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Development Of Nucleic Acid Diagnostics For Targeted And Non-Targeted Biosensing, Christopher William Smith 2022 University at Albany, State University of New York

Development Of Nucleic Acid Diagnostics For Targeted And Non-Targeted Biosensing, Christopher William Smith

Legacy Theses & Dissertations (2009 - 2024)

The field of nucleic acid technology is rapidly expanding with new impactful discoveriesbeing made each year. Starting from the discovery of the double-helix structure, cloning, gene editing, polymerase chain reaction (PCR), CRISPR technology, and even the late mRNA vaccines; nucleic acid technology is at the forefront of improving medicine. Nucleic acid technology is extremely versatile due to its easy programmability, automated cheap synthesis, and even its catalog for numerous chemical modifications that can be used to alter structure stability. For example, the number of permutations that can be made with DNA just by altering the code for adenine (A), cytosine …


Probabilistic Forecasting Of Winter Mixed Precipitation Types In New York State Utilizing A Random Forest, Brian Chandler Filipiak 2022 University at Albany, State University of New York

Probabilistic Forecasting Of Winter Mixed Precipitation Types In New York State Utilizing A Random Forest, Brian Chandler Filipiak

Legacy Theses & Dissertations (2009 - 2024)

Operational forecasters face a plethora of challenges when making a forecast; they must consider multiple data sources ranging from radar and satellites to surface and upper air observations, to numerical weather prediction output. Forecasts must be done in a limited window of time, which adds an additional layer of difficulty to the task. These challenges are exacerbated by winter mixed precipitation events where slight differences in thermodynamic profiles or changes in terrain create different precipitation types across small areas. In addition to being difficult to forecast, mixed precipitation events can have large-scale impacts on our society.


Towards Reinterpreting Neural Topic Models Via Composite Activations, Jia Peng LIM, Hady Wirawan LAUW 2022 Singapore Management University

Towards Reinterpreting Neural Topic Models Via Composite Activations, Jia Peng Lim, Hady Wirawan Lauw

Research Collection School Of Computing and Information Systems

Most Neural Topic Models (NTM) use a variational auto-encoder framework producing K topics limited to the size of the encoder’s output. These topics are interpreted through the selection of the top activated words via the weights or reconstructed vector of the decoder that are directly connected to each neuron. In this paper, we present a model-free two-stage process to reinterpret NTM and derive further insights on the state of the trained model. Firstly, building on the original information from a trained NTM, we generate a pool of potential candidate “composite topics” by exploiting possible co-occurrences within the original set of …


Biasfinder: Metamorphic Test Generation To Uncover Bias For Sentiment Analysis Systems, Muhammad Hilmi ASYROFI, Zhou YANG, IMAM NUR BANI YUSUF, Hong Jin KANG, Thung Ferdian, David LO 2022 Singapore Management University

Biasfinder: Metamorphic Test Generation To Uncover Bias For Sentiment Analysis Systems, Muhammad Hilmi Asyrofi, Zhou Yang, Imam Nur Bani Yusuf, Hong Jin Kang, Thung Ferdian, David Lo

Research Collection School Of Computing and Information Systems

Artificial intelligence systems, such as Sentiment Analysis (SA) systems, typically learn from large amounts of data that may reflect human bias. Consequently, such systems may exhibit unintended demographic bias against specific characteristics (e.g., gender, occupation, country-of-origin, etc.). Such bias manifests in an SA system when it predicts different sentiments for similar texts that differ only in the characteristic of individuals described. To automatically uncover bias in SA systems, this paper presents BiasFinder, an approach that can discover biased predictions in SA systems via metamorphic testing. A key feature of BiasFinder is the automatic curation of suitable templates from any given …


Hard-Real-Time Computing Performance In A Cloud Environment, Alvin Cornelius Murphy 2022 Old Dominion University

Hard-Real-Time Computing Performance In A Cloud Environment, Alvin Cornelius Murphy

Engineering Management & Systems Engineering Theses & Dissertations

The United States Department of Defense (DoD) is rapidly working with DoD Services to move from multi-year (e.g., 7-10) traditional acquisition programs to a commercial industrybased approach for software development. While commercial technologies and approaches provide an opportunity for rapid fielding of mission capabilities to pace threats, the suitability of commercial technologies to meet hard-real-time requirements within a surface combat system is unclear. This research establishes technical data to validate the effectiveness and suitability of current commercial technologies to meet the hard-real-time demands of a DoD combat management system. (Moreland Jr., 2013) conducted similar research; however, microservices, containers, and container …


Identification Of Factors Contributing To Traffic Crashes By Analysis Of Text Narratives, Cristian D. Arteaga-Sanchez 2022 University of Nevada, Las Vegas

Identification Of Factors Contributing To Traffic Crashes By Analysis Of Text Narratives, Cristian D. Arteaga-Sanchez

UNLV Theses, Dissertations, Professional Papers, and Capstones

The fatalities, injuries, and property damage that result from traffic crashes impose a significant burden on society. Current research and practice in traffic safety rely on analysis of quantitative data from crash reports to understand crash severity contributors and develop countermeasures. Despite advances from this effort, quantitative crash data suffers from drawbacks, such as the limited ability to capture all the information relevant to the crashes and the potential errors introduced during data collection. Crash narratives can help address these limitations, as they contain detailed descriptions of the context and sequence of events of the crash. However, the unstructured nature …


A Mechanically Intelligent Hosing-Drone, Blake Hament 2022 University of Nevada, Las Vegas

A Mechanically Intelligent Hosing-Drone, Blake Hament

UNLV Theses, Dissertations, Professional Papers, and Capstones

This manuscript presents a ”mechanically intelligent” approach to designing a Hosing-Drone for heavy-duty pressure washing. Spraying a hose creates strong reaction forces and torques. Previously demonstrated spraying robots are over-engineered to be very massive with huge inertias. These high inertias ”wash out” the reaction from the spraying. In the proposed approach, the contributions from all observable fluid dynamics, fluid structure interactions, and aerodynamics are studied individually and for the coupled system. Experimental data is collected and fit to dynamic models. These models are used to design a smaller, lighter, more agile vehicle than has been previously demonstrated. An impedance controller …


Wildfire Spread Prediction Using Attention Mechanisms In U-Net, Kamen Haresh Shah, Kamen Haresh Shah 2022 Calpoly

Wildfire Spread Prediction Using Attention Mechanisms In U-Net, Kamen Haresh Shah, Kamen Haresh Shah

Master's Theses

An investigation into using attention mechanisms for better feature extraction in wildfire spread prediction models. This research examines the U-net architecture to achieve image segmentation, a process that partitions images by classifying pixels into one of two classes. The deep learning models explored in this research integrate modern deep learning architectures, and techniques used to optimize them. The models are trained on 12 distinct observational variables derived from the Google Earth Engine catalog. Evaluation is conducted with accuracy, Dice coefficient score, ROC-AUC, and F1-score. This research concludes that when augmenting U-net with attention mechanisms, the attention component improves feature suppression …


The Role Of Generative Adversarial Networks In Bioimage Analysis And Computational Diagnostics., Ahmed Naglah 2022 University of Louisville

The Role Of Generative Adversarial Networks In Bioimage Analysis And Computational Diagnostics., Ahmed Naglah

Electronic Theses and Dissertations

Computational technologies can contribute to the modeling and simulation of the biological environments and activities towards achieving better interpretations, analysis, and understanding. With the emergence of digital pathology, we can observe an increasing demand for more innovative, effective, and efficient computational models. Under the umbrella of artificial intelligence, deep learning mimics the brain’s way in learn complex relationships through data and experiences. In the field of bioimage analysis, models usually comprise discriminative approaches such as classification and segmentation tasks. In this thesis, we study how we can use generative AI models to improve bioimage analysis tasks using Generative Adversarial Networks …


Wordmuse, John M. Nelson 2022 California Polytechnic State University, San Luis Obispo

Wordmuse, John M. Nelson

Computer Science and Software Engineering

Wordmuse is an application that allows users to enter a song and a list of keywords to create a new song. Built on Spotify's API, this project showcases the fusion of music composition and artificial intelligence. This paper also discusses the motivation, design, and creation of Wordmuse.


Multi-Relation Extraction Via A Global-Local Graph Convolutional Network, Harry CHENG, Lizi LIAO, Linmei HU, Liqiang NIE 2022 Shandong University

Multi-Relation Extraction Via A Global-Local Graph Convolutional Network, Harry Cheng, Lizi Liao, Linmei Hu, Liqiang Nie

Research Collection School Of Computing and Information Systems

Relation extraction (RE) extracts the semantic relations among entities in a sentence, which converts the unstructured text into structured and easy-to-understand information. Although RE has been studied over decades, it still faces two kinds of research challenges that are not well addressed thus far: 1) joint consideration of the global sentence structure and the local entity interaction, and 2) effective solution to the overlapping triplets within the same sentence. To tackle these issues, in this paper, we present globallocal graph-based convolutional network towards multi-relation extraction, GAME for short. In particular, we devise two layers of graph convolutional network (GCN) with …


Predicting Startup Success Using Publicly Available Data, Emily Gavrilenko 2022 California Polytechnic State University, San Luis Obispo

Predicting Startup Success Using Publicly Available Data, Emily Gavrilenko

Master's Theses

Predicting the success of an early-stage startup has always been a major effort for investors and venture funds. Statistically, there are about 305 million total startups created in a year, but less than 10% of them succeed to become profitable businesses. Accurately identifying the signs of startup growth is the work of countless investors, and in recent years, research has turned to machine learning in hopes of improving the accuracy and speed of startup success prediction.

To learn about a startup, investors have to navigate many different internet sources and often rely on personal intuition to determine the startup’s potential …


Fiscal And Monetary Policy Interactions In A Developing Economy: A Dsge-Based Evidence From Nigeria, Queen E. Oye, Philip O. Alege 2022 Department of Economics and Development Studies, Covenant University, Nigeria.

Fiscal And Monetary Policy Interactions In A Developing Economy: A Dsge-Based Evidence From Nigeria, Queen E. Oye, Philip O. Alege

CBN Journal of Applied Statistics (JAS)

This study characterizes the nature of fiscal-monetary interaction in Nigeria and gauges its macroeconomic effects by estimating a New Keynesian Dynamic Stochastic General Equilibrium (NK DSGE) model. Two policy simulations were also conducted. The first experiment considers the desirable active-passive policy mix while the second experiment ranks alternative monetary policy rules among the differing objectives of price, output and exchange rate stabilization. The study finds that fiscal and monetary policies interact as complements in an active monetary and passive fiscal policy mix over the sample period. The result from the first policy simulation reveals that the active monetary and passive …


Expressiveness Of Real-Time Motion Captured Avatars Influences Perceived Animation Realism And Perceived Quality Of Social Interaction In Virtual Reality, Alan D. Fraser, Isabella Branson, Ross C. Hollett, Craig P. Speelman, Shane L. Rogers 2022 Edith Cowan University

Expressiveness Of Real-Time Motion Captured Avatars Influences Perceived Animation Realism And Perceived Quality Of Social Interaction In Virtual Reality, Alan D. Fraser, Isabella Branson, Ross C. Hollett, Craig P. Speelman, Shane L. Rogers

Research outputs 2022 to 2026

Using motion capture to enhance the realism of social interaction in virtual reality (VR) is growing in popularity. However, the impact of different levels of avatar expressiveness on the user experience is not well understood. In the present study we manipulated levels of face and body expressiveness of avatars while investigating participant perceptions of animation realism and interaction quality when disclosing positive and negative experiences in VR. Moderate positive associations were observed between perceptions of animation realism and interaction quality. Post-experiment questions revealed that many of our participants (approximately 40 %) indicated the avatar with the highest face and body …


Synthetic Data Generation For Intelligent Inspection Of Structural Environments, Noshin Habib 2022 University of Texas at El Paso

Synthetic Data Generation For Intelligent Inspection Of Structural Environments, Noshin Habib

Open Access Theses & Dissertations

Automated detection of cracks and corrosion in pavements and industrial settings is essential to a cost-effective approach to maintenance. Deep learning has paved the path for vast levels of improvement in the area. Such models require a plethora of data with accurate ground truth and enough variation for the model to generalize to the data, which is notwidely available. There has been recent progress in computer graphics being used for the creation of synthetic data to address the issue of deficient data availability, but it is limited to specific objects, such as cars and human beings. Textures and deformities within …


Machine Learning For Early Detection Of Pediatric Sepsis, Glory Manson-Endeboh 2022 University of Arkansas, Fayetteville

Machine Learning For Early Detection Of Pediatric Sepsis, Glory Manson-Endeboh

Graduate Theses and Dissertations

Sepsis is a host response to infection in both adults and children. It contributes to approximately 1.7 million cases annually with nearly 270,000 annual deaths in the United States. In the United States, the financial burden of sepsis on survivors and their families including the hospitals is over $4.8 billion, at approximately $64,280 per hospitalization. The first goal of this thesis research is to develop efficient machine learning models to predict pediatric sepsis accurately for inpatients. The second objective is to develop machine learning methods to determine how early sepsis can be detected to mitigate mortality. We examine data collected …


Identity Term Sampling For Measuring Gender Bias In Training Data, Nasim Sobhani, Sarah Jane Delany 2022 Technological University Dublin

Identity Term Sampling For Measuring Gender Bias In Training Data, Nasim Sobhani, Sarah Jane Delany

Conference Papers

Predictions from machine learning models can reflect biases in the data on which they are trained. Gender bias has been identified in natural language processing systems such as those used for recruitment. The development of approaches to mitigate gender bias in training data typically need to be able to isolate the effect of gender on the output to see the impact of gender. While it is possible to isolate and identify gender for some types of training data, e.g. CVs in recruitment, for most textual corpora there is no obvious gender label. This paper proposes a general approach to measure …


Divide-And-Conquer Distributed Learning: Privacy-Preserving Offloading Of Neural Network Computations, Lewis C.L. Brown 2022 University of Arkansas, Fayetteville

Divide-And-Conquer Distributed Learning: Privacy-Preserving Offloading Of Neural Network Computations, Lewis C.L. Brown

Graduate Theses and Dissertations

Machine learning has become a highly utilized technology to perform decision making on high dimensional data. As dataset sizes have become increasingly large so too have the neural networks to learn the complex patterns hidden within. This expansion has continued to the degree that it may be infeasible to train a model from a singular device due to computational or memory limitations of underlying hardware. Purpose built computing clusters for training large models are commonplace while access to networks of heterogeneous devices is still typically more accessible. In addition, with the rise of 5G networks, computation at the edge becoming …


Data-Driven Deep Learning-Based Analysis On Thz Imaging, Haoyan Liu 2022 University of Arkansas, Fayetteville

Data-Driven Deep Learning-Based Analysis On Thz Imaging, Haoyan Liu

Graduate Theses and Dissertations

Breast cancer affects about 12.5% of women population in the United States. Surgical operations are often needed post diagnosis. Breast conserving surgery can help remove malignant tumors while maximizing the remaining healthy tissues. Due to lacking effective real-time tumor analysis tools and a unified operation standard, re-excision rate could be higher than 30% among breast conserving surgery patients. This results in significant physical, physiological, and financial burdens to those patients. This work designs deep learning-based segmentation algorithms that detect tissue type in excised tissues using pulsed THz technology. This work evaluates the algorithms for tissue type classification task among freshly …


Enhancing Literacy Education With Narrative Richness In The Metaverse, Fiona Fui-hoon NAH, Daniel Jiandong SHEN, Umawathy TECHANAMURTHY 2022 Singapore Management University

Enhancing Literacy Education With Narrative Richness In The Metaverse, Fiona Fui-Hoon Nah, Daniel Jiandong Shen, Umawathy Techanamurthy

Research Collection School Of Computing and Information Systems

Through an education-centric metaverse learning application, this research aims to assess the use of narrative richness to deliver media, language, and sustainability literacy education. The 21st-century learning needs require teaching and learning resources to be shared and managed more effectively across institutions. The use of metaverse features can help to manage varying narrative richness to boost learning reflection and attitude. Despite its potential, it is unclear how narrative richness in the metaverse can enhance teaching and learning. The study proposed in this research, which includes institutions from four Asian countries, is driven by this knowledge and evidence gap. Module leaders …


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