Meat Science Commons^™

Impact Of Feeding Distillers Grains With Or Without Oil Removal As Well As Supplemental Corn Oil On Nutrient Digestibility By Finishing Cattle, Jordan E. Burhoop, Melissa L. Jolly-Breithaupt, Jana L. Gramkow Gramkow, Matthew K. Luebbe, Jim C. Macdonald, Galen E. Erickson

Nebraska Beef Cattle Reports

A digestion trial was conducted to determine the effects of the removal of corn oil from modified distillers grains plus solubles (MDGS) and the impact of supplemental corn oil on finishing cattle nutrient digestion. Four treatments were evaluated: a corn control diet (CON), 40% de-oiled MDGS (DO MDGS), or 38% de-oiled MDGS plus 2% corn oil (MDGS + Oil) formulated to equal the fat content of FF MDGS, or 40% full fat MDGS (FF MDGS). Treatment differences were observed for digestibility of dry matter, organic matter, and fiber, but not for fat. When oil was added to de-oiled MDGS, digestibility …

Effects Of Late Gestation Supplementation, Synchronization, And Creep Feeding In A Spring Calving Beef Herd In The Nebraska Sandhills, Devin Broadhead, L. A. Stalker, Jacki A. Musgrave Musgrave, Richard N. Funston

Nebraska Beef Cattle Reports

Supplementation during winter grazing increased cow BW and BCS but had no effect on reproduction or calf performance, thus increasing production costs without increasing returns. Using a CIDR for estrus synchronization in a herd with existing acceptable reproductive performance did not increase cow pregnancy rate or advance calving date. Feeding creep feed to calves is an effective means of increasing weaning BW which resulted in increased live and carcass weight. Under the conditions of this study, when additional feed and price slide for heavier calves was considered, feeding creep feed did not result in added profits.

Field Evaluations Of Insecticide Modes Of Action Classes For Control Of Horn Flies In Nebraska, David J. Boxler, Gary J. Brewer, Richard N. Funston Funston, Jacqueline A. Musgrave

Nebraska Beef Cattle Reports

Insecticides of different Mode of Action (MoA) classes were tested for their ability to reduce horn fly populations on cattle in Nebraska pastures between 2009 and 2016. Macrocyclic lactone products were the most efficacious, reducing horn fly numbers by an average of 93% over ten location years of testing. Organophosphate and pyrethroid MoA products, tested in 7 and 12 location years, reduced fly numbers by 75% and 73%. Classes tested only once were METI (88% reduction) and a combination of organophosphate + pyrethroid (64%).

Evaluation Of Revalor-Xh For Beef Heifers Fed Different Days On Feed, Robert G. Bondurant, Marshall N. Streeter, Galen E. Erickson Erickson, James C. Macdonald, Matt K. Luebbe

Nebraska Beef Cattle Reports

Heifers were treated with either no implant, an initial implant of Revalor-200 and re-implanted with Revalor-200, or Revalor-XH and assigned to one of four serial slaughter harvests at 151, 165, 179, and 193 days on feed to determine the effects on feedlot performance and carcass characteristics. Implanting heifers increased final BW, ADG and HCW while decreasing marbling score and improving feed efficiency compared to non-implanted heifers. Increasing days on feed decreased ADG while increasing feed efficiency, HCW, fat thickness, marbling score, and calculated yield grade. By increasing HCW sold, implanting revenue can be maximized, assuming added risk for YG discounts.

Supplementing Rumen Undegradable Protein To Grazing Cattle, Braden C. Troyer, Bradley M. Boyd, Andrea K. Watson Watson, Terry J. Klopfenstein

Nebraska Beef Cattle Reports

A pooled-analysis of previous Nebraska Beef Report Articles examined the impact of rumen undegradable protein (RUP) supplementation for cattle grazing different types of forage. Each lb of RUP supplement increased ADG by 0.63 lb/d when cattle were grazing smooth brome and 0.43 lb/d when grazing warm season grasses. Cattle did not respond to RUP when grazing summer annuals which were high (18.2%) in CP.

Effect Of Supplementation During The Breeding Season On A May-Calving Herd In The Nebraska Sandhills, Alicia C. Lansford, Jacki A. Musgrave, Richard N. Funston Funston

Nebraska Beef Cattle Reports

Females in their first and second breeding season received either a 32% crude protein (DM) supplement or no supplement throughout the breeding season. Supplementation did not affect heifer BW, BCS, and pregnancy rate at pregnancy diagnosis. Supplementation impacted primiparous cow BW and BCS at pregnancy diagnosis, but did not affect pregnancy rates. Calf birth weight and dystocia rates were unaffected by supplementation for both heifers and primiparous cow. Calves nursing supplemented dams were heavier at weaning. Greater supplementation may be needed to affect pregnancy rate.

Impact Of Corn Oil Removal From Modified Distillers Grains Plus Solubles And Supplemental Corn Oil On Finishing Cattle Performance, Jordan E. Burhoop, Curtis J. Bittner, F. Henry Hilscher Hilscher, Matt K. Luebbe, Jim C. Macdonald, Galen E. Erickson

Nebraska Beef Cattle Reports

A finishing study was conducted to evaluate removal of corn oil from modified distillers grains plus solubles (MDGS) and replacement of supplemental corn oil on finishing cattle performance. Four treatments were evaluated: a corn control diet, 40% de-oiled MDGS, 38% de-oiled MDGS plus 2% corn oil to equal the fat content of full fat MDGS, or 40% full fat MDGS. There was a significant improvement in ADG and F:G for cattle fed de-oiled MDGS plus oil compared to other treatments. Cattle fed full fat MDGS had numerically lower ADG and numerically poorer F:G (3.7%) compared with cattle fed MDGS plus …

Including Phenotypic Causal Networks In Genome-Wide Association Studies Using Mixed Effects Structural Equation Models, Mehdi Momen, Ahmad Ayatollahi Mehrgardi, Mahmoud Amiri Roudbar, Andreas Kranis, Renan Mercuri Pinto, Bruno D. Valente, Gota Morota, Guilherme J.M. Rosa, Daniel Gianola

Department of Animal Science: Faculty Publications

Background: Phenotypic networks describing putative causal relationship among multiple phenotypes can be used to infer single-nucleotide polymorphism (SNP) effects in genome-wide association studies (GWAS). In GWAS with multiple phenotypes, reconstructing underlying causal structures among traits and SNPs using a single statistical framework is essential for understanding the entirety of genotype-phenotype maps. A structural equation model (SEM) can be used for such purpose.

Methods: We applied SEM to GWAS (SEM-GWAS) in chickens, taking into account putative causal relationships among body weight (BW), breast meat (BW), hen-house production (HHP), and SNPs. We assessed the performance of SEM-GWAS by comparing the model results …

Physiological And Behavioural Response Of Two Dairy Cows’ Genotypes During Summertime In The Central Region Of Chile, Rodrigo A. Arias, Camila Herrera, Rafael Larraín, Fernando González, Terry L. Mader, Alejandro Velásquez

Department of Animal Science: Faculty Publications

Heat stress has been recognized as a serious problem in dairy farms. The study goal was to assess the effects of climatic conditions on physiological and behavioral responses of dairy cows in Central Chile. Data of tympanic temperature (TT), panting score, respiration rate (RR), and shade utilization of cows from two genotypes, Holstein (H) and Holstein x Montbeliarde (HM), were collected twice per day (AM/PM) during three periods of the summer season in Central Chile. Moreover, three thermal comfort indices: Comprehensive climate index (CCI), temperature humidity-index (THI), and adjusted THI were estimated using meteorological data. The hour of each day …

Big Data Analytics And Precision Animal Agriculture Symposium: Machine Learning And Data Mining Advance Predictive Big Data Analysis In Precision Animal Agriculture, Gota Morota, Ricardo V. Ventura, Fabyano F. Silva, Masanori Koyama, Samodha C. Fernando

Department of Animal Science: Faculty Publications

Precision animal agriculture is poised to rise to prominence in the livestock enterprise in the domains of management, production, welfare, sustainability, health surveillance, and environmental footprint. Considerable progress has been made in the use of tools to routinely monitor and collect information from animals and farms in a less laborious manner than before. These efforts have enabled the animal sciences to embark on information technology-driven discoveries to improve animal agriculture. However, the growing amount and complexity of data generated by fully automated, high-throughput data recording or phenotyping platforms, including digital images, sensor and sound data, unmanned systems, and information obtained …

The Influence Of Fat And Hemicellulose On Methane Production And Energy Utilization In Lactating Jersey Cattle, O. R. Drehmel, T. M. Brown-Brandl, J. V. Judy, S. C. Fernando, P. S. Miller, K. E. Hales, Paul J. Kononoff

Department of Animal Science: Faculty Publications

Feeding fat to lactating dairy cows may reduce methane production. Relative to cellulose, fermentation of hemicellulose is believed to result in less methane; however, these factors have not been studied simultaneously. Eight multiparous, lactating Jersey cows averaging (±SD) 98 ± 30.8 d in milk and body weight of 439.3 ± 56.7 kg were used in a twice-replicated 4 × 4 Latin square to determine the effects of fat and hemicellulose on energy utilization and methane production using a headbox-type indirect calorimetry method. To manipulate the concentration of fat, porcine tallow was included at either 0 or 2% of the diet …

Predictive Ability Of Genome-Assisted Statistical Models Under Various Forms Of Gene Action, Mehdi Momen, Ahmad Ayatollahi Mehrgardi, Ayyub Sheikhi, Andreas Kranis, Llibertat Tussell, Gota Morota, Guilherme J. M. Rosa, Daniel Gianola

Department of Animal Science: Faculty Publications

Recent work has suggested that the performance of prediction models for complex traits may depend on the architecture of the target traits. Here we compared several prediction models with respect to their ability of predicting phenotypes under various statistical architectures of gene action: (1) purely additive, (2) additive and dominance, (3) additive, dominance, and two-locus epistasis, and (4) purely epistatic settings. Simulation and a real chicken dataset were used. Fourteen prediction models were compared: BayesA, BayesB, BayesC, Bayesian LASSO, Bayesian ridge regression, elastic net, genomic best linear unbiased prediction, a Gaussian process, LASSO, random forests, reproducing kernel Hilbert spaces regression, …

Linkage Disequilibrium In Brazilian Santa Inês Breed, Ovis Aries, Amanda Botelho Alvarenga, Gregori Alberto Rovadoscki, Juliana Petrini, Luiz Lehmann Coutinho, Gota Morota, Matthew L. Spangler, Luis Fernando Batista Pinto, Gleidson Giordano Pinto Carvalho, G. B. Mourao

Department of Animal Science: Faculty Publications

For genomic selection to be successful, there must be sufficient linkage disequilibrium between the markers and the causal mutations. The objectives of this study were to evaluate the extent of LD in ovine using the Santa Inês breed and to infer the minimum number of markers required to reach reasonable prediction accuracy. In total, 38,168 SNPs and 395 samples were used. The mean LD between adjacent marker pairs measured by r² and |D′| were 0.166 and 0.617, respectively. LD values between adjacent marker pairs ranged from 0.135 to 0.194 and from 0.568 to 0.650 for r² for |D′| …

Estimates Of Genomic Heritability And Genome-Wide Association Study For Fatty Acids Profile In Santa Inês Sheep, G. A. Rovadoscki, S. F. N. Pertile, A. B. Alvarenga, A. S. M. Cesar, F. Pertille, J. Petrini, V. Franzo, W. V. B. Soares, G. Morota, Matthew L. Spangler, L. F. B. Pinto, G. G. P. Carvalho, D. P. D. Lanna, L. L. Coutinho, G. B. Mourao

Department of Animal Science: Faculty Publications

Background: Despite the health concerns and nutritional importance of fatty acids, there is a relative paucity of studies in the literature that report genetic or genomic parameters, especially in the case of sheep populations. To investigate the genetic architecture of fatty acid composition of sheep, we conducted genome-wide association studies (GWAS) and estimated genomic heritabilities for fatty acid profile in Longissimus dorsi muscle of 216 male sheep.

Results: Genomic heritability estimates for fatty acid content ranged from 0.25 to 0.46, indicating that substantial genetic variation exists for the evaluated traits. Therefore, it is possible to alter fatty acid profiles through …

Effect Of Differing Ingredients And Packaging Technologies On The Color Of High-Pressure Processed Ground Beef, Jhinuk Gupta, Chad G. Bower, Gary Sullivan, George A. Cavender

Department of Animal Science: Faculty Publications

High-pressure processing (HPP) is a nonthermal pasteurization technique to control pathogens, like Escherichia coli. However, color changes in raw beef induced by HPP restrict its use within the beef industry. ­e objectives of this study were to investigate the effects of adding curing agents (nitrite) and packaging with or without reducing compounds (ascorbic acid/erythorbate) on color retention in high-pressure processed ground beef. Color was measured (CIE L*a*b*) before HPP and on days 3, 7, 12, 14, 19, and 21 after HPP. Statistical analysis (SAS GLIMMIX) was run to identify the main effects of adding curing agents, packaging, and …

The Impact Of Truncating Data On The Predictive Ability For Single-Step Genomic Best Linear Unbiased Prediction, Jeremy T. Howard, Thomas A. Rathje, Caitlyn E. Bruns, Danielle F. Wilson-Wells, Stephen D. Kachman, Matthew L. Spangler

Department of Animal Science: Faculty Publications

Simulated and swine industry data sets were utilized to assess the impact of removing older data on the predictive ability of selection candidate estimated breeding values (EBV) when using single-step genomic best linear unbiased prediction (ssGBLUP). Simulated data included thirty replicates designed to mimic the structure of swine data sets. For the simulated data, varying amounts of data were truncated based on the number of ancestral generations back from the selection candidates. The swine data sets consisted of phenotypic and genotypic records for three traits across two breeds on animals born from 2003 to 2017. Phenotypes and genotypes were iteratively …

Do Stronger Measures Of Genomic Connectedness Enhance Prediction Accuracies Across Management Units?, Haipeng Yu, Matthew L. Spangler, Ronald M. Lewis, Gota Morota

Department of Animal Science: Faculty Publications

Genetic connectedness assesses the extent to which estimated breeding values can be fairly compared across management units. Ranking of individuals across units based on best linear unbiased prediction (BLUP) is reliable when there is a sufficient level of connectedness due to a better disentangling of genetic signal from noise. Connectedness arises from genetic relationships among individuals. Although a recent study showed that genomic relatedness strengthens the estimates of connectedness across management units compared with that of pedigree, the relationship between connectedness measures and prediction accuracies only has been explored to a limited extent. In this study, we examined whether increased …

Fecal Microbiota Transplantation Is Associated With Reduced Morbidity And Mortality In Porcine Circovirus Associated Disease, Megan C. Niederwerder, Laura A. Constance, Raymond R. R. Rowland, Waseem Abbas, Samodha C. Fernando, Megan L. Potter, Maureen A. Sheahan, Thomas E. Burkey, Richard A. Hesse, Ada G. Cino-Ozuna

Department of Animal Science: Faculty Publications

Porcine circovirus associated disease (PCVAD) is a term used to describe the multifactorial disease syndromes caused by porcine circovirus type 2 (PCV-2), which can be reproduced in an experimental setting through the co-infection of pigs with PCV-2 and porcine reproductive and respiratory syndrome virus (PRRSV). The resulting PCVAD-affected pigs represent a subpopulation within the co-infected group. In co-infection studies, the presence of increased microbiome diversity is linked to a reduction in clinical signs. In this study, fecal microbiota transplantation (FMT) was investigated as a means to prevent PCVAD in pigs co-infected with PRRSV and PCV-2d. The sources of the FMT …

Generation Of An Equine Biobank To Be Used For Functional Annotation Of Animal Genomes Project, E. N. Burns, M. H. Bordbari, M. J. Mienaltowski, V. K. Affolter, M. V. Barro, F. Gianino, G. Gianino, E. Giulotto, T. S. Kalbfleisch, S. A. Katzman, M. Lassaline, T. Leeb, M. Mack, E. J. Muller, J. N. Macleod, B. Ming-Whitfield, C. R. Alanis, T. Raudsepp, E. Scott, S. Vig, H. Zhou, J. L. Petersen, R. R. Bellone, C. J. Finno

Department of Animal Science: Faculty Publications

The Functional Annotation of Animal Genomes (FAANG) project aims to identify genomic regulatory elements in both sexes across multiple stages of development in domesticated animals. This study represents the first stage of the FAANG project for the horse, Equus caballus. A biobank of 80 tissue samples, two cell lines and six body fluids was created from two adult Thoroughbred mares. Ante-mortem assessments included full physical examinations, lameness, ophthalmologic and neurologic evaluations. Complete blood counts and serum biochemistries were also performed. At necropsy, in addition to tissue samples, aliquots of serum, ethylenediaminetetraacetic acid (EDTA) plasma, heparinized plasma, cerebrospinal fluid, synovial …

Energy Balance And Diurnal Variation In Methane Production As Affected By Feeding Frequency In Jersey Cows In Late Lactation, J. V. Judy, G. C. Bachman, T. M. Brown-Brandl, S. C. Fernando, K. E. Hales, P. S. Miller, R. R. Stowell, P. J. Kononoff

Department of Animal Science: Faculty Publications

Methane (CH₄) production of ruminants typically increases with increased dry matter intake (DMI). However, few studies have observed the effects of feeding multiple times a day and its effects on diurnal variation in CH₄ production and energy balance in late-lactation dairy cattle. A study using headbox-style indirect calorimetry and 12 multiparous (225 ± 16.2 d in milk; mean ± SD) lactating Jersey cows was conducted to determine the effects of feeding twice daily on diurnal variation in CH₄ production and total energy balance. A crossover design with 14-d periods (10 d of adaption and 4 d …