Agronomy and Crop Sciences Commons^™

Utilizing Random Regression Models For Genomic Prediction Of A Longitudinal Trait Derived From High‐Throughput Phenotyping, Malachy T. Campbell, Harkamal Walia, Gota Morota

Department of Agronomy and Horticulture: Faculty Publications

The accessibility of high‐throughput phenotyping platforms in both the greenhouse and field, as well as the relatively low cost of unmanned aerial vehicles, has provided researchers with an effective means to characterize large populations throughout the growing season. These longitudinal phenotypes can provide important insight into plant development and responses to the environment. Despite the growing use of these new phenotyping approaches in plant breeding, the use of genomic prediction models for longitudinal phenotypes is limited in major crop species. The objective of this study was to demonstrate the utility of random regression (RR) models using Legendre polynomials for genomic …

Identification Of Genomic Regions Contributing To Protein Accumulation In Wheat Under Well-Watered And Water Deficit Growth Conditions, Ibrahim S. Elbasyoni, Sabah M. Morsy, Raghuprakash Kastoori Ramamurthy, Atef M. Nassar

Department of Agronomy and Horticulture: Faculty Publications

Sustaining wheat production under low-input conditions through development and identifying genotypes with enhanced nutritional quality are two current concerns of wheat breeders. Wheat grain total protein content, to no small extent, determines the economic and nutritive value of wheat. Therefore, the objectives of this study are to identify accessions with high and low grain protein content (GPC) under well-watered and water-deficit growth conditions and to locate genomic regions that contribute to GPC accumulation. Spring wheat grains obtained from 2111 accessions that were grown under well-watered and water-deficit conditions were assessed for GPC using near-infrared spectroscopy (NIR). Results indicated significant influences …

Lu Horticulture Notes July 2018, Touria Eaton

LU Horticulture Notes

LU Horticulture Notes July 2018 issue provides updates on the LU Student Farming Enterprise, tips on planting and harvesting, what pests to monitor, an overview of the 2011 Federal Food Safety and Modernization Act, and more.

LU Horticulture Notes is published by Cooperative Extension and Research Program and edited by Dr. Touria Eaton, assistant professor of horticulture.

Effects Of Bacillus Mycoides Supplement In A Reduced Frequency Fungicide Program On Chambourcin Grapevines (Vitis Vinifera L.), Ryan Alan Mairs

Masters Theses & Specialist Projects

Fungal diseases pose significant challenges for grapevine producers in Kentucky due to the region’s abundant moisture and relative humidity. Methods to reduce fungicide application frequency would prove both economically and temporally valuable to producers. A field experiment was established in Bowling Green, KY in 2017 to investigate Bacillus mycoides isolate J (LifeGard) as a supplement to a fungicide program for systemic acquired resistance (SAR). Three fungicide treatment regimens were implemented consisting of a program modelled from the Midwest Fruit Pest Management Guide (2017) and an identical program supplemented with 140 g ha-1 LifeGard per application (both applied on 14 day …

Phosphorus Vs. Mycorrhiza: Mitigation Of Lead Uptake In Tomatoes, Helen Senerchia, Liz Miernicki, Andrew Margenot

PRECS 2018

This study seeks to understand how the mutualist relationship between arbuscular mycorrhizal fungi (AM) and Solanum lycopersicum (tomato) affects the uptake and distribution of iron (Pb) found in soil by tomatoes and how the effects of phosphorous (P) application may pose a trade-off between AM and P mitigation of bioavailability of Pb.

The Effects Of Fungicide And Genetics On Fungal Diseases On Wheat In Nebraska With Emphasis On Stem Rust, Javed Sidiqi

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Foliar fungal diseases of wheat (Triticum aestivum L.) pose a serious threat to wheat production. Despite the significant progress that has been made limiting major fungal diseases by developing resistant cultivars, these diseases challenge the economic sustainability of wheat production. The objectives of this research were (1) To determine the effect of fungal plant pathogens on grain yield in eastern Nebraska, released and pre-release winter wheat genotypes were studied in fungicide treated and untreated plots from 2015 to 2017. (2) To determine if Sr7b is present using allelism tests in ‘Gage’ wheat as previously hypothesized.

Sixty genotypes were planted …

Skeleton Weed Program: Annual Report To Grain Growers 2017/2018, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity published reports

The Grains, Seeds and Hay Industry Management Committee (GSHIMC) believes the current program is delivering the best value for the funding provided and is achieving the Project Outcomes of eradication (where possible), management (on infested sites), and limiting the spread of Skeleton weed across the cereal growing districts.

There has been a significant increase in the infested area of Skeleton weed in 2017/18. Most of this increase was in the eastern zone where wet conditions favoured Skeleton weed in late 2017.

Many landholders in these areas also had difficulty achieving “long term” control over summer and infested areas needed monitoring …

Bedstraw Eradication Program: Annual Report To Grain Growers 2017/2018, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity published reports

The Grains, Seeds and Hay Industry Management Committee (GSHIMC) believes the current program is delivering the best value for the funding provided and is achieving the project outcomes of containment and eradication.

Approved programs are developed annually for each infested property in consultation with GSHIMC, the Department of Primary Industries and Regional Development (DPIRD) and the landholders detailing management actions, estimated costs and timeframes of the agreed actions.

The two infested properties have now entered the final Release Phase of a nine year eradication program. The program is implemented by DPIRD and includes six consecutive years of winter spray treatments, …

Field Pea Response To Seeding Rate, Depth, And Inoculant In West-Central Nebraska, Strahinja V. Stepanovic, Charles Burr, Julie A. Peterson, Daran Rudnick, Cody F. Creech, Rodrigo Werle

West Central Research and Extension Center, North Platte

Increased market demand and larger adoption of field pea (Pisum sativum L.) in semiarid west-central Nebraska has provided opportunities to replace summer fallow and diversify crop rotations. As a relatively new crop, its response to different seeding practices has not been evaluated in this eco-region. Field pea grain yield response to seeding depth (25, 50, and 75 mm), inoculation with Rhizobium leguminosarum bv. viciae (yes and no rhizobia inoculant), and seeding rates (35, 50, 65, 75, 90, 105, and 120 plants m^–2) was investigated in 2015 and 2016 at five sites in Perkins County, NE. There were …

Salt Stress Induces Non-Cg Methylation In Coding Regions Of Barley Seedlings (Hordeum Vulgare), Moumouni Konate, Michael J. Wilkinson, Benjamin T. Mayne, Stephen M. Pederson, Eileen S. Scott, Bettina Berger, Carlos M. Rodriguez Lopez

Horticulture Faculty Publications

Salinity can negatively impact crop growth and yield. Changes in DNA methylation are known to occur when plants are challenged by stress and have been associated with the regulation of stress-response genes. However, the role of DNA-methylation in moderating gene expression in response to salt stress has been relatively poorly studied among crops such as barley. Here, we assessed the extent of salt-induced alterations of DNA methylation in barley and their putative role in perturbed gene expression. Using Next Generation Sequencing, we screened the leaf and root methylomes of five divergent barley varieties grown under control and three salt concentrations, …

Soil Science In Precision Agriculture Lesson Plan, Carson Ellis Cronkright

Agricultural Education and Communication

Due to the increasing demands for the American agricultural industry to provide exceptional products at an increasing rate of production, as well as implement the practice of sustainable farming, it is imperative that more modern concepts be taught at a younger age (Ray, 2013). In order to inform students of advancements and the future of agriculture in the United States, curriculum and lesson plans should reflect this movement in industry in order to provide relevant information and maintain the highest quality of education possible. This project will provide a constructed lesson plan as one example of adopting more progressive methods …

Radical Social Ecology As Deep Pragmatism: A Call To The Abolition Of Systemic Dissonance And The Minimization Of Entropic Chaos, Arielle Brender

Student Theses 2015-Present

This paper aims to shed light on the dissonance caused by the superimposition of Dominant Human Systems on Natural Systems. I highlight the synthetic nature of Dominant Human Systems as egoic and linguistic phenomenon manufactured by a mere portion of the human population, which renders them inherently oppressive unto peoples and landscapes whose wisdom were barred from the design process. In pursuing a radical pragmatic approach to mending the simultaneous oppression and destruction of the human being and the earth, I highlight the necessity of minimizing entropic chaos caused by excess energy expenditure, an essential feature of systems that aim …

Cloning And Characterization Of A Pyrethroid Pesticide Decomposing Esterase Gene, Est3385, From Rhodopseudomonas Palustris Psb-S, Xiangwen Luo, Deyong Zhang, Xuguo Zhou, Jiao Du, Songbai Zhang, Yong Liu

Entomology Faculty Publications

Full length open reading frame of pyrethroid detoxification gene, Est3385, contains 963 nucleotides. This gene was identified and cloned based on the genome sequence of Rhodopseudomonas palustris PSB-S available at the GneBank. The predicted amino acid sequence of Est3385 shared moderate identities (30–46%) with the known homologous esterases. Phylogenetic analysis revealed that Est3385 was a member in the esterase family I. Recombinant Est3385 was heterologous expressed in E. coli, purified and characterized for its substrate specificity, kinetics and stability under various conditions. The optimal temperature and pH for Est3385 were 35 °C and 6.0, respectively. This enzyme could …

Gwas For Fusarium Head Blight Related Traits In Winter Wheat (Triticum Aestivum L.) In An Artificially Warmed Treatment, Elisane W. Tessmann, David A. Van Sanford

Plant and Soil Sciences Faculty Publications

Global temperature increases will affect Fusarium head blight (FHB) levels in wheat (Triticum aestivum L.). A pressing question is whether current sources of resistance will be effective in a warmer environment. We evaluated phenotypic response to disease in 238 soft winter wheat breeding lines and cultivars grown in 2015–2016 and 2016–2017 under control and warmed (+3 °C) conditions. Warming was achieved with heating cables buried 3 cm in the rhizosphere. We measured heading date, plant height, yield, FHB rating, Fusarium damaged kernels (FDK), deoxynivalenol (DON), leaf blotch rating, powdery mildew rating and leaf rust rating. There were significant ( …

Nitrogen And Weed Management In Transplanted Tomato In The Nigerian Forest-Savanna Transition Zone, J. A. Adigun, O. S. Daramola, O. R. Adeyemi, P. M. Olorunmaiye, O. A. Osipitan

Haskell Agricultural Laboratory (Northeast Research and Extension Center)

Weed infestation and inherent low soil fertility are among primary reasons for low yields of tomato in Nigeria. Field trials were carried out during the wet season of 2015 and 2016 to evaluate yield response of tomato to nitrogen (N) application and weed control methods in the forest-savanna transition zone of Abeokuta, Nigeria. Positive relationship exists between growth of weed species and increase in N application. Across the years of study, increase in N up to 90 kg/ha increased weed density by 11–25%, however, the increased N gave the transplanted tomato competitive advantage and thus enhanced weed smothering. Pre-transplant application …

Sustainable Intensification Of Agriculture: Opportunities And Challenges For Food Security And Agrarian Adaptation To Environmental Change In Bangladesh, Aaron Michael Shew

Graduate Theses and Dissertations

This dissertation investigates three unique aspects of sustainable agricultural intensification (SAI) in the context of Bangladeshi rice production. The first article presents a qualitative analysis of SAI and farmer surveys in the embanked polder region of coastal Bangladesh. The second article investigates the global food security and environmental impacts of already adopted High Yielding Variety (HYV) rice and double-cropped rice systems in Bangladesh using a spatial partial equilibrium trade model and a Life Cycle Assessment (LCA). The final article demonstrates a remote sensing methodology for monitoring dry season rice production at 30 m resolution in Bangladesh using a harmonic time …

Consumers’ Willingness To Pay For Hydroponic Lettuce, Daniel Gilmour

Graduate Theses and Dissertations

With continued advances in hydroponic plant production technology, an increasing number of farms have begun using hydroponic techniques to grow leaf lettuce and other food crops in a controlled environment. Recent controversy about the ongoing inclusion of hydroponics in the USDA organic program has highlighted uncertainty about marketing for hydroponic crops. In November 2017, the National Organic Standards Board voted not to recommend that hydroponic farms be banned from applying for organic certification. Since then, continued controversy has led a group of organic producers to start an additional independent certification program that would exclude hydroponic crops. While hydroponic production may …

Irrigation Practice Adoption: Causes And Consequences In The Arkansas Delta, Kerr James Adams

Graduate Theses and Dissertations

Concerns about groundwater depletion from conventional irrigation agriculture in the Arkansas Delta region have led to the promotion of more efficient irrigation practices. With Arkansas being the largest producer of rice, the 10th largest producer of soybeans and the 16th largest producer of corn in the United States, the irrigation demand of these crops has put pressure on producers to find ways to irrigate more efficiently. Not only are the alternative technologies supposed to reduce water use, it is also believed that their adoption can also yield economic benefits for the producer. Despite these assumed benefits, adoption of alternative technologies …

Determining The Light Requirements Of Various Turfgrass Systems And Investigating Techniques To Quantify Photosynthetically Active Radiation, Travis Russell

Graduate Theses and Dissertations

Light is one of the primary growth-limiting factors of turfgrass. Without sufficient quantities of photosynthetically active radiation (PAR; 400-700 nm wavelength), turfgrass quality will decline and could ultimately result in plant death. PAR light can be expressed in a daily quantity known as the daily light integral (DLI) and has been utilized to determine minimum light requirements for turfgrass as well as other plants. With an estimated 25% of all turfgrass being maintained under some level of shaded conditions, it is imperative to define minimum DLI requirements of various turfgrass systems to ensure acceptable turf quality. In addition, it is …

Influence Of Multispecies Interference Of Common Ragweed (Ambrosia Artemisiifolia L.) And Common Waterhemp (Amaranthus Rudis Sauer) On Soybean [Glycine Max (L.) Merr.] Growth And Yield Under Variable Water Supply In Nebraska, Koffi Badou Jeremie Kouame

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Common ragweed (Ambrosia artemisiifolia L.) and common waterhemp (Amaranthus rudis Sauer) are two problematic weeds for soybean producers in the United States. Both weeds have evolved resistance to many herbicides, including glyphosate. It is therefore essential to understand how these weeds in mixture impact soybean growth and yield and also how they deplete soil moisture in rainfed and irrigated cropping systems. The objectives of this research were to: (i) understand the influence of variable water supply on soybean yield loss in mixture with ragweed and waterhemp, (ii) quantify the influence of variable water supply on soybean growth in …