Physical Chemistry Commons^™

Carbon Oxidation At The Atomic Level: A Computational Study On Oxidative Graphene Etching And Pitting Of Graphitic Carbon Surfaces, Simon Schmitt

Theses and Dissertations--Mechanical and Aerospace Engineering

In order to understand the oxidation of solid carbon materials by oxygen-containing gases, carbon oxidation has to be studied on the atomic level where the surface reactions occur. Graphene and graphite are etched by oxygen to form characteristic pits that are scattered across the material surface, and pitting in turn leads to microstructural changes that determine the macroscopic oxidation behavior. While this is a well-documented phenomenon, it is heretofore poorly understood due to the notorious difficulty of experiments and a lack of comprehensive computational studies. The main objective of the present work is the development of a computational framework from …

Open Ensemble Modeling Of Confined Electrolytes, Serban Zamfir

Theses and Dissertations

The main purpose of my study was to work towards better understanding the behavior of salt solutions in nanoconfinements and its causes. To this end I have developed an in-house C++ code that can perform notoriously challenging open ensemble Monte Carlo molecular simulations, calculate relevant thermodynamic and extract structural information about each system. I use this code in my first project which deals with the intrusion/extrusion of aqueous NaCl into a nanopore open to a pressurized bulk environment. For my second project, I study the effect of explicitly accounting for intramolecular polarization and accompanying multi-body interactions on the uptake, structure, …

Recent Developments In The Pyscf Program Package, Qiming Sun, Xing Zhang, Samragni Banerjee, Peng Bao, Marc Barbry, Nick S. Blunt, Nikolay A. Bogdanov, George H. Booth, Jia Chen, Zhi-Hao Cui, Janus J. Eriksen, Yang Gao, Sheng Gun, Jan Hermann, Matthew R. Hermes, Kevin Koh, Peter Koval, Susi Lehtola, Zhendong Li, Junzi Liu, Narbe Mardirossian, James D. Mcclain, Mario Motta, Bastien Mussard, Hung Q. Pham, Artem Pulkin, Wirawan Purwanto, Paul J. Robinson, Enrico Ronca, Elvira R. Sayfutyarova, Maximillian Scheurer, Henry F. Schurkus, James E.T. Smith, Chong Sun, Shi-Ning Sun, Shiv Upadhyay, Lucas K. Wagner, Xiao Wang, Alec White, James Daniel Whitfield, Mark J. Williamson, Sebastian Wouters, Jun Yang, Jason M. Yu, Tianyu Zhu, Timothy C. Berkelbach, Sandeep Sharma, Alexander Yu Sokolov, Garnet Kin-Lic Chan

University Administration Publications

PySCF is a Python-based general-purpose electronic structure platform that supports first-principles simulations of molecules and solids as well as accelerates the development of new methodology and complex computational workflows. This paper explains the design and philosophy behind PySCF that enables it to meet these twin objectives. With several case studies, we show how users can easily implement their own methods using PySCF as a development environment. We then summarize the capabilities of PySCF for molecular and solid-state simulations. Finally, we describe the growing ecosystem of projects that use PySCF across the domains of quantum chemistry, materials science, machine learning, and …

Reactions At The Critical Point Of Solution, Jason Mote

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.

Effect Of The Electrodeposition Potential Of Platinum On The Catalytic Activity Of A Pt/Gc Catalyst Toward Formic Acid Electro−Oxidation, Islam M. Al-Akraa, Bilquis A. Al-Qodami Ms., Ahmad M. Mohammad Prof

Chemical Engineering

The electrocatalytic activity of platinum (Pt)–modified glassy carbon (GC) (referred as Pt/GC) electrodes toward the formic acid electro−oxidation (FAO) was investigated. The Pt deposition on the GC substrate was carried out by a potentiostatic technique at different potentials (from 0.2 V to −0.2 V vs. Hg/Hg2Cl2/KCl (sat.) reference electrode) and the corresponding influence on the catalytic activity toward FAO was monitored. The electrocatalytic inspection revealed a potential role for the Pt deposition potential in boosting the catalytic efficiency of the catalyst toward FAO and further in mitigating the CO poisoning that eventually deactivate the catalyst. Interestingly, the highest activity toward …

A Spin-Coated Tiox/Pt Nanolayered Anodic Catalyst For The Direct Formic Acid Fuel Cells, Islam M. Al-Akraa, Ahmad M. Mohammad Prof

Chemical Engineering

The CO poisoning of the platinum anodic catalyst which typically functions the catalytic deterioration of the direct formic acid fuel cells could be minimized with a simple modification for Pt with titanium oxide. The fabrication scheme involved the spin-coating of a Ti precursor onto a Pt thin layer that was physically sputtered onto a Si substrate. The whole assembly was subjected to a post-annealing processing to produce the TiOx layer (60 nm) in a porous structure (mostly Anatase) atop of the Pt surface. The porous nature of the TiOx layer permitted the participation of Pt in the electrocatalysis of the …

Resolving The Puzzle Of Single-Atom Silver Dispersion On Nanosized Γ-Al2O3 Surface For High Catalytic Performance, Fei Wang, Jinzhu Ma, Shaohui Xin, Qiang Wang, Jun Xu, Changbin Zhang, Hong He, Xiao Cheng Zeng

Xiao Cheng Zeng Publications

Ag/γ-Al₂O₃ is widely used for catalyzing various reactions, and its performance depends on the valence state, morphology and dispersion of Ag species. However, detailed anchoring mechanism of Ag species on γ-Al₂O₃ remains largely unknown. Herein, we reveal that the terminal hydroxyls on γ-Al₂O₃ are responsible for anchoring Ag species. The abundant terminal hydroxyls existed on nanosized γ-Al₂O₃ can lead to single-atom silver dispersion, thereby resulting in markedly enhanced performance than the Ag cluster on microsized γ-Al₂O₃. Density-functional-theory calculations confirm that Ag atom is mainly …

Development Of A Novel Highly-Sensitive Brucellosis Sensor Based On Surface Plasmon Resonance Spectroscopy, Amal Kasry, Ihab Adly, Asharf Sayour, Hossam Sayour

Nanotechnology Research Centre

Brucellosis is considered a significant health threat, it is an infectious disease caused by the bacteria Brucella, which can spread from animals to humans causing severe diseases. Through this project, we aim to develop a very highly sensitive biosensor to detect Brucella early before spreading. This sensor is based on surface plasmon resonance (SPR) technique, which is used to analyze kinetics of interaction between biomolecules. It can detect down to picomolar concentrations of some proteins.

Synthesis, Magnetic And Adsorption Of Dye Onto The Surface Of Nio Nanoparticles, Islam Gomaa, Nasser M. Hosny

Nanotechnology Research Centre

NiO was synthesized simply via thermal decomposition of nickel ascorbate, which resulted from semi-solid reaction of nickel acetate and ascorbic acid. The prepared precursor was characterized by elemental, thermal and spectral analyses. The precursor was decomposed at 700 °C producing cubic NiO with average size 50 nm as indicated from XRD and TEM. FESEM indicated the formation of macroporous NiO. Magnetic parameters (saturation magnetization (Ms), remanence (Mr) and coercivity (Hc)) of NiO nanoparticles and its precursor were determined and compared with the bulk nickel. Zeta potential measurements at different pH values indicated that NiO is negatively charged. Adsorption of ponceau …

Ionic Liquid Functionalized Β-Cyclodextrin Modified Electrode As Electrochemical Sensor For 2,4-Dichlorophenol, Fairuz Liyana Mohd Rasdi

Student Works (2020-2029)

This thesis described the synthesis and characterization of ionic liquid monofunctionalized β-cyclodextrin (β-CD-1-BIMOTs) and ionic liquid difunctionalized β-cyclodextrin (β-CD-2-BIMOTs) for sensor applications. The physical characterizations of these compounds have been conducted using nuclear magnetic resonance (NMR), Fourier transform infra-red (FTIR), energy dispersive x-ray (EDX), x-ray diffraction (XRD) and Brunauer-Emmet-Teller (BET) analyses. These compounds were used as modifiers for carbon paste electrode (CPE). Cyclic voltammetry and chrono-amperometry methods were employed to examine the electrochemical responses of all prepared CPEs. All prepared electrodes show responses towards the target analyte of 2,4-dichlorophenol (2,4-DCP). Both β-CD-1-BIMOTs/CPE and β-CD-2-BIMOTs/CPE give higher current (i) responses compared …

Factors Influencing Huntingtin Aggregation At Surfaces: Implications For Huntington’S Disease, Sharon E. Groover

Graduate Theses, Dissertations, and Problem Reports (ETD)

Huntington’s Disease (HD) is a genetic, neurodegenerative disease characterized by an abnormal polyglutamine (polyQ) expansion in the first exon of the huntingtin protein (htt). The polyQ domain facilitates aggregation and initiates the formation of a diverse collection of aggregate species, including fibrils, oligomers and annular aggregates. The first 17 amino acids of htt (Nt17) directly flank the polyQ domain and is a key factor in htt’s association to membranous structures. In addition to Nt17 being an amphipathic αhelix, it also promotes aggregation through self-association and contains numerous posttranslational modifications (PTMs) that can modulate toxicity and subcellular localization. For in depth …

The Effects Of Membrane Physicochemical Properties On Huntingtin Membrane Association And Downstream Aggregation, Maryssa Beasley

Graduate Theses, Dissertations, and Problem Reports (ETD)

Huntington’s Disease (HD) is a fatal neurodegenerative disorder caused by an expanded glutamine repeat region (polyQ) within the huntingtin protein (htt). As a result of the expanded polyQ domain, htt associates into a variety of toxic aggregate species. The polyQ domain of htt is flanked at the N-terminal end by 17 amino acids (Nt17) that adopt an amphipathic α-helical structure in the presence of binding partners such as lipid membranes. In addition to comprising a lipid binding domain, the Nt17 amphipathic α -helix has been directly implicated in htt aggregation initiation via self-association with other Nt17 α -helices. Due to …

Chronic Chemogenetic Stimulation Of The Nucleus Accumbens Produces Lasting Reductions In Binge Drinking And Ameliorates Alcohol-Related Morphological And Transcriptional Changes, Dar'ya Y. Pozhidayeva, Sean Farris, Calla Goeke, Evan Firsick, Kayla G. Townsley, Marina Guizzetti, Angela Ozburn

Chemistry Faculty Publications and Presentations

Binge drinking is a dangerous pattern of behavior. We tested whether chronically manipulating nucleus accumbens (NAc) activity (via clozapine-N-oxide (CNO) and Designer Receptors Exclusively Activated by Designer Drugs (DREADD)) could produce lasting eects on ethanol binge-like drinking in mice selectively bred to drink to intoxication. We found chronically increasing NAc activity (4 weeks, via CNO and the excitatory DREADD, hM3Dq) decreased binge-like drinking, but did not observe CNO-induced changes in drinking with the inhibitory DREADD, hM4Di. The CNO/hM3Dq-induced reduction in ethanol drinking persisted for at least one week, suggesting adaptive neuroplasticity via transcriptional and epigenetic mechanisms. Therefore, we defined this …

Molecular Dynamics Simulations Of Phase Behaviour And Structural Studies Of Guanidinium Triflate Ionic Liquid And Its Mixture With Water And N-Methyldiethanolamine For Carbon Dioxide Removal, Naimah Haron

Student Works (2020-2029)

Molecular dynamics (MDs) simulations with an all-atom force field have been carried out to understand the phase equilibrium behaviour of aqueous guanidinium triflate [gua][OTf] ionic liquid (IL) (binary system) at 440.15 K, as well as the phase equilibrium behaviour of N-methyl diethanolamine (MDEA) with aqueous [gua][OTf] IL (ternary system) at 298.15 K. This work further elaborated the understanding of absorption mechanism of carbon dioxide (CO2) into ternary system at 298.15 K. For binary system, the simulations measured changes in different physical properties such as density, structural, bonding properties (radial distribution function (RDF)), water clustering and hydrogen bonding) and dynamic property …

Phytochemical Investigations Of Goniothalamus Tapis And G. Tapisoides, And Kinetic Mechanism Studies Of Goniothalamin, Pei Theng Rosalind Kim

Student Works (2020-2029)

Phytochemical studies on two species of Annonaceae; Goniothalamus tapis and Goniothalamus tapisoides have been carried out. Isolation and purification of the crude extract of stem bark of G. tapis and G. tapisoides yielded seventeen compounds. G. tapis gave nine compounds; goniothalamin 1, isoaltholactone 41, 3-acetylisoaltholactone 151, cheliensisin A 22, garvensintriol 4, goniopyyprone 26, 7-epi-goniofufurone 49, stigmasterol 133 and β-sitosterol 134. Out of nine compounds, 3-acetyl-isoaltholactone 151 was identified as a new styryl-lactone. The skeleton is similar as the major compound, isoaltholactone 41. But 3-acetylisoaltholactone 151 have different functional group compared to hydroxyl group in isoaltholactone 41, which is acetyl group. …

Laser Ablation In Liquid For The Controlled Production Of Photoluminescent Graphene Quantum Dots And Upconverting Nanoparticles, Rosemary Lynn Calabro

Theses and Dissertations--Chemistry

Photoluminescent­ (PL) nanomaterials play an important role in areas including displays, sensing, solar, photocatalysis, and bio applications. Traditional methods to prepare PL materials suffer many drawbacks such as harsh chemical precursors, complicated synthetic steps, and production of many byproducts. Laser ablation in liquid (LAL) has emerged as a promising alternative to prepare materials that is single-step, fast, uses fewer precursors, produces fewer side products, and has simple purification steps. During LAL, a solid target is irradiated with a pulsed laser source. The laser pulses cause plasma plumes of the target material to form which are cooled, condensed, and can react …

Structure, Surface, And Interfacial Modifications Of Carbon And Supported-Metal Electrodes For Electrochemical Carbon Dioxide Conversion, Namal Wanninayake

Theses and Dissertations--Chemistry

Currently, the global emission of greenhouse CO₂ is over 36 billion tons per year. Consequently, the atmosphere's CO₂ concentrations have exceeded 400 ppm, which is the highest reported in the last three million years. The accumulation of CO₂ is the most critical origin for today's climate change; thus, closing the carbon cycle is vital to reverse the detrimental impacts of climate change. Under this goal, the electrochemical reduction of CO₂ into commodity fuels and chemicals via renewable energy is one of the most promising strategies to recycle CO₂. Despite significant progress made in electrocatalysis, …

Multi-Component Material For Solar Energy Conversion And Fundamentals Of Lead Acid Batteries, Crystal Ferels

Graduate Research Theses & Dissertations

Synthesis of complex inorganic materials is desirable because their complex composition allows more degrees of freedom and tunability, whose properties differ from their parent components. As an expansion on this concept, we synthesized a quinary compound Ce3FeWS3O6, using a molten flux method and a solvothermal method. The compound crystallizes into a hexagonal crystal system with space group P63/m. Its electric partition shows an anion with the form [(Ce3+)3W6+(S2-)3(O2-)6]3- forcing the transition metal Fe3+ state and leaving no conduction electrons, making the material a semiconductor. This compound is the right candidate as photoelectric material capable of absorbing photons from the solar …

Effects Of Hole Transporting Layers And Surface Ligands On Interface Energetics And Photovoltaic Performance Of Methylammonium Lead Iodide Perovskites, So Min Park

Theses and Dissertations--Chemical and Materials Engineering

Organic metal halide perovskites are promising materials for various optoelectronic device applications such as light emitting diodes (LED) and photovoltaic (PV) cells. Perovskite solar cells (PSCs) have shown dramatic increases in power conversion efficiency over the previous ten years, far exceeding the rate of improvement of all other PV technologies. PSCs have attracted significant attention due to their strong absorbance throughout the visible region, high charge carrier mobilities, color tunability, and ability to make ultralight weight devices. However, organic metal halide perovskites still face several challenges. For example, their environmental stability issue must be overcome to enable widespread commercialization. Meeting …

Multiscale Modeling Of Structure-Function Relationships Of Organic Semiconductors, Shi Li

Theses and Dissertations--Chemistry

While optoelectronic devices built from organic semiconductors (OSC) continue to find their way into the commercial landscape, there remain numerous challenges to overcome to supplant traditional semiconductors in many technologies. Chief among these are low performance metrics relative to devices with conventional semiconductors and device stability. In order to overcome these challenges, a wide range of new OSC and processing technologies have been developed. However, there remains limited fundamental understanding of the relationship between molecular structure, packing in the solid state, and the resulting materials properties. Here, we make use of multiscale molecular models and utilize classical all-atom molecular dynamic …

Threshold Ionization Spectroscopy And Spin-Orbit Coupling Of Lanthanide Complexes, Yuchen Zhang

Theses and Dissertations--Chemistry

The C-C and C-H bonds have high bond strength and low polarization, which make many small hydrocarbons too inert to react with other molecules under ambient pressure and temperature conditions. Therefore, activation of these bonds is required to convert such small molecules into other value-added chemicals. Among various bond activation methods, metal activation is widely used and reported in the literature, because of its relatively mild reaction conditions and high selectivity.

In this work, Ce atom reactions with several small hydrocarbons are carried out in a pulsed laser vaporization supersonic molecular beam source, and Ce -hydrocarbon species are observed with …

Towards The Rational Design Of Organic Semiconductors Through Computational Approaches, Qianxiang Ai

Theses and Dissertations--Chemistry

Though organic semiconductors have illustrated potential as industry-relevant materials for electronics applications, there are few guidelines that can take one from molecular design to functional materials. This limitation is, in part, due to incomplete understanding as to how the atomic-scale construction of the π-conjugated molecules that comprise the organic semiconductors determines the nature and strength of both the noncovalent intramolecular interactions that govern molecular conformation and noncovalent intermolecular interactions that regulate the energetic preference for solid-state packing. Hence, there remain several fundamental questions that need to be resolved in order to design organic semiconductors from a priori knowledge, including: What …

Designing Metal-Halide Perovskites With Enhanced Optical Properties And Stability Using Surface Ligands, Md Aslam Uddin

Theses and Dissertations--Chemistry

Metal-halide perovskites (MHPs), with formula ABX₃ (A = methylammonium, formamidinium, or Cs⁺; B = Sn²⁺ or Pb²⁺; and X = Cl^-, Br^-, or I^-) are versatile and attractive materials because of their tunable optical and electronic properties. These optical and electronic properties include tunable direct band gaps, high absorption coefficients, low exciton binding energies, relatively high electron and hole mobilities, narrow emission line-widths, and high photoluminescence (PL) quantum yields (Φ_PL). Much of the initial excitement around organic metal-halide perovskites focused on their application in photovoltaics (PVs) …

A Theoretical And Experimental Study Of Charge Transport In Organic Thermoelectric Materials And Charge Transfer States In Organic Photovoltaics, Ashkan Abtahi

Theses and Dissertations--Physics and Astronomy

Applications of organic electronics have increased significantly over the past two decades. Organic semiconductors (OSC) can be used in mechanically flexible devices with potentially lower cost of fabrication than their inorganic counterparts, yet in many cases organic semiconductor-based devices suffer from lower performance and stability. Investigating the doping mechanism, charge transport, and charge transfer in such materials will allow us to address the parameters that limit performance and potentially resolve them. In this dissertation, organic materials are used in three different device structures to investigate charge transport and charge transfer. Chemically doped π-conjugated polymers are promising materials to be used …

Three Studies Of Research-Based Pedagogy In Physical Chemistry: Development Of A Zno Thin Film Experiment, Analysis Of Student Discourse By Graph Theory And Cognitive Engagement, Building A Physical Chemistry Faculty Network., Dilhara Liyanage

Theses and Dissertations

Three research projects, each focusing on a different aspect, development of a ZnO thin film experiment, student’s cognitive engagement behavior, and building of a faculty network, are presented in this dissertation.

In the first project, a physical chemistry laboratory experiment was developed to answer the question, “How do electrons move in a solid?”. The experiment structure follows the POGIL-PCL (Process Oriented Guided Inquiry Learning - Physical Chemistry Laboratory) model. Students begin by using the PhET “Quantum Bound States” animation to compare energy levels for single atoms to energy levels of a lattice containing many potential wells, and they incorporate that …

Structure, Morphology And Composition-Property Elucidation Of Ni–Mo And Ni−Mo−P Nanocrystals For Water Splitting Reactions And Group Iv Alloy And Silicate Nanocrystals For Visible To Near Ir Optoelectronics, Ebtesam Hassan Abuelenein Eladgham

Theses and Dissertations

Abstract

Structure, Morphology and Composition-Property Elucidation of Ni–Mo and Ni−Mo−P Nanocrystals for Water Splitting Reactions and Group IV Alloy and Silicate Nanocrystals for Visible to Near IR Optoelectronics

by

Ebtesam Hassan Abuelenein Eladgham

A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at Virginia Commonwealth University.

Advisor: Indika U Arachchige

Associate Professor, Department of Chemistry

Nanomaterials have gained a great attention because of their unique physical properties with size intermediate between molecular materials and extended solids. They have a large surface to volume ratio and display size tunable physical properties that was not …

Metal-Oxide Nanostructures Fabricated From Reactive Laser Ablation In Liquid, Mallory G. John

Theses and Dissertations

The development of metal-oxide nanostructures is a growing area due to their applications in diverse fields spanning energy conversion and storage, chemical manufacturing, and en- vironmental technology. This interest in catalytically active nanomaterials has prompted the synthesis and investigation of highly functionalized nanoparticles (NPs), including core- shell, silicate-stabilized, and bi- and multi-metallic nanocomposites. While wet-chemical synthesis methods of metal-oxide nanostructures have led to several morphologies, compositions, and shapes, these syntheses often require high temperatures, toxic solvents or reducing agents, and long reaction times.

Laser synthesis and processing of colloids (LSPC) encompasses both ‘top down’ and ‘bottom up’ approaches to synthesize …

Probing Vibrational Wave Packets In Organophoshorous Molecules Using Femtosecond Time-Resolved Mass Spectrometry (Ftrms), Derrick Ampadu Boateng

Theses and Dissertations

The study of organophosphorus and nitroaromatic compounds is essential due to their suitability as models for understanding the dynamics of radiation induce damage to DNA sugar-phosphate backbone, and the detection of chemical warfare agents as well as nitroaromatic explosives (such as TNT). The ultrafast dynamics of these polyatomic radicals were studied using femtosecond time-resolved mass spectrometry (FTRMS), a versatile method that is capable of monitoring the ultrafast dynamics of rapid dissociation in the gas phase after the removal of an electron. The method uses a technique called pump-probe, which makes use of two time-delayed laser pulses. In this work, the …

Investigations Of Graphene-Supported Single-Atom Catalyst Model Ions In The Gas Phase, Michael Borrome

Theses and Dissertations

Recent developments in heterogeneous catalysis has led to the conception of single-atom catalysts (SACs), a class of catalysts based on isolated metal atoms anchored to a support scaffold. SACs are often much more reactive and can offer better selectivity when compared to nano-scale catalysts. In order to realize the full potential of SACs, a sound understanding of the underlying catalytic mechanisms is required. However, surface analysis tools can become less effective in studying catalytic mechanisms at the atomic scale. Mass spectrometry has proven to be a robust technique for studying organometallic catalytic mechanisms at the single-molecule level. Using mass spectrometry, …

Morphology Controlled Preparations And Electrochemical Properties Of Znco2O4 Electrode Materials For Supercapacitors, Yue-Shen Zhou, Meng Li, Shuang Wu, Zhao-Lei Li, Yan-Min Gao

Journal of Electrochemistry

In this work, hydrothermal reaction and high temperature were used to grow ZnCo₂O₄ active materials on Ni foam. The crystal stuctures and surface morphlogies of four samples were investigated by X-ray diffraction (XRD), field emission scanning electron microscopy (FESEM) and transmission electron microscopy (TEM). The electrochemical performances were characterized by cyclic voltammetry (CV), galvanostatic charge/discharge (GCD) testing and electrochemical impedance spectroscopy (EIS) on an electrochemical station. It can be seen that active materials tended to form denser stuctures with an increasing amount of NH₄F in the solution system and four different morphologies of ZnCo_{2 …}