Botany Commons^™

Potassium Fertilization Mitigates The Adverse Effects Of Drought On Selected Zea Mays Cultivars, Lixin Zhang, Mei Gao, Shengxiu Li, Ashok Kumar Alva, Muhammad Ashraf

Turkish Journal of Botany

In the present study, the role of potassium (K) in mitigating the adverse effects of drought stress (DS) on 2 maize (Zea mays L.) cultivars, 'Shaandan 9' (S_{9}; drought-tolerant) and 'Shaandan 911' (S_{911}; drought-sensitive), was assessed. K application increased dry matter (DM) across all growth stages and grain yield (GY) in both cultivars under DS, but not under control conditions. Drought-tolerant cultivar S_9 was superior to drought-sensitive cultivar S_{911} under DS in terms of DM and GY regardless of K addition. Additionally, K application increased relative water content, nitrate reductase activity, and concentrations of potassium ion, free proline, soluble protein, …

Biochemical Responses Of Triticale Plants Treated With Uv-B Irradiation And Nutrient Solution Enriched With Humic Acids, Dessislava Todorova, Iskren Sergiev, Irina Moskova, Zornitsa Katerova, Nina Georgieva, Vera Alexieva, Ida Brambilla, Sergio Mapelli

Turkish Journal of Botany

A natural substance extracted from coal with humic acids as its active ingredients, namely Biomin, was added to nutrient medium and applied to triticale roots 3 days prior to UV-B irradiation treatment. UV-B treatment increased malondialdehyde and anthocyanin contents and the activities of peroxidase and superoxide dismutase, while it decreased chlorophyll content, fresh weight, and shoot length. Catalase and total phenolics content did not change in UV-B-treated shoots. The pretreatment with Biomin showed favorable effects on growth, decreased the oxidative damage provoked by UV-B irradiation, increased the content of UV-B-absorbing compounds, and positively influenced enzymatic activities. The application of Biomin …

Bryophyte Flora Of Erciyes Mountain In Turkey, With 6 Bryophyte Records From The Country, Recep Kara, Tülay Ezer, Merve Can Gözcü, Şadi̇ye Gül Bozdoğan

Turkish Journal of Botany

In this study, the bryophyte flora of Erciyes Mountain was investigated. In total, 244 taxa were found in this area. Of these, 9 families, 9 genera, and 11 taxa belong to liverworts and 25 families, 72 genera, and 233 taxa belong to mosses. According to Henderson's grid-square system, 138 bryophyte taxa for the B8 square are new records. Among them, Leiocolea heterocolpos (Thed. ex Hartm.) H.Buch., Scapania obscura (Arn. & Jens.) Schiffn., Schistidium pulchrum H.H.Blom., Tortula lingulata Lindb., Bryum knowltonii Barnes, and Brachythecium capillaceum (F.Weber & D.Mohr) Giacom are new records for the bryophyte flora of Turkey. Polytrichastrum sexangulare (Brid.) …

Flower Closure In The Field Bindweed (Convolvulus Arvensis): A Field Test Of The Pollination Hypothesis, Pavol Prokop, Dominika Neupauerova

Turkish Journal of Botany

Although the behavioral plasticity of flower traits has received considerable attention, its adaptive value is not thoroughly understood. We experimentally examined flower opening/closure in field bindweed (Convolvulus arvensis), a species with short flower persistence (1 day) in which adaptive responses to pollination were not previously expected. In line with the pollination hypothesis we suggested that flower exposure in this species should respond to pollination. More specifically, we predicted that flower closure in the pollinated flowers would be quicker than that in unpollinated flowers. As predicted, the unpollinated flowers were open for a longer time than the pollinated flowers. There was …

Macromycetes Determined In Yomra (Trabzon) District, Ilgaz Akata, Yasi̇n Uzun, Abdullah Kaya

Turkish Journal of Botany

This study was carried out on macrofungi samples collected from Yomra district during 2007-2012, and 236 taxa belonging to 58 families were identified. Crocicreas cyathoideum (Bull.) S.E.Carp., Phaeohelotium fagineum (Pers.) Hengstm., and Dacrymyces chrysospermus Berk. & M.A.Curtis are recorded for the first time from Turkey. Calyptella capula (Holmsk.) Quél., Campanella caesia Romagn., and Guepiniopsis buccina (Pers.) L.L.Kenn. are the first members of the genera Calyptella Quél., Campanella Henn., and Guepiniopsis Pat. respectively, in Turkey.

The Colchic Region As Refuge For Relict Tree Lineages: Cryptic Speciation In Field Maples, Guido W. Grimm, Thomas Denk

Turkish Journal of Botany

ITS sequences from isolated populations of Acer in the Colchic region allow direct assumptions about the origin, evolution, and radiation of one of the most abundant West Eurasian tree species, Acer campestre L., the field maple. We inferred the molecular evolution of the internal transcribed spacers ITS1 and ITS2 of the nuclear-encoded 35S rDNA cistron in Acer campestre using a range of methods including sequence- and distance-based phylogenetic networks and motif analyses. The data basis for our inference are 344 sequenced clones from 51 individuals of A. campestre, essentially covering the modern distribution range of the species, and 27 individuals …

Nonsense-Mediated Decay Of Sucrose Synthase 1 Mrna With Induced Premature Chain Termination Codon During Cold Acclimation In Winter Wheat, Rita Armoniene, Gintaras Brazauskas

Turkish Journal of Botany

Cold acclimation induces the expression of cold-regulated genes needed to protect plants against freezing damage. Fourteen candidate genes were identified as being differentially expressed (presence/absence) between cold acclimated and nonacclimated crown and leaf tissues of 2 winter wheat lines using the cDNA-AFLP method. Two TILLING populations originating from the 2 winter wheat lines were further developed in order to create mutant forms of the candidate genes to verify their role in freezing-tolerance formation. Exon 8 of the identified differentially expressed sucrose synthase 1 (Ss1) gene was chosen for mutation detection by high-resolution melting analysis. A total of 75.68 kb of …

Identification And Characterization Of A Seed-Specific Grapevine Dehydrin Involved In Abiotic Stress Response Within Tolerant Varieties, Mohsen Hanana, Samia Daldoul, Romain Fouquet, Laurent Deluc, Celine Leon, Michael Hoefer, Francois Barrieu, Abdelwahed Ghorbel

Turkish Journal of Botany

To identify and isolate genes related to abiotic stress (salinity and drought) tolerance in grapevine, a candidate gene approach led to the isolation from Cabernet Sauvignon cultivar of a full-length cDNA of dehydrin gene. The latter, named VvDhn, which is highly and mainly induced in late embryogenesis in seeds, encodes for a protein of 124 amino acids with a predicted molecular mass of 13.3 kDa. Details of the physicochemical parameters and structural properties (molecular mass, secondary structure, conserved domains and motives, and putative posttranslational modification sites) of the encoded protein have also been elucidated. The expression study of VvDhn was …

Patterns Of Phylogeography And Vicariance Of Chamaerops Humilis L. (Palmae), Juan Luis García-Castaño, Anass Terrab, María Ángeles Ortiz, Tod Falor Stuessy, Salvador Talavera

Turkish Journal of Botany

Chamaerops humilis L. is 1 of 2 native palms occurring in Europe and the only native palm in the West Mediterranean region. Our aims were: (1) to describe its phylogeographic structure; (2) to infer a biogeographic scenario to explain its present distribution; and (3) to assess changes in its distribution from the last interglacial period. Twenty-two populations were sampled. An amplified fragment length polymorphism analysis produced 226 fragments, which allowed recognition of 4 groups of populations: (1) E Iberian Peninsula plus Al Hoceima (NE Morocco), the Balearics, and Sardinia; (2) France, the Italian Peninsula, and Sicily; (3) SW Iberian Peninsula …

Different Meal, Same Flavor: Cospeciation And Host Switching Of Haemosporidian Parasites In Some Non-Passerine Birds, Diego Santiago-Alarcon, Adriana Rodríguez-Ferraro, Patricia Parker, Robert Ricklefs

Biology Department Faculty Works

BackgroundPrevious studies have shown that haemosporidian parasites (Haemoproteus(Parahaemoproteus) and Plasmodium) infecting passerine birds have an evolutionary history of host switching with little cospeciation, in particular at low taxonomic levels (e.g., below the family level), which is suggested as the main speciation mechanism of this group of parasites. Recent studies have characterized diverse clades of haemosporidian parasites (H. (Haemoproteus) and H. (Parahaemoproteus)) infecting non-passerine birds (e.g., Columbiformes, Pelecaniiformes). Here, we explore the cospeciation history of H. (Haemoproteus) and H. (Parahaemoproteus) parasites with their non-passerine hosts.MethodsWe sequenced the mtDNA cyt b gene of both haemosporidian parasites and their avian non-passerine hosts. We …

Overexpression Of Patatin‐Related Phospholipase Aiii Δ Altered Plant Growth And Increased Seed Oil Content In Camelina, Xuemin Wang

Biology Department Faculty Works

Camelina sativa is a Brassicaceae oilseed species being explored as a biofuel and industrial oil crop. A growing number of studies have indicated that the turnover of phosphatidylcholine plays an important role in the synthesis and modification of triacylglycerols. This study manipulated the expression of a patatin‐related phospholipase AIIIδ (pPLAIII δ) in camelina to determine its effect on seed oil content and plant growth. Constitutive overexpression of pPLAIII δ under the control of the constitutive cauliflower mosaic 35S promoter resulted in a significant increase in seed oil content and a decrease in cellulose content. In addition, the content of major …

Identifying Promising New Falcata Alfalfa Populations For Use In Semiarid Rangelands, Derek Kannenberg

The Journal of Undergraduate Research

Alfalfa (Medicago sativa L.) is a valuable crop worldwide. In addition to its use as forage, the nitrogen fixation capabilities of root nodules make it a valuable component for improving soil health. Unfortunately, the semi-arid region of the Northern Great Plains introduces a number of environmental stresses that are detrimental to stand establishment and persistence. The ability to produce adventitious shoots from roots is generally considered a favorable trait for increasing stress resistance. This study aimed to identify alfalfa populations possessing the ability to produce adventitious shoot from root segments. Seven Plant Introductions (PIs), selected from the National Plant …

Contents, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Shattercane X Als-Tolerant Sorghum F1 Hybrid And Shattercane Interference In Als-Tolerant Sorghum, Rodrigo Werle, Jared J. Schmidt, John Laborde, Angela Tran, Cody F. Creech, John L. Lindquist

Department of Agronomy and Horticulture: Faculty Publications

ALS-tolerant grain sorghum cultivars are expected to be available for farmers within the next few years. Knowing that: (i) crosses between sorghum and shattercane are likely to occur resulting in crop-to-weed gene flow; (ii) ALS-susceptible shattercane X ALS-tolerant grain sorghum F1 hybrids (hybrids) were ultimately resistant to ALS-herbicides under field conditions; and (iii) hybrid fitness is equal to, or greater than, the wild parent, we conducted a greenhouse study to compare the competitive effect of shattercane and hybrid on sorghum, and whether or not herbicide application would influence the competitive ability of the hybrid …

Common Sunflower Seedling Emergence Across The U.S. Midwest, Sharon A. Clay, Adam Davis, Anita Dille, John Lindquist, Analiza H. M. Ramirez, Christy Sprague, Graig Reicks, Frank Forcella

Department of Agronomy and Horticulture: Faculty Publications

Predictions of weed emergence can be used by practitioners to schedule POST weed management operations. Common sunflower seed from Kansas was used at six Midwestern U.S. sites to examine the variability that 16 climates had on common sunflower emergence. Nonlinear mixed effects models, using a flexible sigmoidal Weibull function that included thermal time, hydrothermal time, and a modified hydrothermal time (with accumulation starting from January 1 of each year), were developed to describe the emergence data. An iterative method was used to select an optimal base temperature (T_b) and base and ceiling soil matric potentials (ψ_b and …

Genotyping By Sequencing For Genomic Prediction In A Soybean Breeding Population, Diego Jarquin, Kyle Kocak, Luis Posadas, Katie Hyma, Joseph Jedlicka, George L. Graef, Aaron Lorenz

Department of Agronomy and Horticulture: Faculty Publications

Background: Advances in genotyping technology, such as genotyping by sequencing (GBS), are making genomic prediction more attractive to reduce breeding cycle times and costs associated with phenotyping. Genomic prediction and selection has been studied in several crop species, but no reports exist in soybean. The objectives of this study were (i) evaluate prospects for genomic selection using GBS in a typical soybean breeding program and (ii) evaluate the effect of GBS marker selection and imputation on genomic prediction accuracy. To achieve these objectives, a set of soybean lines sampled from the University of Nebraska Soybean Breeding Program were genotyped using …

Identification And Validation Of Quantitative Trait Loci For Seed Yield, Oil And Protein Contents In Two Recombinant Inbred Line Populations Of Soybean, Xianzhi Wang, Guo‑Liang Jiang, Marci Green, Roy A. Scott, Qijian Song, D. L. Hyten, P. B. Cregan

Department of Agronomy and Horticulture: Faculty Publications

Soybean seeds contain high levels of oil and protein, and are the important sources of vegetable oil and plant protein for human consumption and livestock feed. Increased seed yield, oil and protein contents are the main objectives of soybean breeding. The objectives of this study were to identify and validate quantitative trait loci (QTLs) associated with seed yield, oil and protein contents in two recombinant inbred line populations, and to evaluate the consistency of QTLs across different environments, studies and genetic backgrounds. Both the mapping population (SD02- 4-59 × A02-381100) and validation population (SD02- 911 × SD00-1501) were phenotyped for …

Porocercospora Seminalis Gen. Et Comb. Nov., The Causal Organism Of Buffalograss False Smut, Bimal S. Amaradasa, Hugo Madrid, Johannes Z. Groenewald, Pedro W. Crous, Keenan L. Amundsen

Department of Agronomy and Horticulture: Faculty Publications

False smut caused by Cercospora seminalis is an important disease of buffalograss (Buchloe dactyloides) affecting seed production. The pathogen prevents normal caryopsis development and causes considerable yield loss and reduced seed germination. The current taxonomic placement of the false-smut causal pathogen in the genus Cercospora is incorrect based on its morphological characteristics and DNA phylogeny. In the present study the phylogenetic position of C. seminalis is clarified based on DNA sequence analysis of three loci namely the internal transcribed spacer (ITS) region, partial nuclear ribosomal large subunit (LSU) and partial sequences of the RNA polymerase II second largest …

Salicylic-Acid-Induced Recovery Ability In Salt-Stressed Hordeum Vulgare Plants, Hadi Pirasteh Anosheh, Gholamhassan Ranjbar, Yahya Emam, Muhammad Ashraf

Turkish Journal of Botany

The recovery ability of barley plants from salt stress conditions was assessed using foliar application of salicylic acid (SA) in a study conducted under controlled conditions. The barley plants (Hordeum vulgare L. 'Reyhan') were subjected to saline water with varying salinity levels (tap water 0.67 dS m^{-1} as control, 3, 6, 9, and 12 dS m^{-1}) from 14 to 42 days after sowing (DAS). Then the plants were subjected to recovery treatments for 4 weeks, from 42 to 70 DAS. The recovery treatments included: non-recovery (R_0), irrigation with tap water (R_1), and irrigation with tap water + 2 foliar applications …

A Comparative Study Of Taxonomy, Physicochemical Parameters, And Chemical Constituents Of Ganoderma Lucidum And G. Philippii From Uttarakhand, India, Ranjeet Singh, Gurpaul Singh Dhingra, Richa Shri

Turkish Journal of Botany

The genus Ganoderma consists of cosmopolitan polypore mushrooms, many of which can cause different types of rots in plants. Many species of this genus are being used for their medicinal and nutraceutical properties in many countries. The present study provides a comparative evaluation of taxonomy, physicochemical parameters, and chemical constituents of Ganoderma lucidum and G. philippii collected from different localities of Uttarakhand, India. The macroscopic and microscopic characters on the basis of which G. lucidum differs from G. philippii include habit, external basidiocarp characteristics, context, pore tube layers and pores, cutis type, and shape and size of basidiospores. The fruiting …

New Records Of Some Ascomycete Truffle Fungi From Turkey, Azi̇z Türkoğlu, Michael Angelo Castellano

Turkish Journal of Botany

We report the first records of 6 Ascomycete truffle taxa in Turkey: Genea verrucosa Vittad., Genea klotzschii Berk. & Broome, Stephensia bombycina (Vittad.) Tul. & C.Tul., Terfezia olbiensis Tul. & C.Tul., Tuber excavatum Vittad., and Tuber rufum Pico. We also report new localities within Turkey for Picoa juniperi Vittad., Terfezia leptoderma Tul. & C.Tul., Choiromyces meandriformis Vittad., Tuber brumale Vittad., Tuber nitidum Vittad., and Tuber mesentericum Vittad.

Leaf Morphology And Shoot Regeneration Of In Vitro Cultured Explants From Species Of The Solanum Peruvianum S.L. Complex, Carlos Trujillo-Moya, Rosa Peiró, Carmina Gisbert

Turkish Journal of Botany

We studied leaf morphology in in vitro plants of species segregated from the Solanum peruvianum L. s.l. complex: S. arcanum Peralta, S. corneliomulleri J.F.Macbr., S. huaylasense Peralta, and S. peruvianum L. s.str. In these species, the regeneration ability from root and leaf explants cultured in vitro in 2 organogenic media (SIM-1 and SIM-2) was also evaluated in a total of 16 accessions. These species can be differentiated by the number of leaflets, leaflet dentation of the in vitro cultured plants, and leaf area (for S. arcanum). Regarding regeneration, intraspecific and interspecific variability was observed. The accession LA-2185 of S. arcanum …

New Lauraceous Species From The Siwalik Forest Of Arunachal Pradesh, Eastern Himalaya, And Their Palaeoclimatic And Palaeogeographic Implications, Mahasin Ali Khan, Subir Bera

Turkish Journal of Botany

Leaf remains of 4 lauraceous taxa collected from the Siwalik sediments (Middle Miocene to Pliocene) of Arunachal Pradesh of eastern Himalaya are described in the present communication. One fossil leaf, Cinnamomum palaeobejolghota sp. nov., was recovered from the lower part of the Siwalik succession (Dafla Formation; Middle to Upper Miocene), while Persea mioparviflora sp. nov., Persea preglaucescens sp. nov., and Lindera neobifaria sp. nov. were collected from the middle part of the Siwalik succession (Subansiri Formation; Pliocene) of Arunachal sub-Himalaya. The geographic distribution of the fossils and their modern counterparts is discussed and on that basis tropical vegetation under warm …

Molecular Phylogeny Of Chlorella-Related Chlorophytes (Chlorophyta) From Anatolian Freshwaters Of Turkey, Özgür Baytut, Cem Tolga Gürkanli, Ari̇f Gönülol, İbrahi̇m Özkoç

Turkish Journal of Botany

This study aimed to investigate molecular taxonomic diversity of unicellular chlorophyte strains in the northern Anatolian freshwater habitats of Turkey. Five strains were isolated from various habitats i.e. salty lagoons, shallow lakes, or slow-flowing creeks. The habitats chosen were Cernek lagoon (Kızılırmak Delta, Samsun), Kara lake (Çubuk, Ankara), Sarıkum lagoon (Sinop), and Sırakaraağaçlar creek (Sinop). Although the observations based on light microscopy showed no significant differences in cell morphologies, phylogenetic analysis based on nucleotide sequences of nuclear 18S rDNA and chloroplast 16S rDNA regions suggested that our isolates are related to 3 chlorophyte species: Chlorella vulgaris Beijerinck (S705, S706, and …

Morphology Of The Seed Coat Of Oxalis Spp. From Buenos Aires Province (Argentina), Sonia Rosenfeldt, Beatriz Gloria Galati

Turkish Journal of Botany

The aim of the present study is to provide detailed morphological descriptions of the seed coat in 10 species of Oxalis from Buenos Aires Province, Argentina, using light microscopy and scanning electron microscopy. The seed is ovate and brown, and its surface is smooth. Oxalis has a mechanism of spermobolia by which a part of the seed coat is detached by the rupture of cells, leaving exposed a layer of opened cells, generally with oxalate crystals. This new coat surface has different characteristics in the species studied in this work. Three types are recognized, mostly on the basis of anatomical …

Subcellular Localization And Developmental Regulation Of Cytosolic, Soluble Pyrophosphatase Isoforms In Arabidopsis Thaliana, Zahi̇de Nesli̇han Öztürk, Steffen Greiner, Thomas Rausch

Turkish Journal of Botany

Pyrophosphate (PP_{I}) is the by-product of several reversible key reactions of primary metabolism. Thus, generated PP_i should be removed by hydrolysis via pyrophosphatases to prevent accumulation and to drive anabolism. In plastids, a plastidic, soluble pyrophosphatase splits PP_i released by ADPG pyrophosphorylase. The cytosolic PP_i pool is believed to be hydrolyzed by tonoplast- and/or Golgi-integral H^{+}-translocating pyrophosphatases. The Arabidopsis thaliana (L.) Heynh. genome encodes 6 soluble pyrophosphatase isoforms (PPas), 1 of which was shown to be localized in plastids. The remaining 5 of those PPas (PPas 1-5) are more similar to each other with highly conserved protein sequences. They all …

Sfa Gardens Newsletter, Winter 2014-15, Sfa Gardens, Stephen F. Austin State University

SFA Gardens Newsletters

No abstract provided.

Identification Of A Sphingolipid Α-Glucuronosyltransferase That Is Essential For Pollen Function In Arabidopsis, Emilie A. Rennie, Berit Ebert, Godfrey P. Miles, Rebecca E. Cahoon, Katy M. Christiansen, Solomon Stonebloom, Hoda Khatab, David Twell, Christopher J. Petzold, Paul D. Adams, Paul Dupree, Joshua L. Heazlewood, Edgar B. Cahoon, Henrik Vibe Scheller

Department of Agronomy and Horticulture: Faculty Publications

Glycosyl inositol phosphorylceramide (GIPC) sphingolipids are a major class of lipids in fungi, protozoans, and plants. GIPCs are abundant in the plasma membrane in plants, comprising around a quarter of the total lipids in these membranes. Plant GIPCs contain unique glycan decorations that include a conserved glucuronic acid (GlcA) residue and various additional sugars; however, no proteins responsible for glycosylating GIPCs have been identified to date. Here, we show that the Arabidopsis thaliana protein INOSITOL PHOSPHORYLCERAMIDE GLUCURONOSYLTRANSFERASE1 (IPUT1) transfers GlcA from UDP-GlcA to GIPCs. To demonstrate IPUT1 activity, we introduced the IPUT1 gene together with genes for a UDP-glucose dehydrogenase …

Identification Of Differentially Expressed Genes Between Sorghum Genotypes With Contrasting Nitrogen Stress Tolerance By Genome-Wide Transcriptional Profiling, Malleswari Gelli, Yongchao Duo, Anji Reddy Konda, Chi Zhang, David R. Holding, Ismail M. Dweikat

Department of Agronomy and Horticulture: Faculty Publications

Background: Sorghum is an important cereal crop, which requires large quantities of nitrogen fertilizer for achieving commercial yields. Identification of the genes responsible for low-N tolerance in sorghum will facilitate understanding of the molecular mechanisms of low-N tolerance, and also facilitate the genetic improvement of sorghum through marker-assisted selection or gene transformation. In this study we compared the transcriptomes of root tissues from seven sorghum genotypes having differential response to low-N stress.

Results: Illumina RNA-sequencing detected several common differentially expressed genes (DEGs) between four low-N tolerant sorghum genotypes (San Chi San, China17, KS78 and high-NUE bulk) and three …

Low-Copy Nuclear Gene And Mcgish Resolves Polyploid History Of Eleusine Coracana And Morphological Character Evolution In Eleusine, Qing Liu, Bin Jiang, Jun Wen, Paul Michael Peterson

Turkish Journal of Botany

Eleusine coracana (L.) Gaertn. (finger millet) is the third most important cereal crop in semiarid regions of the world, but the degree of relatedness of finger millet with other species in the genus is unverified. The study of morphological character evolution in Eleusine Gaertn. has lagged behind due to lack of relevant research. Polyploidy history of finger millet was analyzed using waxy sequences together with multicolor genomic in situ hybridization (McGISH). In the waxy phylogenetic tree, sequences of 2 homoeologous loci were isolated from 3 tetraploids: Eleusine coracana, E. africana Kenn.-O'Byrne, and E. kigeziensis S.M.Phillips. The 3 species grouped with …