A Genome-Wide Association Study And Genomic Prediction For Phakopsora Pachyrhizi Resistance In Soybean,
2023
University of Arkansas, Fayetteville
A Genome-Wide Association Study And Genomic Prediction For Phakopsora Pachyrhizi Resistance In Soybean, Haizheng Xiong, Yilin Chen, Yong-Bao Pan, Jinshe Wang, Weiguo Lu, Ainong Shi
Horticulture Faculty Publications and Presentations
Soybean brown rust (SBR), caused by Phakopsora pachyrhizi, is a devastating fungal disease that threatens global soybean production. This study conducted a genome-wide association study (GWAS) with seven models on a panel of 3,082 soybean accessions to identify the markers associated with SBR resistance by 30,314 high quality single nucleotide polymorphism (SNPs). Then five genomic selection (GS) models, including Ridge regression best linear unbiased predictor (rrBLUP), Genomic best linear unbiased predictor (gBLUP), Bayesian least absolute shrinkage and selection operator (Bayesian LASSO), Random Forest (RF), and Support vector machines (SVM), were used to predict breeding values of SBR resistance using …
Influence Of Cover Crops On Soybean Yield And Partial Returns As An Alternative To Double-Crop Soybean In Arkansas,
2023
University of Arkansas, Fayetteville
Influence Of Cover Crops On Soybean Yield And Partial Returns As An Alternative To Double-Crop Soybean In Arkansas, Drew Kirkpatrick, Trenton L. Roberts, Kris Brye, Jeremy Ross
Crop, Soil and Environmental Sciences Faculty Publications and Presentations
The number of hectares dedicated to winter wheat (Triticum aestivum L.) in the southern United States has been trending downward for almost a decade, presenting an opportunity for producers to utilize alternatives in their soybean [Glycine max (L.) Merr.] rotations, such as winter cover crops. A study was established to compare the cover crops to traditional cropping systems by determining the effect each had on a successive soybean crop and to examine partial economic returns. Cropping systems implemented were winter fallow, winter wheat, and seven cover crop treatments, including cereal rye (Secale cereale L.), black-seeded oat ( …
Evaluating Planting Green And Herbicides For Integrated Weed Management And Their Effect On Soil Properties In Corn And Soybean In Nebraska,
2023
University of Nebraska-Lincoln
Evaluating Planting Green And Herbicides For Integrated Weed Management And Their Effect On Soil Properties In Corn And Soybean In Nebraska, Trey Parker Stephens
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Producers across the Midwest are finding new ways to implement cover crops into cropping systems and the practice of “Planting Green” is one of the newest uses of cover crops. When planting green, producers plant their row crops into actively growing cover crops and terminate the cover crop at time of planting or shortly after planting. This practice would allow for higher biomass accumulation of the cover crop and could aid in weed management of herbicide-resistant weeds. The objective of the first two studies was to evaluate planting green and its effect on soil-applied residual herbicides, weed management, dicamba/glyphosate-resistant soybean …
Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program,
2023
University of Nebraska-Lincoln
Genomic Selection For Yield And Seed Composition Stability In An Applied Soybean Breeding Program, Benjamin Mark Harms
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Stability traits are of primary importance in plant breeding to ensure consistency in phenotype across a range of environments. However, selection efficiency and accuracy for stability traits can be hindered due to the requirement of obtaining phenotype data across multiple years and environments for proper stability analysis. Genomic selection is a method that allows prediction of a phenotype prior to observation in the field using genome-wide marker data and phenotype data from a training population. To assess prediction of stability traits, two elite-yielding soybean populations developed three years apart in the same breeding program were used. The individuals in each …
A Deep Learning Framework For Processing And Classification
Of Hyperspectral Rice Seed Images Grown Under High Day And
Night Temperatures,
2023
University of Puerto Rico
A Deep Learning Framework For Processing And Classification Of Hyperspectral Rice Seed Images Grown Under High Day And Night Temperatures, Víctor Díaz-Martínez, Jairo Orozco-Sandoval, Vidya Manian, Balpreet K. Dhatt, Harkamal Walia
Department of Agronomy and Horticulture: Faculty Publications
A framework combining two powerful tools of hyperspectral imaging and deep learning for the processing and classification of hyperspectral images (HSI) of rice seeds is presented. A seed-based approach that trains a three-dimensional convolutional neural network (3D-CNN) using the full seed spectral hypercube for classifying the seed images from high day and high night temperatures, both including a control group, is developed. A pixel-based seed classification approach is implemented using a deep neural network (DNN). The seed and pixel-based deep learning architectures are validated and tested using hyperspectral images from five different rice seed treatments with six different high temperature …
Entropy And Energy Profiles Of Chemical Reactions,
2023
Massachusetts Institute of Technology
Entropy And Energy Profiles Of Chemical Reactions, Johannes C. B. Dietschreit, Dennis J. Diestler, Rafael Gómez-Bombarelli
Department of Agronomy and Horticulture: Faculty Publications
The description of chemical processes at the molecular level is often facilitated by use of reaction coordinates, or collective variables (CVs). The CV measures the progress of the reaction and allows the construction of profiles that track the evolution of a specific property as the reaction progresses. Whereas CVs are routinely used, especially alongside enhanced sampling techniques, links between profiles and thermodynamic state functions and reaction rate constants are not rigorously exploited. Here, we report a unified treatment of such reaction profiles. Tractable expressions are derived for the free-energy, internal-energy, and entropy profiles as functions of only the CV. We …
Divergent Metabolic Changes In Rhizomes Of Lowland And
Upland Switchgrass (Panicum Virgatum) From Early Season
Through Dormancy Onset,
2023
University of Nebraska–Lincoln
Divergent Metabolic Changes In Rhizomes Of Lowland And Upland Switchgrass (Panicum Virgatum) From Early Season Through Dormancy Onset, Nathan A. Palmer, Gautam Sarath, Michael J. Bowman, Aaron J. Saathoff, Serge J. Edmé, Robert B. Mitchell, Christian M. Tobias, Soundararajan Madhavan, Erin D. Scully, Scott E. Sattler
Department of Agronomy and Horticulture: Faculty Publications
High-biomass-yielding southerly adapted switchgrasses (Panicum virgatum L.) frequently suffer from unpredictable winter hardiness at more northerly sites arising from damage to rhizomes that prevent effective spring regrowth. Previously, changes occurring over the growing season in rhizomes sampled from a cold-adapted tetraploid upland cultivar, Summer, demonstrated a role for abscisic acid (ABA), starch accumulation, and transcriptional reprogramming as drivers of dormancy onset and potential keys to rhizome health during winter dormancy. Here, rhizome metabolism of a high-yielding southerly adapted tetraploid switchgrass cultivar, Kanlow—which is a significant source of genetics for yield improvement—was studied over a growing season at a northern …
Herbicide Drift Vs. Crop Resilience – The Influence Of Micro-Rates,
2023
Maize Research Institute "Zemun Polje"
Herbicide Drift Vs. Crop Resilience – The Influence Of Micro-Rates, Milan Brankov, Bruno Canella Vieira, Miloš Rajković, Milena Simić, Vukadinović Jelena, Violeta Mandić, Vesna Dragičević
Department of Agronomy and Horticulture: Faculty Publications
A greenhouse study was conducted to test the effects of low herbicide dose exposure on different crops measuring visible damages, plant height, leaf area, and dry matter. Seven crops were tested: lettuce (Lactuca sativa L.) cv. Novosadska majska maslena, oil pumpkin (Cucurbita maxima Duch) cv. Olivija, oilseed rape (Brassica napus L.) cv. NS Ras, pepper (Capsicum annuum L.) cv. Kurtovska kapija, soybean (Glycine max (L.) Merr) cv. ZP Laura, sunflower (Helianthus annuus L.) cv. NS Kruna, and tomato (Solanum lycopersicum L.) cv. Dunavski Rubin. Herbicide dicamba in the range of 0.14 to 1 …
Soil Nutrient And Invertase-Producing Bacteria Relation Impact On Cilembu Sweet Potato (Ipomoea Batatas L.) Growth: A Study Based On Upland And Wetland Cultivation In Cilembu Village Sumedang District,
2023
Department of Soil Science and Land Resources Management, Faculty of Agriculture, Universitas Padjadjaran
Soil Nutrient And Invertase-Producing Bacteria Relation Impact On Cilembu Sweet Potato (Ipomoea Batatas L.) Growth: A Study Based On Upland And Wetland Cultivation In Cilembu Village Sumedang District, Eso Solihin, Syaiful Anwar, Dwi Andreas Santoso, Budi Nugroho, Purwono, Rija Sudirja, Haris Maulana, Nadia Nuraniya Kamaluddin, Agung Karuniawan
Jurnal Kultivasi
Environment is one important factors that must be considered in supporting sweet potato productivity. Environmental factors can be biotic and abiotic, including the availability of nutrients and microbes in the soil. This study aimed to identify the nutrient content of the soil in paddy fields and dry fields, identify the total invertase microorganisms in paddy fields and dry fields, and identify the relationship between soil nutrients and microorganisms during the growth of Cilembu sweet potato in dry and paddy fields agroecosystems. This research was conducted on dry fields and paddy fields in Cilembu Village, Sumedang Regency. The experimental design used …
Effect Of Npk And Bacillus-Coated Npk Fertilizer On Biomass, Nutrient Content In Soil And Nutrient Uptake By Lettuce,
2023
Department of Soil science, Faculty of Agriculture, Universitas Padjadjaran
Effect Of Npk And Bacillus-Coated Npk Fertilizer On Biomass, Nutrient Content In Soil And Nutrient Uptake By Lettuce, Reginawanti Hindersah, Mieke Rochimi Setiawati, Pujawati Suryatmana, Betty Natalie Fitriatin, Fasa Aditya, Gita Bina Nugraha, Rara Rahmatika Risanti, Priyanka Asmiran
Jurnal Kultivasi
The Inoculation of beneficial soil microbes is an effective method for lowering doses of inorganic fertilizers. This study was aimed to observe and compare the effect of doses and formulas of Bacillus-coated NPK (BCN) and conventional NPK fertilizers on biomass, major macro-nutrient in soil and their uptake by shoots of lettuce (Lactuca sativa L.); as well as evaluate the potency of BCN for decreasing doses of NPK fertilizers. The greenhouse experiment was set up in a randomized block design with seven treatments and five replications. The treatments included one and a half doses of recommended NPK fertilizer and two BCN …
Physiological And Canopy Temperature Responses To Drought Of Four Penstemon Species,
2023
Utah State University
Physiological And Canopy Temperature Responses To Drought Of Four Penstemon Species, Ji-Jhong Chen, Youping Sun, Kelly Kopp, Lorence R. Oki, Scott B. Jones, Lawrence Hipps
Plants, Soils, and Climate Faculty Publications
Available water for urban landscape irrigation is likely to become more limited because of inadequate precipitation and the ever-increasing water demand of a growing population. Recent droughts in the western United States have also increased the demand for low-water-use landscapes in urban areas. Penstemon species (beardtongues) are ornamental perennials commonly grown in low-water-use landscapes, but their drought tolerance has not been widely investigated. The objectives of this study were to determine the effects of water availability on the morphology, physiology, and canopy temperature of Penstemon barbatus (Cav.) Roth ‘Novapenblu’ (Rock Candy Blue® penstemon), P. digitalis Nutt. ex Sims ‘TNPENDB’ …
The Effect Of Herbicide Glufosinate Ammonium 150 G/L Dose On Several Weeds And Potatoes (Solanum Tuberosum L.) Yield,
2023
Department of Agronomy, Faculty of Agriculture, Universitas Padjadjaran
The Effect Of Herbicide Glufosinate Ammonium 150 G/L Dose On Several Weeds And Potatoes (Solanum Tuberosum L.) Yield, Denny Kurniadie, Yayan Sumekar, Chika Valent
Jurnal Kultivasi
In the last three years, potato production in Indonesia fluctuated every year. One of the factors that cause low productivity of potatoes is weed. The presence of weeds in potato planting areas can inhibit plant growth and affect potato yields. The aim of this study is to determine the effectiveness of herbicide glufosinate ammonium 150 g/L to control common weeds in potato plants. This research was conducted in a farmer field in Lebak Muncang Village, Ciwidey District, Bandung Regency, West Java Province. The experimental design used was a randomized block design with six treatments and four replications. Weed control using …
Effectiveness Of Water Hyacinth Compost And N, P, K, S Fertilizer On S-Available, S Uptake, Protein Content, And Yield Of Shallot In Inceptisols From Jatinangor,
2023
Department of Soil Science, Faculty of Agriculture, Universitas Padjadjaran
Effectiveness Of Water Hyacinth Compost And N, P, K, S Fertilizer On S-Available, S Uptake, Protein Content, And Yield Of Shallot In Inceptisols From Jatinangor, Emma Trinurani Sofyan, Fajar Akbar Gumelar, Anni Yuniarti, Benny Joy, Fiky Yulianto Wicaksono
Jurnal Kultivasi
. Water hyacinth (Eichhornia crassipes) is a source of organic matter that can be used as compost to improve the soil quality and productivity of shallots. Shallots are horticultural commodities that have various benefits. Inceptisol soils dominate Indonesia, with an area of 37.5% of Indonesia's land area but have low soil fertility. Soil fertility can be increased by optimal fertilization. This experiment aimed to determine the dose of water hyacinth compost and nitrogen (N), phosphor (P), potassium (K), sulfur (S) fertilizer which gave the best effect on increasing available S, S uptake, protein content, and yield of shallots. The experiment …
Total Soluble Solid And Titratable Acidity In Different Fruit Maturation Stages Of Solanum Lycopersicum Cv. Micro-Tom And Its Mutant Iaa9-3 And Iaa9-5,
2023
Departemen Budidaya Pertanian, Fakultas Pertanian, Universitas Padjadjaran
Total Soluble Solid And Titratable Acidity In Different Fruit Maturation Stages Of Solanum Lycopersicum Cv. Micro-Tom And Its Mutant Iaa9-3 And Iaa9-5, Zulfatunnisa, Syariful Mubarok, Kusumiyati
Jurnal Kultivasi
Fruit development influences the metabolite contents and then its biological activity; however, such report is still limited in tomato IAA9 mutants. This study aims to evaluate total soluble solid and titratable acidity in several stages of fruit maturation of the mutant micro-tom tomato. The experimental method used is the t-test method with three replications and followed by correlation and principal component analysis. The tested genotype were iaa9-3 and iaa9-5 mutants against WT-MT. Pearson correlation analysis showed that iaa9-3 and iaa9-5 produced higher levels of total soluble solid and titratable acidity in different fruit maturity levels; and the increase of flowering …
Chile Pepper Variety Evaluation And Profitability Analysis At Three Farms In Minnesota And Wisconsin, 2022,
2023
University of Minnesota - Twin Cities
Chile Pepper Variety Evaluation And Profitability Analysis At Three Farms In Minnesota And Wisconsin, 2022, Natalie Hoidal, Charlie Rohwer, Ryan Pesch, Rodrigo Cala, Javier García, Griselda Bernabe Suarez, Fernando Alejandro García Loyo
Midwest Vegetable Trial Reports
Latino fresh market vegetable farmers in Minnesota and Wisconsin are interested in growing hot peppers for local markets, both for fresh and dried pepper sales. This variety trial is the third and final trial of a 3 year project. We trialed 14 varieties of peppers representing jalapeño, serrano, habanero, poblano, and “other” types. The varieties included the top varieties from 2020 and 2021, alongside new varieties. We measured yield, fruit size, and Scoville heat units. In addition to the variety trial, we conducted an enterprise analysis to determine the profitability of hot pepper production in the Upper Midwest.
Late Postemergence Glufosinate-Based Programs For
Glyphosate-Resistant Palmer Amaranth Control In
Dicamba/Glufosinate/Glyphosate-Resistant Soybean,
2023
Cornell University
Late Postemergence Glufosinate-Based Programs For Glyphosate-Resistant Palmer Amaranth Control In Dicamba/Glufosinate/Glyphosate-Resistant Soybean, Vipan Kumar, Jatinder S. Aulakh, Rui Liu, Amit J. Jhala
Department of Agronomy and Horticulture: Faculty Publications
Glyphosate-resistant (GR) Palmer amaranth (Amaranthus palmeri S. Watson) is widespread in the Central Great Plains. Introduction of newly developed dicamba/glufosinate/glyphosate (DGG)-resistant soybean varieties allows postemergence (POST) applications of dicamba and glufosinate for in-season control of GR Palmer amaranth. Limited information exists on the effectiveness of glufosinate applied late-POST for tall (70–90 cm) GR Palmer amaranth control in DGG-resistant soybean. The objectives of this study were to (1) determine the effectiveness of late-POST glufosinate-based programs for GR Palmer amaranth control, and (2) determine the impact of those programs on soybeans grain yields. Ten glufosinatebased programs were tested in a field …
Evaluating Form And Function Of Groundcovers And Their Environmental Impacts In Louisiana Landscapes,
2023
Louisiana State University and Agricultural and Mechanical College
Evaluating Form And Function Of Groundcovers And Their Environmental Impacts In Louisiana Landscapes, Thomas Maxwell Mckeown
LSU Master's Theses
Increasing environmental concerns are encouraging the adoption of sustainable landscapes that have environmental, social, and financial benefits. Ornamental groundcover systems are touted as sustainable landscape features due to the associated decreased demand of water, fertilizer, pesticide, and maintenance; however, limited research exists on soil property effects, planting density, weed density, or consumer preferences of groundcovers. This study was aimed to gain a more thorough understanding of ornamental groundcovers systems and their environmental impacts. The effects of groundcover growth habit (matting; bunching) and irrigation delivery (micro spray; overhead) on soil temperature, volumetric water content (VWC), and electric conductivity (EC) along with …
Evaluación Y Rentabilidad De Variedades De Chile En Tres Granjas De Minnesota Y Wisconsin, 2022,
2023
University of Minnesota - Twin Cities
Evaluación Y Rentabilidad De Variedades De Chile En Tres Granjas De Minnesota Y Wisconsin, 2022, Natalie Hoidal, Charlie Rohwer, Ryan Pesch, Rodrigo Cala, Javier García, Griselda Bernabe Suarez, Fernando Alejandro García Loyo
Midwest Vegetable Trial Reports
Los agricultores latinos de hortalizas frescas de Minnesota y Wisconsin están interesados en cultivar chiles picantes tanto frescos como deshidratados para su venta en mercados locales. Este ensayo de variedades es el tercero y último de un proyecto de tres años de duración. El ensayo incluyo 14 variedades de chile incluyendo jalapeño, serrano, habanero, poblano y "otros" tipos. Las variedades incluyeron las mejores variedades de 2020 y 2021 junto con nuevas variedades. Calculamos el rendimiento, tamaño y las unidades Scoville. Además del ensayo de variedades, realizamos un análisis empresarial para determinar la rentabilidad de la producción de chiles picantes en …
A Leaf-Level Spectral Library To Support High-Throughput Plant
Phenotyping: Predictive Accuracy And Model Transfer,
2023
Mississippi State University
A Leaf-Level Spectral Library To Support High-Throughput Plant Phenotyping: Predictive Accuracy And Model Transfer, Nuwan K. Wijewardane, Huichun Zhang, Jinliang Yang, James C. Schnable, Daniel P. Schachtman, Yufeng Ge
Department of Agronomy and Horticulture: Faculty Publications
Leaf-level hyperspectral reflectance has become an effective tool for high-throughput phenotyping of plant leaf traits due to its rapid, low-cost, multi-sensing, and non-destructive nature. However, collecting samples for model calibration can still be expensive, and models show poor transferability among different datasets. This study had three specific objectives: first, to assemble a large library of leaf hyperspectral data (n=2460) from maize and sorghum; second, to evaluate two machine-learning approaches to estimate nine leaf properties (chlorophyll, thickness, water content, nitrogen, phosphorus, potassium, calcium, magnesium, and sulfur); and third, to investigate the usefulness of this spectral library for predicting external datasets …
Experimentation On Nebraska Farms For Sustaining Soil Health Management,
2023
University of Nebraska-Lincoln
Experimentation On Nebraska Farms For Sustaining Soil Health Management, Fernanda Souza Krupek
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Soil health management practices have increasingly been promoted across US agroecosystems to address many interrelated environmental and economic food system challenges. Sustaining conservation behavior – through farmer’s adoption and continued use of practices – is key for achieving many soil health-related intended social-ecological benefits. Using a range of scientific methods, from lab-based experiments to on-farm research to farmer interviews, the overall objective of this dissertation research was to explore soil and human dimension considerations to design farming and knowledge transfer systems for sustaining soil health management in the US Midwest. In a multivariate analysis of ten on-farm research sites, we …
