Aquaculture and Fisheries Commons^™

From Sequencing To Conservation: Genomic Analysis Of Three Sportfish Species In West Virginia, Andrew Johnson

Graduate Theses, Dissertations, and Problem Reports (ETD)

Situated in the Appalachian Mountains, one of the oldest mountain ranges on Earth, West Virginia waters boast rich ichthyofauna including native sportfish species walleye (Sander vitreus), largemouth bass (Micropterus nigricans), and muskellunge (Esox masquinongy). These three species are all native to the contemporary Ohio River watershed and play a major recreational and ecological role in local fisheries. Ecologically, all three species are apex predators and play a key role in ecosystems by directly influencing local fish assemblages. As dominant apex predators all three species are highly sought after in recreational fisheries with largemouth bass …

Effects Of Environmental And Anthropogenic Gradients On Fish Beta Diversity In Central Appalachian Streams, Alanna Kaylee Lowther Smith

Graduate Theses, Dissertations, and Problem Reports (ETD)

Understanding the environmental and spatial drivers of community composition is essential for conserving freshwater biodiversity. We examined how environmental gradients, land cover, and spatial structure influence fish beta diversity in wadeable streams across West Virginia, USA. We quantified total beta diversity and partitioned it into species replacement and richness difference components and used local contributions to beta diversity (LCBD) to identify compositionally unique sites. Community–environment relationships were evaluated with distance-based redundancy analysis (dbRDA), and a beta regression GLMM was used to test how elevation, slope, land cover, and stream order (factor) predicted LCBD while accounting for spatial structure (dbMEMs) and …

Bioresource Management Via Least Cost Feed Formulation For Red Tilapia (Oreochromis Sp.): Application Of Linear Programming Technique, Boudjema Kamel, Redhouane Benfares, Affaf Kord, Toufik Milla, Belkacem Guenachi, Lynda Frai, Rachida Itcher, Hocine Kherzane

Journal of Bioresource Management

The method of linear programming (LP) was utilized to determine the relationship between the composition of nutrients of each ingredients, specifications for raw materials, cost and requirements for nutrients of the red tilapia (Oreochromis sp.), in order to define: (1) least cost ration formulation, (2) least cost diet, (3) minimum price of producing a particular diet after meeting a number of requirements. The resulting LP models were solved using the simplex algorithm. Therefore, our results show that, formulated feed had high protein content (31.92 %), Lipid (2.53), Moisture (9.10 %) and Ash (9.00 %). The utilization of diet …

A Meta-Analysis Of Seafood Species Mislabeling In The United States, Sarah Ahles, Christina A. Mireles Dewitt, Rosalee S. Hellberg

Food Science Faculty Articles and Research

Seafood is vulnerable to mislabeling due to complex global supply chains, varying prices, and the similar appearance of species. While numerous studies have been published on seafood mislabeling, the focus is often on species known to be commonly substituted. Therefore, the overall mislabeling rates of seafood sold in the U.S. remain unknown, especially for the most consumed species. The objective of the current study was to compile the results of seafood mislabeling studies into a single resource to provide informative statistics on U.S. seafood mislabeling. A meta-analysis was conducted on U.S. seafood mislabeling studies that tested commercial samples of bony …

Using Bivalves As An Indicator For Fecal Bacteria, Kamala Chuss

Honors Scholar Theses

This project focuses on the integration of fecal bacteria from warm-blooded animals into bivalve tissue, and the utilization of bivalves as an indicator for fecal bacteria in waterways. Bivalves may give a more representative long-term average of fecal bacteria in water as compared to direct water testing. The primary objective is to create a standard operating procedure to use bacterial testing of bivalves as a proxy for bacteria concentration in the water. This method can be used in places where bivalves do not already exist by adding them to a body of water, or by collecting bivalves that already exist …

Social Learning And Cultural Enrichment For Fish Welfare, Chiawen Chiang, Becca Franks

Animal Sentience

This commentary examines how understanding animal culture—shared behaviors and knowledge transmitted through social learning—plays a role in advancing welfare practices for captive fishes. Despite extensive evidence of fishes' complex sociocultural capacities, their psycho-social needs remain underestimated and unmet in zoos and aquaria. We explore what considering fish culture might mean for welfare practices: diverse social learning opportunities, cultural development, and thoughtful group management. More knowledge about wild fishes' lives will help bridge the gap between their full, complex lives and current captive welfare practices.

Climate Change Affecting Waterfowl Migration, Destiny Fox

D.U.Quark

Climate Change is a major environmental factor in waterfowl migration patterns. Migratory waterfowl are species of birds that live in or around wetlands, mainly including lakes, streams, and marshes. Contaminated bodies of water at stopover sites during migratory seasons can lead to death among many species of waterfowl, as well as water borne diseases from snail eggs. Changing environmental factors can also lead to negative effects on the bird’s ability to forage properly. These environmental factors include the evaporation of several wetlands that have led to waterfowl foraging in local farmers’ land. Focusing more heavily on improving satellite tracking could …

Spatial Ecology Of Large Bodied Ichthyofauna In The Red River Of The North Basin, William Marshall Stuart

School of Natural Resources: Dissertations, Theses, and Student Research

Understanding spatial patterns and processes is essential for designing research studies, implementing management actions, and planning restoration efforts. The Red River of the North basin spans a broad geographic area where jurisdictional oversight is divided among several entities (Manitoba, CAN; North Dakota, USA; Minnesota, USA; South Dakota, USA), creating a mosaic of regulatory and functional process zones. Understanding the spatial ecology of freshwater fishes in this disjointed landscape is essential to address diverse life history requirements and the movement constraints imposed by anthropogenic structures. Long-term acoustic telemetry revealed that large bodied ichthyofauna employ a diverse range of movement strategies (i.e., …

Comparing Metabolism And Hypoxia Tolerance Of Native And Non-Native Florida Freshwater Fishes In Climate Change Scenarios, Benjamin A. Share

All HCAS Student Capstones, Theses, and Dissertations

As climate change brings rising water temperatures and lower dissolved oxygen (DO) concentrations to freshwater bodies, it has become increasingly important to understand how this will affect ecosystems with established non-native or invasive species. Fishes of the family Cichlidae are the most pervasive non-native fishes in the Everglades and may increase their range further north under a changing climate. To better understand potential invasibility and competition with native fishes, the metabolism and hypoxia tolerance of non-native Blue Tilapia Oreochromis aureus was compared to native Bluegill Lepomis macrochirus when acclimated across a range of seasonal and projected temperatures. Intermittent-flow respirometry was …

Understanding Bigeye Scad (Selar Crumenophthalmus) In Southeast Florida: Age-Growth, Reproduction, And Diet, Mariah France

All HCAS Student Capstones, Theses, and Dissertations

In southeastern Florida, the bigeye scad (Selar crumenophthalmus) is highly regarded as a baitfish for targeting billfish and other large sportfishes, often commanding market prices as live bait exceeding $180 per dozen. Despite its economic significance, there is limited knowledge regarding the species within the Atlantic Ocean, especially the population that occurs in Florida. Bigeye scad were collected monthly from local bait shops in Pompano Beach, Miami, and Islamorada to assess age-growth, reproductive behaviors, and dietary habits. Specimens from May to August had the highest values for length-weight relationships and gonadsomatic index, indicative of a spawning season during …

Fisheries Research Report No. 347: Recreational Fishing For Marron In South-West Western Australia From 2000 – 2024: Estimates Of Participation, Effort And Catch, Claire B. Smallwood, Karina L. Ryan, Eva Lai, Fabian I. Trinnie, Aidan Long

Fisheries Research Reports

The Smooth Marron (Cherax cainii) (‘Marron’) is endemic to freshwater dams and rivers of south-west Western Australia. The Recreational Marron Fishery is managed as a single stock within the South-West Recreational Freshwater Resource and is highly vulnerable to over-exploitation due to the biological characteristics of the species (e.g., low fecundity, localised populations) as well as external environmental (e.g., habitat loss, reduction in rainfall) and human factors (e.g., fishing, land clearing).

Due to this vulnerability, this species has been the focus of research, monitoring and management since the 1970’s. Recreational fishing for Marron was first licensed under the Amateur Fisherman’s licence …

Fisheries Research Report No. 349: South-West Freshwater Angling In Western Australia From 2000/01 – 2023/24: Estimates Of Participation, Effort And Catch, Aidan Long, Claire B. Smallwood, Karina L. Ryan, Eva Lai, Fabian I. Trinnie

Fisheries Research Reports

The South-west Freshwater Angling fishery (SWFA) in Western Australia is a licensed, low participation fishery primarily targeting the introduced Brown Trout (Salmo trutta) and Rainbow Trout (Oncorhynchus mykiss), which are stocked in popular dams and rivers across the region. Other licensed species include the introduced Redfin Perch (Perca fluviatilis) and the native Freshwater Cobbler (Tandanus bostocki). Freshwater angling is also managed by input and output control rules including gear regulations (one rod and line or handline with a small landing net), minimum size limits and a daily mixed freshwater species bag limit of 4 individuals (excluding Redfin Perch which has …

Draft Management Plan For The South Coast Scallop Managed Fishery, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Management Papers

The Minister for Fisheries (Minister) intends to transition the South Coast Trawl Fishery (SCTF) to formal management by determining a management plan for the fishery in accordance with section 54(1) of the Fish Resources Management Act 1994 (FRMA).

Section 54(1) of FRMA provides for the Minister to determine by instrument in writing published in the Government Gazette, a management plan for a fishery. Not less than two months prior to determining a management plan, the Minister must, in accordance with section 64(2) of FRMA, prepare a draft of the plan and by notice in the Gazette, state their intent to …

Research Angler Program Newsletter: Recognition Of Two Decades Of The Research Angler Program, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Research Reports

For over two-decades, volunteer recreational fishers have been diligently filling in angler logbooks as part of the Department of Primary Industries and Regional Development (DPIRD) Research Angler Program (RAP). The program, which began in 2004, was initially designed as a tool to enhance data collection for estuarine finfish in the West Coast Bioregion.

Throughout time, the program expanded to collect data on all species, habitat types and bioregions, generating community involvement all over the state. To date, fishers have reported data on over 19,000 fishing trips and more than 450 different fish and invertebrate (crustaceans and molluscs) species.

Fishers participating …

Supplementation Of Commercial Probiotic Lactobacillus Casei In Rearing Early-Stage Silver Therapon (Leiopotherapon Plumbeus) Larvae: Effects On Growth, Body Composition, And Stress Tolerance, Frolan A. Aya, Reylan C. Gutierrez, Mark Joseph Reyes, Luis Maria B. Garcia

The Philippine Agricultural Scientist

Supplementation of probiotics in live feeds and rearing water may improve the growth, survival, and resistance of fish larvae. This study examined the beneficial effect of a commercial probiotic bacteria Lactobacillus casei on the growth, body composition, and stress resistance in early-stage silver therapon (Leiopotherapon plumbeus) larvae. Larvae at 12 d post-hatch (DPH) (9.76 ± 1.32 mm total length [TL] and 13.48 ± 4.80 mg body weight [BW]) were reared in triplicate groups of 15 larvae per tank from 12 – 40 DPH (Phase 1) and 41 – 96 DPH (Phase 2). From 12 – 40 DPH, larvae were fed …

Recreational Fishing For Western Rock Lobster: Estimates Of Participation, Effort And Catch In 2023/24, Claire B. Smallwood, Karina L. Ryan, Alissa C. Tate

Fisheries Research Reports

The Western Rock Lobster (WRL) (Panulirus cygnus) is the most commonly caught Rock Lobster (RL) species in Western Australia. Catches from the commercial and recreational sectors are required to determine and monitor Total Allowable Commercial Catch (TACC), Total Allowable Recreational Catch (TARC) and the proportion of Allowable Harvest Level (AHL) achieved. The TARC is set at 5% of the AHL and evaluated in the harvest strategy based on a 5-year average.

Data for the recreational sector are obtained using phone-recall surveys to provide annual estimates of participation, fishing effort and retained catch (by numbers) from recreational fishers who hold a …

Informing Management Of American Shad (Alosa Sapidissima) In The Carolinas: Evaluating Novel Fish Passage Approaches And Acoustic Tracking Methods, Margaret Gaither

All Theses

Acoustic telemetry is a valuable tool for fisheries scientists to study the movements and migratory behaviors of aquatic organisms. A critical assumption of this method is that tagged fish exhibit similar behaviors and survival rates as their untagged counterparts. To investigate this, we conducted a 12-week laboratory study on adult American Shad (Alosa sapidissima) using gastroesophageal insertion of acoustic transmitters. We implanted 80 fish with dummy transmitters and monitored tag retention and survival. Our analysis, employing a mixed effects Cox’s proportional hazards model, revealed no significant differences in survival between tagged and control fish, regardless of sex. Additionally, …

Investigating Nekton Response To Changing Salinities In The Mississippi Sound: An Experimental And Statistical Approach, Adam Murray

Master's Theses

The Mississippi Sound provides nursery habitats for many coastal species and is recognized for its commercial fisheries. Previous freshening events linked to the Bonnet Carré Spillway, a Mississippi River flood diversion structure, proved catastrophic for oyster populations in the Mississippi Sound, but effects on mobile fish and shellfish species are not well-defined. The planned Mid-Breton Sediment Diversion (MBSD), an initiative to combat wetland loss, is also forecasted to lower salinities in the region, increasing the need to better understand responses of commercially and ecologically important species to freshening events. The objective of this study was to characterize effects of salinity …

Accounting For Post-Release Mortality In Data-Limited, Length-Based Assessments For Four Demersal Fish Species With Varying Life Histories, Brett Crisafulli, Sybrand A. Hesp, Ebenezer Afrifa-Yamoah, Ute A. Mueller, Karina L. Ryan, David V. Fairclough, Norman G. Hall, Johnny Lo

Fisheries Research Articles

Released (or discarded) fish from recreational and commercial line fisheries can experience significant levels of post-release mortality (PRM), affecting sustainability. Although PRM effects are often considered in data-rich (integrated model) assessments, this is uncommon in data-limited assessments. This study investigates impacts of PRM when applying data-limited, length-based assessment methods for four reef-dwelling demersal fish species in temperate Western Australia (Glaucosoma hebraicum, Chrysophrys auratus, Choerodon rubescens and Epinephelides armatus). These species differ considerably in their biology and susceptibility to PRM. For each species simulations were undertaken to (1) evaluate the reliability of a length-based catch curve (LBCC) …

Why Is Fish Welfare Still So Neglected?, Caroline M. Maia

Animal Sentience

Oldfield & Bonano (O&B) address an important problem in the field of fish welfare, one that calls for greater attention from scientists and practitioners. O&B show that fish welfare, particularly at the psychological level, is under-investigated. They focus mainly on zoos and aquaria, but their concerns extend also to other domains, including fish farming. Fish are sentient animals; priority should be given to their welfare in all environments where they are under human care.