Botany Commons^™

Techniques And Trials In Pteridophyte Conservation And Cultivation, Jessica Bartel

Senior Theses and Projects

With the progressive nature of climate change conditions globally over the past century, there has been increasing focus on conservation of all species, but particularly those already endangered. Over 12,000 species of ferns live on Earth, and they do not produce seeds, so an investigation into their spores and how they reach maturity will allow us to preserve more genetic material in the future for these species. As a result, we investigated ex situ conservation and survivability of in vitro cultured gametophytes of within the genus Dryopteridaceae through herbarium sample germination rates across samples representing a wide age range ( …

Arkansas Soil Erosion And Conservation Methods In Ornamental Landscapes, Abby J. Cutsinger

ATU Research Symposium

This study will attempt to identify the best soil erosion mitigation methods for Arkansas ornamental landscape settings by comparing the strengths and weaknesses of known techniques. Since soil is not a renewable resource, we must apply conservation practices wherever possible, not just in agricultural settings. To determine the most effective erosion prevention techniques, this study will review soil studies conducted by the NRCS and NASA, as well as articles on best practices observed in ornamental landscape and agricultural industries. These are analyzed by comparing and contrasting techniques against known problems with Arkansas soil to determine which methods are most effective. …

Modelling The "Bottom-Up" Development Pattern Of Tar Spot Disease In Corn, Brenden Lane, Joaquín Guillermo Ramírez-Gil, Carlos Góngora-Canul, Mariela Sofia Fernandez Campos, Andres Cruz-Sancan, Fidel E. Jiménez-Beitia, Alex G. Acosta-Guatemal, Wily Sic, C. D. Cruz

Graduate Industrial Research Symposium

In 2015, the corn-infecting pathogen Phyllachora maydis (causal agent of tar spot disease) was reported for the first time in the United States. The disease has since spread across the US, causing major yield losses. In 2021 alone, 5.88 million metric tons (231.3 million bushels) of US corn yield were lost to this disease, costing an estimated US$1.25 billion. Though fungicides can protect against these agroeconomic losses, application timing can be difficult to optimize because our understanding of tar spot dynamics is still evolving. The current view is that tar spot typically develops bottom-up through a repeating infection cycle. Because …

Automated Tree Mortality Detection Using Ubiquitously Available Public Data, Michael T. Huggins

Master's Theses

Understanding the dynamic interplay between fire severity, topography, and tree mortality, is crucial for predicting future forest dynamics and enhancing resilience against climate change-induced wildfire regimes. This thesis develops a multi-sensor approach for automated estimation of tree mortality, then applies it to examine trends in tree mortality over a six-year period across a fire affected study site in the Trinity River basin in Northern California. The Random Forest model uses publicly available USGS 3D Elevation Program Lidar (3DEP) and NAIP imagery as inputs and is likely to be easily adaptable to other landscapes. The model had a Receiver Operating Characteristic …

Toward A Coordinated Understanding Of Hydro-Biogeochemical Root Functions In Tropical Forests For Application In Vegetation Models, Daniela F. Cusack, Bradley Christoffersen, Chris M. Smith-Martin, Kelly M. Andersen, Amanda L. Cordeiro, Katrin Fleischer, S. Joseph Wright, Nathaly R. Guerrero-Ramírez, Laynara F. Lugli, Lindsay A. Mcculloch, Mareli Sanchez-Julia, Sarah A. Batterman, Caroline Dallstream, Claire Fortunel, Laura Toro, Lucia Fuchslueger, Michelle Y. Wong, Daniela Yaffar, Joshua B. Fisher, Marie Arnaud, Lee H. Dietterich, Shalom D. Addo-Danso, Oscar J. Valverde-Barrantes, Monique Weemstra, Jing Cheng Ng, Richard J. Norby

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Tropical forest root characteristics and resource acquisition strategies are underrepresented in vegetation and global models, hampering the prediction of forest–climate feedbacks for these carbon-rich ecosystems. Lowland tropical forests often have globally unique combinations of high taxonomic and functional biodiversity, rainfall seasonality, and strongly weathered infertile soils, giving rise to distinct patterns in root traits and functions compared with higher latitude ecosystems. We provide a roadmap for integrating recent advances in our understanding of tropical forest belowground function into vegetation models, focusing on water and nutrient acquisition. We offer comparisons of recent advances in empirical and model understanding of root characteristics …

Reducing Food Scarcity: The Benefits Of Urban Farming, S.A. Claudell, Emilio Mejia

Journal of Nonprofit Innovation

Urban farming can enhance the lives of communities and help reduce food scarcity. This paper presents a conceptual prototype of an efficient urban farming community that can be scaled for a single apartment building or an entire community across all global geoeconomics regions, including densely populated cities and rural, developing towns and communities. When deployed in coordination with smart crop choices, local farm support, and efficient transportation then the result isn’t just sustainability, but also increasing fresh produce accessibility, optimizing nutritional value, eliminating the use of ‘forever chemicals’, reducing transportation costs, and fostering global environmental benefits.

Imagine Doris, who is …

A Multi-Model Approach To Understanding Growth, Reproduction, And Life History Strategies In Bromeliads, Erin N. Bodine

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Variation Of Carbon Stock Of Boca Del Drago Mangrove Forests Based On Salinity And Seaward Proximity, Fiona Wyrtzen

Independent Study Project (ISP) Collection

Mangrove forests, at the intersection of land and sea, are considered one of the most important marine environments for their variety of ecosystem services and their ability to sequester large amounts of carbon in their biomass and adjacent soils. With a changing climate, many of the abiotic and biotic factors influencing mangroves will begin to shift, potentially impacting resilience, growth capacity, and distribution of mangroves worldwide. This study aimed to examine the influence of changing salinity on the carbon stock capacity for Rhizophora mangle and Laguncularia racemosa forests, and the distribution of biomass in each species relative to salinity in …

Community Complexity Of A Pollination Network: Analysis Of Plant-Pollinator Interactions In The Eastern Ecuadorian Cloud Forest, Anisa López-Ruiz

Independent Study Project (ISP) Collection

Global declines in pollinators and temporal/spatial mismatches between plants and pollinators threaten the integrity of plant-pollinator networks. Ecological network analysis provides a powerful framework for understanding the dynamics of plant-pollinator networks and measures of community complexity that can help inform areas of priority in conservation. This study observed a plant-pollinator network in a secondary forest close to the Río Zuñac Reserve in the eastern Ecuadorian cloud forest to identify assemblages of plants and pollinators and evaluate measures of community complexity, including specialization and nestedness. Flowering plants were identified and observed along a 1.2 km transect, and floral visitors to these …

Friends In High Places: Establishing Pollination Networks For The Páramos Of Central Ecuador, Emma Diaz

Independent Study Project (ISP) Collection

Well-known for being a global biodiversity hotspot, the Andean Páramos hosts a unique array of floristic diversity seen nowhere else in the world (Luteyn, n.d.). With the resiliency of this ecosystem dependent on the successful reproduction of these plants, it is crucial to understand the pollination network which sustains them. Modern-day research has outlined networks in the Chilean, Venezuelan, and Argentinean Páramos, but one has yet to be defined for Ecuador, despite being the suspected home to nearly half of floristic diversity in the Páramos (Arroyo et al., 1985; Pelayo et al., 2021; Medan et al., 2023; Caranqui et al., …

Evaluation Of Native Plant Communities On Nebraska Game And Parks Commission State Parks, Robert F. Steinauer

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report evaluates the Native Plant Communities on Nebraska Game and Parks Commission State Parks East Region, also known as Region 3, which includes much of northeast and extreme eastern Nebraska, including portions of the lower Niobrara, Elkhorn and Platte Rivers and nearly the entire east border formed by the Missouri River. Fifteen state-listed threatened and endangered species have been recorded within the boundaries of Region 3 within the last twenty years. Several of these occupy habitats within major river channels.

Surveyed areas which contained habitat for legally protected species include Dead Timber State Recreation Area, Indian Cave State Park, …

Investigating The Role Of Plant Traits And Interactions In Emergent Wetland Nutrient Removal, Andrew Ryan Sample

Theses and Dissertations

Increasing wetland restoration in the Lower Mississippi Alluvial Valley has been identified as a method to reduce nutrient loading in the Gulf of Mexico. Wetlands have historically been used to treat water through processes facilitated by wetland plants, and relatively few species and plant traits have been identified as important in carrying out these processes. This study focuses on some of those species and traits and aims to identify species differences and plant traits that may be important for wetland nutrient mitigation. Chapter I provides background information on nutrient pollution, wetland biogeochemical mechanisms for nutrient sequestration, and the focal species …

Updating The Dual C And O Isotope—Gas-Exchange Model: A Concept To Understand Plant Responses To The Environment And Its Implications For Tree Rings, Rolf T. W. Siegwolf, Marco M. Lehmann, Gregory R. Goldsmith, Olga V. Churakova (Sidorova), Cathleen Mirande-Ney, Galina Timoveeva, Rosmarie B. Weigt, Matthias Saurer

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The combined study of carbon (C) and oxygen (O) isotopes in plant organic matter has emerged as a powerful tool for understanding plant functional responses to environmental change. The approach relies on established relationships between leaf gas exchange and isotopic fractionation to derive a series of model scenarios that can be used to infer changes in photosynthetic assimilation and stomatal conductance driven by changes in environmental parameters (CO₂, water availability, air humidity, temperature, nutrients). We review the mechanistic basis for a conceptual model, in light of recently published research, and discuss where isotopic observations do not match our …

Factors Affecting Apothecia Production And Primary Infection By Monilinia Vaccinii-Corymbosi On Vaccinium Angustifolium, Ian Leonard

Electronic Theses and Dissertations

Mummy berry, caused by Monilinia vaccinii-corymbosi (MVC), is a prolific disease of Vaccinium angustifolium (wild blueberry) leading to decreased yield in wild blueberry fields throughout the Downeast (DE) and Midcoast (MC) regions of Maine (ME). This study aimed to identify factors affecting primary inoculum production and infection by MVC on wild blueberry, and what bud stages of wild blueberry are most susceptible to infection. Through common garden (CGE), field and incubation experiments conducted in 2021 and 2022, factors affecting carpogenic germination of MVC pseudosclerotia and relationships between susceptible wild blueberry buds and environmental factors were analyzed. The CGE conducted in …

Effects Of Nonnative Plants On Space-Use In Eastern Box Turtles, Emily Ilene Crago

Graduate Theses

Introduction of nonnative plants outside their natural range has caused widespread reduction in the abundance and diversity of native plant species. Nonnative plants typically form dense, often monotypic, thickets that affect the ability of animals to find food, reproduce, avoid predation risk, and thermoregulate. By doing so, nonnative plants have the potential to displace resident animals from areas otherwise suitable as animal habitat. However, limited studies have investigated whether resident animals avoid areas dominated by nonnative plants. This study investigated impacts of nonnative plants on eastern box turtles (Terrapene carolina carolina), a species that has been declining throughout their range. …

The Bellarmine Bee Bed: Organizing A Native Plant Garden Using Feedback From The Local Community, Kate Moran

Undergraduate Theses

Animal pollinators are the cornerstone of healthy ecosystems. Their survival is essential for the persistence of entire food chains: from the flowers they cross-pollinate directly, to the animals who depend on those plants for nutrition. The establishment of pollinator gardens—particularly ones that consist of native plants—is an effective way to enhance their biodiversity, abundance, and well-being.

The main goal of this thesis is to construct a pollinator garden that maximizes the benefits for animal pollinators using feedback from local gardeners. A survey was used to gather information about the popularity and preferences of 40 flowering plants, and after analyzing the …

Physiological And Transcriptomic Responses Of Two Artemisia Californica Populations To Drought: Implications For Restoring Drought-Resilient Native Communities, Hagop S. Atamian Dr., Jennifer L. Funk

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

As climate change brings drier and more variable rainfall patterns to many arid and semi-arid regions, land managers must re-assemble appropriate plant communities for these conditions. Transcriptome sequencing can elucidate the molecular mechanisms underlying plant responses to changing environmental conditions, potentially enhancing our ability to screen suitable genotypes and species for restoration. We examined physiological and morphological traits and transcriptome sequences of coastal and inland populations of California sagebrush (Artemisia californica), a critical shrub used to restore coastal sage scrub vegetation communities, grown under low and high rainfall environments. The populations are located approximately 36 km apart but …

Variation In The Growth Parameters And Biomass Of Rhizophora Mangle Seedlings With Distances From Playa Estrella, Bocas Del Toro, Panama, Thiny Tep

Independent Study Project (ISP) Collection

Mangrove is a salt-tolerant, intertidal, tropical tree or shrub and make up a rich community of various organism. On the Caribbean coast of Panama, in Bocas del Toro, mangrove forests cover 28 km² and are dominated by R. mangle, followed by L. racemosa and A. germinans. Simultaneously, Isla Colón, the most populated and developed among all islands in the Bocas del Toro Archipelago, is a tourist center. Unfortunately, tourism comes at the price of environmental degradation via alteration of natural habitats, solid and wastewater pollution. Therefore, this study aims to gain a preliminary understanding on how the …

Prevalence Of Hesperevax Sparsiflora Var. Brevifolia (Short-Leaved Evax) At Ocean Ranch, Humboldt County, California: Exploring The Effects Of Disturbance, Shelby Diquirco, Matthew Estrada, Alana T. Fraley, Alexander D. Smith

Environmental Science & Management Senior Capstones

The prevalence of special-status plants within a landscape can be an indicator of the ecological health of that site, and therefore inform restoration efforts and post-restoration monitoring. Hesperevax sparsiflora var. brevifolia (short-leaved evax) is a special status species found within the Ocean Ranch unit of Humboldt, California. A primary threat to native plant communities are invasive plant species. Coastal dune ecosystems are largely dominated by invasive species, including Ammophila arenaria (European beachgrass). To work towards the eradication of A. arenaria, the California Department of Fish and Wildlife utilized treatment combinations of herbicide and prescribed fire at Ocean Ranch in …

Using Micro Satellites To Assess The Impact Of Algae Growth On Global Warming, Hursh, Vanessa

Student Works

Data gathered from microsatellites can inform policymakers and environmental agencies about the impact of algae on global warming. It can guide the development of strategies to mitigate or harness the potential benefits of algae growth.

Competition And Herbivory Influence The Survival, Growth, And Physiology Of Native Tree Seedlings In The Kentucky Inner Bluegrass Savanna-Woodland, James D. Shaffer

Theses and Dissertations--Biology

Terrestrial plant communities are shaped by competition for resources, herbivory, and abiotic processes. Savanna systems represent a dynamic coexistence of contrasting life forms (grasses and trees) shaped by competition and disturbance. The Kentucky Inner Bluegrass Savanna-Woodland (KIBSW) is described as an open woodland of shade intolerant species; however, climatic, and edaphic conditions can support closed-canopy forest. After European pioneer settlement (c1750-1800), over 99% of “savanna-woodlands” have been lost. KIBSW remnants are experiencing a recruitment failure, leading to a dominance shift in tree communities. I researched how tree-grass competition and mammalian herbivory influence KIBSW regeneration and maintenance. The KIBSW does not …

Quantifying The Carbon Stored And Sequestered By The Trees On Pomona College’S Campus, Paola A. Giron-Carson

Scripps Senior Theses

We are experiencing a climate crisis that must be confronted with strategic mitigation. Pomona College contributes to the climate crisis through its emissions for which there is a baseline record. However there is no baseline record of the climate mitigation currently performed by the trees on Pomona’s campus through carbon storage. This study seeks to determine a current baseline quantity of carbon stored and sequestrated by Pomona’s trees as well as possible courses of climate mitigation for Pomona College to take. Initial information gathering was conducted through interviews with several stakeholders. This study was conducted using data collected prior to …

Macrolichen Inventory Of The Horse Mountain Botanical Area, Six Rivers National Forest, California, Usa, Sarah Norvell Conway

Cal Poly Humboldt theses and projects

Macrolichen diversity and community composition was determined for an area of high botanical interest in the Coast Ranges of Northern California – the Horse Mountain Botanical Area (HMBA) in Six Rivers National Forest. The Coast Ranges have been suggested to have high epiphytic macrolichen diversity, yet detailed site-specific macrolichen surveys are lacking for the area. Here we present comprehensive data on macrolichens of the HMBA integrated with environmental metadata at the landscape level. Twenty 0.4 ha sampling plots were positioned across the varying habitats of the HMBA and macrolichens were intensively sampled from all substrata. Out of 888 total collections, …

Changes And Relationships Of Soil Aluminum, Organic Matter, And Hydrogen Ion Concentration With Rye Cover Crop, Arron Wilder

Cal Poly Humboldt theses and projects

Soil acidity is a common agricultural problem worldwide, as approximately 50% of all potentially arable soils are affected by pH limitations. At soil pH 3+) is considered to be the chemical form of aluminum in acid soil that hinders plant growth the most. Potentially, soil organic matter (SOM) can ameliorate the toxic effects of Al³⁺ on plants and microbes by binding with Al³⁺, thus preventing Al³⁺ (and other species of aluminum) from interacting in the rhizosphere. Increasing SOM also increases soil health indicators (i.e., microbial activity, soil water holding capacity, aggregate stability, porosity, etc.) while the …

Winter Dynamics Of Storm Water Management Ponds And Winter Tolerance In Three Aquatic Plant Species, Patrick Strzalkowski

Theses and Dissertations (Comprehensive)

The vast majority of the research into the performance of stormwater management ponds (SWMPs) has been performed in warm regions or during the warmer seasons in temperate regions. It is presumed that SWMPs are inactive in the winter as any potential stormwater is trapped in snow and ice. The main goal of this thesis was to test this presumption and to study the dynamics and performance of three SWMPs during the winter. Remote water level loggers were installed into the three SWMPs and daily grab samples from the influents and effluents were taken and analyzed for total phosphorus (TP), chloride, …

Distribution And Soil Characteristics Associated With The Neches River Rose-Mallow (Hibiscus Dasycalyx), Morgan E. Langlinais

Electronic Theses and Dissertations

The Neches River rose-mallow, Hibiscus dasycalyx, is a rare herbaceous perennial endemic to East Texas. The threatened, obligate wetland species is currently at risk of being lost in the wild due to habitat loss, encroachment of nonnative and native plant species, and hybridization with two other Hibiscus congeners, Hibiscus laevis and Hibiscus moscheutos. Known locations of each of the three Hibiscus species were used to measure select soil characteristics and habitat variables associated with each of the rose-mallows. H. dasycalyx was concluded to be associated with more fertile soils and slightly more canopy coverage than H. laevis and …

The Impact Of Policy Design On Willingness To Pay For Ecosystem Services From Prairie Strips, Karina Schoengold, Badri Khanal, Taro Mieno, Lisa Schulte Moore

Cornhusker Economics

Ecosystem services from farmland conservation are public good benefits. The value of these benefits is primarily measured using methods that determine the willingness to pay (WTP) for those benefits. Prairie strips, a farmland conservation practice, provide ecosystem services such as improved water quality, soil health, and biodiversity (Schulte et al., 2017). The state of Iowa is a major corn producer and contributes significant amounts of nitrogen and phosphorous to the Gulf of Mexico (Alexander et al., 2008). The development of conventional agricultural systems has also resulted in a significant loss of biodiversity, including a dominant land cover of tallgrass prairie. …

Technical Note: On Uncertainties In Plant Water Isotopic Composition Following Extraction By Cryogenic Vacuum Distillation, Haoyu Diao, Philipp Schuler, Gregory R. Goldsmith, Rolf T. W. Siegwolf, Matthias Saurer, Marco M. Lehmann

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Recent studies have challenged the interpretation of plant water isotopes obtained through cryogenic vacuum distillation (CVD) based on observations of a large 2H fractionation. These studies have hypothesized the existence of an H-atom exchange between water and organic tissue during CVD extraction with the magnitude of H exchange related to relative water content of the sample; however, clear evidence is lacking. Here, we systematically tested the uncertainties in the isotopic composition of CVD-extracted water by conducting a series of incubation and rehydration experiments using isotopically depleted water, water at natural isotope abundance, woody materials with exchangeable H, and organic materials …

Hummingbird Diversity, Abundance, And Feeding Interactions Across Three Floral Communities On Mount Totumas, Chiriquí, Panamá, Zachary Ginn

Independent Study Project (ISP) Collection

(Trochilidae) are a large Neotropical bird family of nectar-feeders that have evolved as pollinators of many Neotropical plants. Interactions between hummingbirds and plants form mutualistic networks that may change in structure over environmental and anthropogenic gradients. While the unique dynamics of hummingbird diversity and floral interactions have been studied throughout the Neotropics, differing drivers between locations emphasizes the need for further local research. This deficit is especially crucial in biodiverse and understudied locations like the Western Highlands of Panamá. In this study, I investigated how hummingbird diversity, abundance, and floral interactions differed between Cloud Forest, Garden, and Oak Forest on …

Investigating Primary Succession Following The Retreat Of The Breiðamerkurjökull Glacier, Iceland, Ella Roelofs

Independent Study Project (ISP) Collection

The accelerating rates of glacier retreat around the world as a result of climate change make the study of primary succession in expanding forefields increasingly important. While this is a well studied topic in many parts of the world, little data exists specific to Iceland. This study investigated vegetation development along a chronosequence of eight time periods in the Breiðamerkurjökull outwash plain. Data was collected on percent vegetation cover, dominant species, the number of unique plant groups, and percent cover of five substrate types at 10 plots (0.55 x 0.55 m quadrats) per time period. Important findings include the fact …