bibliography, IMSA Biology Team 2015 Illinois Math and Science Academy

Crash Course Evolution Videos Bibliography, Imsa Biology Team

Evolution

No abstract provided.


Genetic Drift Simulation, IMSA Biology Team 2015 Illinois Math and Science Academy

Genetic Drift Simulation, Imsa Biology Team

Evolution

Genetic drift can be defined as a random fluctuation in gene frequency. More specifically, it tells us that different alleles may increase or decrease in a population in proportion to one another over time, just by chance, rather than due to any fitness advantage.


Digital Commons powered by bepress