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Ecological Risk Assessment For The Western Australian Sea Cucumber Resource, Kimberley A. Smith, Cameron Desfosses, Dave Murphy, Amie Steele, Lachlan W. Strain 2024 Department of Primary Industries and Regional Development, Western Australia

Ecological Risk Assessment For The Western Australian Sea Cucumber Resource, Kimberley A. Smith, Cameron Desfosses, Dave Murphy, Amie Steele, Lachlan W. Strain

Fisheries Research Reports

In April 2024, the Department of Primary Industries and Regional Development (Department) convened an ecological risk assessment (ERA) of the fisheries that access the Western Australian Sea Cucumber Resource, which comprises a range of species from the class Holothuroidea. This document contains background information used to support the ERA risk scoring process, along with the scores from the workshop and a summary of the workshop discussions that were relevant to the scoring. This includes an overview of commercial fisheries that access the Resource, focusing primarily on the WA Sea Cucumber Fishery, and one fishing authorisation issued under the Aboriginal Community …


Seal Counting On Our Plages (S.C.O.O.P.), Kaanan Kharwa 2024 California Polytechnic State University, San Luis Obispo

Seal Counting On Our Plages (S.C.O.O.P.), Kaanan Kharwa

Master's Theses

The Vertebrate Integrative Physiology (VIP) lab monitors the population of northern elephant seals at the largest mainland breeding colony, located at Piedras Blancas (San Simeon, CA). As the population expands, more human-seal interactions and conflicts over land use occur. The VIP lab's work informs California State Parks and helps with the management of the rookery. Currently, members of the VIP lab fly a drone over the beaches, capture multiple images, and manually count the seals, which takes around 14 to 21 hours of analysis per survey. Machine learning methods such as Convolutional Neural Networks (CNN) and Region-based Convolutional Neural Networks …


Monitoring Marine Animal Interactions With Open Ocean Aquaculture And The Potential For Measuring Impacts, Ryan Richard Yont 2024 University of San Diego

Monitoring Marine Animal Interactions With Open Ocean Aquaculture And The Potential For Measuring Impacts, Ryan Richard Yont

Theses

Aquaculture, the farming of water-based organisms, is one of the fastest growing industries in the food production sector globally. Aquaculture farms, regardless of type, are categorized as either coastal or offshore marine aquaculture and are generalized into three categories: fed (e.g., finfish), unfed (e.g., filter-feeding bivalves), and autotrophic (e.g. kelp). Viewed as an agricultural industry, marine aquaculture is tightly regulated, particularly in the U.S. Despite this, an area of concern for the public and management alike is the potential for marine life interactions with aquaculture gear. Even the best-run farms represent a change in the physical and biological characteristics of …


Single-Tank Sequencing Batch Bioreactor With A Cellulose Substrate For Simultaneous Nitrification And Denitrification Of An Aquarium, Aranya Ponpornpisit, Malinee Jongjaroenjai, Naowarat Suthamnatpong, Sanit Piyapattanakorn, Surachet Burut-Archanai 2024 Chulalongkorn University

Single-Tank Sequencing Batch Bioreactor With A Cellulose Substrate For Simultaneous Nitrification And Denitrification Of An Aquarium, Aranya Ponpornpisit, Malinee Jongjaroenjai, Naowarat Suthamnatpong, Sanit Piyapattanakorn, Surachet Burut-Archanai

The Thai Journal of Veterinary Medicine

Processing and detoxifying nitrogenous waste in an aquarium is difficult with one tank because nitrifying and denitrifying bacteria need contradictory conditions to grow and survive. Herein, a single-tank sequencing batch bioreactor was used to simultaneously perform aerobic nitrification and denitrification for aquarium filtration. To evaluate its performance at the laboratory-scale, the 8 L bioreactor was connected to a 20 L aquarium with a carbon water filter and containing Oranda goldfish. The bioreactor comprised a bottom layer filled with 2.5 L of polyester sponge, covered with 1 L of carbon pellets and then 2.5 L of cellulose beads or polyester sponge. …


A Comparison Of Diploid And Triploid Eastern Oysters For Aquaculture Production Under Extreme Temperatures And Salinities, Joshua H. Kim 2024 Louisiana State University and Agricultural and Mechanical College

A Comparison Of Diploid And Triploid Eastern Oysters For Aquaculture Production Under Extreme Temperatures And Salinities, Joshua H. Kim

LSU Master's Theses

Off-bottom aquaculture of Eastern oysters (Crassostrea virginica) is a nascent industry that is increasingly supported by the use of triploid oysters, which grow faster than diploids. Despite their growth advantage, elevated triploid mortality compared to diploids under high temperature, low salinity, or a combination of these conditions challenge consistent triploid production. Identifying the environmental thresholds at which differential triploid mortality occurs and predicting its economic impact are important to informing decision-making in oyster aquaculture. The goal of this thesis was to compare the biological and economic performance of diploid and triploid oysters under high temperature and low salinity conditions. …


Impacts Of Invasive Carp And Their Population Dynamics On Fish Communities In The Missouri River, Joshua F. Kocik 2024 University of Nebraska-Lincoln

Impacts Of Invasive Carp And Their Population Dynamics On Fish Communities In The Missouri River, Joshua F. Kocik

School of Natural Resources: Dissertations, Theses, and Student Research

Invasive Carp species: Silver Carp Hypophthalmichthys molitrix, Bighead Carp Hypophthalmichthys nobilis, Grass Carp Ctenopharyngodon idella, and Black Carp Mylopharyngodon piceus have both potential and realized abilities to negatively impact native species. Specifically, Bighead Carp and Silver Carp as filter feeders have been theorized to be detrimental not only to adult filter-feeding species, but to many fish which rely on plankton and algae in their early-life stages. The impact of Invasive Carp on the overall fish community remains underexplored. The fish communities below Gavins Point Dam (Invasive Carp present) and Fort Randall Dam (Invasive Carp absent) afford the …


Spatiotemporal Plasticity In Reproductive Readiness And Recruitment Of Ichthyoplankton Of Invasive Silver Carp Along A Western Invasion Front, Jessi L. Urichich 2024 University of Nebraska-Lincoln

Spatiotemporal Plasticity In Reproductive Readiness And Recruitment Of Ichthyoplankton Of Invasive Silver Carp Along A Western Invasion Front, Jessi L. Urichich

School of Natural Resources: Dissertations, Theses, and Student Research

Individuals of invasive species at the edge of their invasion distribution may exhibit enhanced reproductive capacity and phenotypic plasticity leading to accelerated range expansion. Environmental conditions in highly fluctuating environments at distribution edges may either promote or hinder such reproductive readiness and phenotypic plasticity. Dynamic habitat conditions and periodic disturbances experienced in prairie streams, such as drought (e.g., low-flow, high water temperatures), may potentially reduce suitable spawning environments and ichthyoplankton recruitment of invasive Silver Carp, potentially slowing range expansion or enabling management strategies that reduce abundance in the absence of a reproducing population. Female Silver Carp batch fecundity, Gonadosomatic Index …


An Analysis Of Fish Assemblages And Flow Regimes Upstream And Downstream Of Falcon Reservoir, Christopher J. Austin 2024 The University of Texas Rio Grande Valley

An Analysis Of Fish Assemblages And Flow Regimes Upstream And Downstream Of Falcon Reservoir, Christopher J. Austin

Theses and Dissertations

The lower Rio Grande is regulated by Falcon and Amistad dams. Native fish species rely on the natural flow regime for habitat and spawning. I analyzed streamflow discharge and fish assemblages above and below Falcon Reservoir to assess potential impacts of dam impoundment. Fish collections were conducted by seine, and river discharge data was provided by the International Boundaries and Water Commission. I found significant differences in fish assemblages above vs below Falcon Reservoir, and the flow regime was significantly more altered downstream of Falcon Reservoir. I also identified two Species of Greatest Concern for Texas above Falcon Reservoir (Notropis …


Consumer Perceptions Of Hemp-Fed Aquaculture, Jillian Hyink 2024 University of Arkansas, Fayetteville

Consumer Perceptions Of Hemp-Fed Aquaculture, Jillian Hyink

Graduate Theses and Dissertations

Global demand for seafood has increased significantly over the past several decades and is projected to continue rising in the future. The volume of aquaculture production has also particularly increased to meet this demand in the United States and globally, offering a relatively sustainable supplement to wild fish supplies. However, conventional fish farming uses unsustainable quantities of fishmeal and fish oil as feed inputs, which raises the cost of production and introduces safety concerns associated with fish consumption. One currently underexplored potential alternative to fishmeal is hemp grain, which can provide an affordable and nutritious feed for carnivorous fish and …


Investigation Of The Pangas (Pangasianodon Hypophthalmus) Cultivation Sustainability In Cages At The Ratargul Freshwater Swamp Forest Of Bangladesh, Mrityunjoy Kunda, Md. Abu Kawsar, Diponkor Adikari, Sakib Tahmid Rishan, Ahmed Harun-Al-Rashid, Debasish Pandit 2024 The University of Texas Rio Grande Valley

Investigation Of The Pangas (Pangasianodon Hypophthalmus) Cultivation Sustainability In Cages At The Ratargul Freshwater Swamp Forest Of Bangladesh, Mrityunjoy Kunda, Md. Abu Kawsar, Diponkor Adikari, Sakib Tahmid Rishan, Ahmed Harun-Al-Rashid, Debasish Pandit

School of Integrative Biological & Chemical Sciences Faculty Publications

Determining the most appropriate stocking density for a specific fish species in an ambient condition is essential for successful cage aquaculture in terms of profitability which is mainly governed by growth. The current study was conducted to ascertain which stocking density gives the best result of widely cultured species in cage aquaculture, pangas (Pangasianodon hypophthalmus), at swamp forest environment of Ratargul Freshwater Swamp Forest, Bangladesh in terms of growth, production and economic return. Fish were reared for 93 days at three stocking densities, namely 30, 40 and 50 fish/m3 which were denoted as FSD30, FSD40 and FSD50, respectively, …


Twenty-Three Years Of Pcr-Based Seafood Authentication Assay Development: What Have We Learned?, Maleeka Singh, Robert G. Young, Rosalee S. Hellberg, Robert H. Hanner, Maria G. Corradini, Jeffrey M. Garber 2024 University of Guelph

Twenty-Three Years Of Pcr-Based Seafood Authentication Assay Development: What Have We Learned?, Maleeka Singh, Robert G. Young, Rosalee S. Hellberg, Robert H. Hanner, Maria G. Corradini, Jeffrey M. Garber

Food Science Faculty Articles and Research

Seafood is a prime target for fraudulent activities due to the complexity of its supply chain, high demand, and difficult discrimination among species once morphological characteristics are removed. Instances of seafood fraud are expected to increase due to growing demand. This manuscript reviews the application of DNA-based methods for commercial fish authentication and identification from 2000 to 2023. It explores (1) the most common types of commercial fish used in assay development, (2) the type of method used, (3) the gene region most often targeted, (4) provides a case study of currently published assays or primer-probe pairs used for DNA …


Estimation Of Effective Number Of Breeders And Effective Population Size In An Abundant And Heavily Exploited Marine Teleost, Andrea Bertram, Justin Bell, Chris Brauer, David Fairclough, Paul Hamer, Jonathan Sandoval-Castillo, Maren Wellenreuther, Luciano B. Beheregaray 2024 Flinders University

Estimation Of Effective Number Of Breeders And Effective Population Size In An Abundant And Heavily Exploited Marine Teleost, Andrea Bertram, Justin Bell, Chris Brauer, David Fairclough, Paul Hamer, Jonathan Sandoval-Castillo, Maren Wellenreuther, Luciano B. Beheregaray

Fisheries Research Articles

Obtaining reliable estimates of the effective number of breeders (Nb) and generational effective population size (Ne) for fishery-important species is challenging because they are often iteroparous and highly abundant, which can lead to bias and imprecision. However, recent advances in understanding of these parameters, as well as the development of bias correction methods, have improved the capacity to generate reliable estimates. We utilized samples of both single-cohort young of the year and mixed-age adults from two geographically and genetically isolated stocks of the Australasian snapper (Chrysophrys auratus) to investigate the feasibility of generating reliable Nb and Ne estimates for a …


Conservation Genomic Investigation Of A Threatened Trout Species Endemic To The Gila River, David Thomas Camak 2024 Department of Biology and Museum of Southwestern Biology, University of New Mexico, Albuquerque, NM 87131

Conservation Genomic Investigation Of A Threatened Trout Species Endemic To The Gila River, David Thomas Camak

Biology ETDs

Climate change is a looming threat to the persistence of species, especially aquatic, imperiled species. Species native to desert streams are at a particular disadvantage, as many species already face drought, floods, wildfires, and threats from nonnative species, all of which are thought to be exacerbated by climate change. Species such as the threatened Gila Trout (Oncorhynchus gilae) already have small ranges and persist in fragmented and isolated habitats that limits gene flow between populations. Therefore, it is important to understand the current genomic status of such populations to be able to predict the future effects of climate …


Population Demography, Occupancy, And Connectivity Of Invasive Bigheaded Carp In The Platte River, Nebraska And Its Tributaries, Blake W. Logan 2024 University of Nebraska-Lincoln

Population Demography, Occupancy, And Connectivity Of Invasive Bigheaded Carp In The Platte River, Nebraska And Its Tributaries, Blake W. Logan

School of Natural Resources: Dissertations, Theses, and Student Research

Silver Carp Hypophthalmichthys molitrix and Bighead Carp H. nobilis, collectively referred to as bigheaded carp, are invasive species in the United States of America that have expanded their range throughout the Missouri River basin in the last three decades. It may be desirable to develop management plans directed at the monitoring, control, or removal of bigheaded carp within the Missouri River basin. However, a knowledge gap exists regarding bigheaded carp ecology in Missouri River tributaries, which may be important for the development of management plans. As such, this study characterized bigheaded carp population demographics, occupancy, and connectivity in …


Modeling Pelagic Feeding In The Gulf Of Mexico With Implications For Ecosystem-Based Fisheries Management, Rebecca L. Scott 2024 University of South Florida

Modeling Pelagic Feeding In The Gulf Of Mexico With Implications For Ecosystem-Based Fisheries Management, Rebecca L. Scott

USF Tampa Graduate Theses and Dissertations

The focus of this dissertation was simulating trophic dynamics in the pelagic Gulf of Mexico (GOM) with an emphasis on ecosystem-based fishery management (EBFM) strategies for large pelagic species. Fisheries management in the United States largely utilizes single-species assessments, although managers are increasingly interested in EBFM approaches to better account for ecosystem effects on stocks such as predator/prey dynamics. Production in the surface layer of the pelagic zone is variable with environmental conditions and prey is often concentrated in patches by hydrodynamic features. Production is also transported vertically via diel vertical migration, during which deep-sea species provide potentially key forage …


Fisheries Occasional Publication No.147 - Aquaculture Development Zones – Policy Position Relating To Permitted Alternative Species, Department of Primary Industries and Regional Development, Western Australia 2024 Department of Primary Industries and Regional Development, Western Australia

Fisheries Occasional Publication No.147 - Aquaculture Development Zones – Policy Position Relating To Permitted Alternative Species, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

The purpose of this policy is to set out considerations relevant to the assessment of aquaculture proposals within Aquaculture Development Zones (ADZ) for species distinct from the group of species for which the ADZ was initially established (Alternative Species).


Simulated Transport Of Silver Therapon (Leiopotherapon Plumbeus) Fingerlings At Different Durations And Loading Densities: Effects On Survival And Water Quality, Frolan A. Aya, Reylan C. Gutierrez, Luis Maria Garcia 2024 Aquaculture Department, Southeast Asian Fisheries Development Center, Binangonan Freshwater Station, Binangonan, Rizal 1940, Philippines

Simulated Transport Of Silver Therapon (Leiopotherapon Plumbeus) Fingerlings At Different Durations And Loading Densities: Effects On Survival And Water Quality, Frolan A. Aya, Reylan C. Gutierrez, Luis Maria Garcia

The Philippine Agricultural Scientist

The silver therapon, Leiopotherapon plumbeus, is a new species for aquaculture. However, information on the optimal conditions for the transport of this species for grow-out culture needs to be established to avoid stress and unnecessary mortalities. This study examined the effects of duration of transport and loading density on survival and water quality during simulated transport of silver therapon. Hatchery-produced fingerlings [1.30 ± 0.34 g body weight (BW); 44.30 ± 3.77 mm total length (TL)] were held in double-layered oxygenated plastic bags at three transport durations (6 h, 9 h, and 12 h) and densities (40, 80, and 120 …


A Potential Of Watercress Nasturtium Officinale Bioactive Compounds In Inhibiting Infectious Myonecrosis Virus (Imnv) By Targeting Rna-Dependent Rna Polymerase (Rdrp) Virus From Several Countries: In Silico Approach, Qurrota A’yunin, Fatchiyah Fatchiyah, Maftuch Maftuch, Feri Eko Hermanto, Muhammad Hermawan Widyananda, Narendra Santika Hartana, Muhaimin Rifa’i, Yoga Dwi Jatmiko 2024 Biology Department, Faculty of Mathematics and Natural Sciences, Brawijaya University, Malang, Indonesia

A Potential Of Watercress Nasturtium Officinale Bioactive Compounds In Inhibiting Infectious Myonecrosis Virus (Imnv) By Targeting Rna-Dependent Rna Polymerase (Rdrp) Virus From Several Countries: In Silico Approach, Qurrota A’Yunin, Fatchiyah Fatchiyah, Maftuch Maftuch, Feri Eko Hermanto, Muhammad Hermawan Widyananda, Narendra Santika Hartana, Muhaimin Rifa’I, Yoga Dwi Jatmiko

Karbala International Journal of Modern Science

Infectious myonecrosis virus (IMNV) disease causes mass mortality and decreased shrimp production. The RdRp region projects to the interior, where it may function in transcription. The focus of this study was to determine the effect of amino acid polymorphisms from several countries on the structure of RdRp and identify the potential of watercress in inhibiting IMNV by targeting the RdRp protein of IMNV through an in silico approach. The results showed that the structure of the IMNV RdRp protein from Indonesia was similar to Mexico, and the protein structure from India_QDN was identical to India_QIL. Ligand binding affinity values showed …


A Model Of Oocyte Population Dynamics For Fish Oogenesis, Louis Fostier, Frédérique Clément, Romain Yvinec, Violette Thermes 2024 INRAE (Institut national de recherche pour l’agriculture, l’alimentation et l’environnement)

A Model Of Oocyte Population Dynamics For Fish Oogenesis, Louis Fostier, Frédérique Clément, Romain Yvinec, Violette Thermes

Biology and Medicine Through Mathematics Conference

No abstract provided.


Impacts Of Hematodinium Infection In A Seasonal Population Model Of The Chesapeake Bay Blue Crab, Gwendolyn R. Sargent, Romuald Lipcius, Leah Shaw, Junping Shi, Jeffrey D. Shields 2024 William & Mary

Impacts Of Hematodinium Infection In A Seasonal Population Model Of The Chesapeake Bay Blue Crab, Gwendolyn R. Sargent, Romuald Lipcius, Leah Shaw, Junping Shi, Jeffrey D. Shields

Biology and Medicine Through Mathematics Conference

No abstract provided.


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