Marine Biology Commons^™

Key To The Species Of Aetideidae Bradyidius Occurring In The China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Key To The Species Of Aetideidae Bradyetes Occurring In The China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Key To The Species Of Aetideidae Aetideus Occurring In The China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Key To The Species Of Acartiidae Acartia Occurring In The China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Key To The Calanoid Copepods In The China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Islands In The Mud: The South Texas Banks Provide Crucial Mesophotic Habitat For Coral Communities, Maria Bollinger, Keir J. Macartney, Erin E. Easton, David Hicks

School of Earth, Environmental, & Marine Sciences Faculty Publications

On the continental shelf off the coast of South Texas lie a series of natural hard-bottom structures (rocky outcrops and relic coral-algal reefs) known as the South Texas Banks (STB), which provide critical habitat for benthic organisms and pelagic fish. The depth of the banks, a persistent nepheloid layer, and strong currents have resulted in few studies that provide quantitative biodiversity data on the STB. Using a remotely operated vehicle (ROV), video surveys were conducted to quantitatively describe the mesophotic coral communities and assess habitat suitability of five STB: North Hospital, Hospital, Southern, Big Adam, and Mysterious Banks. Each of …

Unexpected Opportunities For Manatee (Trichechus Manatus Latirostris) Education And Citizen Science, Yvanna M. Strait, Amy Hirons

Marine & Environmental Sciences Faculty Articles

The Florida manatee (Trichechus manatus latirostris) mainly resides within the state's coastal waters, but sharing this habitat with thousands of watercrafts, either registered, unregistered, or visiting, has proven challenging for its survival. The future of manatee research among scientists and citizen scientists has strong potential. By taking advantage of venues of opportunity such as boat shows, not only is local population data gathered, but a stronger positive relationship with the public is forged. When people feel they have a stake in the conservation of a species or habitat, they will likely become and remain engaged.

Larval Fish Export In Response To Varying Compensating Gate Discharge At The Sault Rapids, St. Marys River, Signe F.K. Vandrunen

All NMU Master's Theses

The St. Marys River (SMR) forms the border between Michigan, USA and Ontario, Canada connecting lakes Superior and Huron. Discharge is controlled by a compensating gate system upstream of the SMR rapids. Because spring and summer discharge fluctuates widely, resource managers required information on how flow variability influences larval fish drift. I estimated annual larval fish export in relation to variable discharge during 2018-2021 and compared results to published habitat model predictions. Mean discharge and water temperature were lowest in 2021 and highest in 2019. Water warming rates during high discharge differed from low discharge trends. Across years, I identified …

Evaluating Acid-Aluminum Stress In Streams Of The Northeastern U.S. At Watershed, Fish Community And Physiological Scales, Benjamin J. Zdasiuk, Celia Y. Chen, Stephen D. Mccormick, Keith H. Nislow, Joel Singley, John T. Kelly

Arts & Sciences Faculty Publications

In spite of overall improvements in air and water quality, biological stress from low pH and high concentrations of inorganic aluminum continue to impact fish and fish habitat in northeastern North America, with independent and interactive effects on individuals, populations and communities. Integrative indicators can therefore be useful in monitoring both impact and recovery across multiple scales. Using coupled water chemistry (pH, conductivity, and base cation and inorganic aluminum concentration), geographic (site elevation and watershed area) and biological (fish diversity, fish abundance, gill aluminum concentration and gill physiology) data, we developed an integrated indicator of acid-aluminum stress across the White …

Impacts Of Algal Morphology And Water Flow On Macroalgal Microplastic Capture, Cheyenne M. Adams

Honors College Theses

Microplastic pollution is a major area of concern in marine environments, especially as microplastics enter the food web. This study used pipe cleaners and two lichen species as algal mimics, and Chaetomorpha sp. and Chondrus crispus as model algal species to test the effects of morphology and biomass on microbead and foam capture. This study also utilized two different water flow methods: vortices and waves. Results suggest that water flow, as well as biomass and morphology, play a role in microplastic capture in macroalgae. For all mimics and algal species, except Cladonia lichens, turfs with increased biomass and length showed …

Stability Of Fishes Assemblage Structure Over A Lustrum In Coastal Wetlands Under Different Disturbances In An Industrial Zone Of The Central Gulf Of Mexico Coast, Carlos E. Cintra-Buenrostro, Alejandro Fierro-Cabo

School of Earth, Environmental, & Marine Sciences Faculty Publications

Shallow coastal wetlands within the territory of an industrial port in southern Tamaulipas, Mexico, were monitored seasonally over a lustrum, focusing on their fishes assemblage and water parameters. The purpose was to characterize these ecosystems that are affected by different disturbances of industrial origin, document changes, and assess potentially degrading terms as the affectations prevailed over the period of study. The wetlands are differentially affected by impacting land uses in their immediate surroundings, by crude oil leaks, and/or by diverse industrial wastewater discharges. Water parameters varied only slightly over time for most sites, and relative disparities among sites remained. The …

Evaluating/Assessing The Impacts Of Invasive Species Through Biofouling In Nigeria : Sustainable Marine Environmental Management In Profile, Jamila Idris Opadeyi

World Maritime University Dissertations

No abstract provided.

Concentration Of Heavy Metals In Three Distinct Algae Families From Humboldt County, California, Kodiak E. Miller, Caleb J. Strait, Jacob I. Begorre, Brittney L. Mitchell, Claire P. Till

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Anthropogenic impacts on marine environments can impact metal fluxes and concentrations available to marine species. Monitoring these impacts is necessary to better understand the interactions between the biotic and abiotic components of these ecosystems and mitigate the risk posed by harmful toxins introduced by human activities. Biomoniters, like macroscopic algae, are useful indicators that illuminate the bioaccumulation of toxins commonly introduced from anthropogenic activity. With this in mind, the concentrations of heavy metals zinc (Zn), nickel (Ni), and copper (Cu) were analyzed via the assessment of algae (Representatives from Ulva, Mastocarpus, Fucus) in two sites in Humboldt County: …

List Of Fish Species Present In Galápagos, Ecuador, And California, U.S.A., With Notes On Their Commercial Importance And Conservation Status, Erin J. Hanson, Jose R. Marin Jarrin

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

No abstract provided.

Variation In Coastal Macroinvertebrate Species Diversity On Intertidal Boulders In Trinidad, California., Louis Antonelli, Alexandra Winkler, Theron Taylor, Natalie Greenleaf

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Coastal environments of Humboldt County provide an optimal habitat for a diversity of macroinvertebrates. This study’s focus is to determine the differences in diversity of coastal macroinvertebrate (CM) species on intertidal boulders. Eleven CM species were visually counted within a one-square-meter quadrat along two height strata of five intertidal boulders. Based upon the Shannon-Wiener diversity index, diversity was measured between the CM species in the lower region (0-1 meter from base of boulder) and the upper region (1-2 meters from base of boulder). The resulting data showed the lower regions of the boulders had a higher average diversity rating, as …

Coral X-Radiograph Densitometry System, Nova Southeastern University

NSU Software

The Coral X-radiograph Densitometry System (CoralXDS) is a Windows-based program which provides a tool for measurement of linear extension, density, and calcification from coral X-radiographs. These quantities are determined for high-density, low-density, and annual bands. CoralXDS operates in two "modes": full mode and extension/luminance mode. Full mode measures linear extension, density, and calcification, while extension/luminance mode measures only linear extension. Extension/luminance mode requires only a coral image with scaling information. CoralXDS allows user specification of transect location and orientation on the coral image, and provides several options for automated and manual band selection. The output measurements …

Cpce Software, Nova Southeastern University

NSU Software

The CPCe (Coral Point Count with Excel extensions) program is a Windows-based software (PC use only) that provides a tool for the determination of coral cover using transect photographs. A specified number of spatially random points are distributed on a transect image and the features underlying the points are user-identified. Coverage statistics are then calculated and the results sent to Excel spreadsheets automatically.

Additionally, CPCe can be used for image calibration and area analysis of benthic features. Excel sheets are automatically generated to summarize the area calculations for each image.

Using CPCe

Using CPCe is simple and straightforward. The main …

Smart Drumlines Ineffective In Catching White Sharks In The High Energy Capes Region Of Western Australia: Acoustic Detections Confirm That Sharks Are Not Always Amenable To Capture, Stephen M. Taylor, Jason How, Michael J. Travers, Stephen J. Newman, Silas Mountford, Daniela Waltrick, Christopher E. Dowling, Ainslie M. Denham, Daniel J. Gaughan

Fisheries Research Articles

The management of human-shark interactions can benefit from the implementation of effective shark hazard mitigation measures. A Shark-Management-Alert-in-Real-Time (SMART) drumline trial in the Capes region of Western Australia was instigated after several serious incidents involving surfers and white sharks (Carcharodon carcharias). The project aimed to determine whether white sharks (target species), which were relocated after capture, remained offshore using satellite and acoustic tagging. Over a 27-month period, 352 fish were caught, 55% of which comprised tiger sharks (Galeocerdo cuvier). Ninety-one percent of animals were released alive in good condition. Only two white sharks were caught; both were relocated ≥ 1 …

Population Trajectory And Stressors Of Acropora Palmata Sites In The Florida Keys, Karen L. Neely, Kevin A. Macaulay, Kate S. Lunz

Marine & Environmental Sciences Faculty Articles

The decline of elkhorn coral, Acropora palmata, has been ongoing for decades, but the causes of decline and the resulting population status continue to be topics of study. Past efforts to categorize stressors have ranged from spatially and/or temporally focused efforts that detect local stressors but may miss broader patterns to meta-analyses that identify large-scale trends but may not account for finer-scale variability. We here conduct an analysis of sites surveyed across five years (2010-2015) and much of the Florida Reef Tract in order to look at large-scale patterns while also accounting for site, habitat, seasonal, and annual variability. …

Observations On Late Cretaceous Micrampulla (Corethrales, Bacillariophyceae) From The Campbell Plateau (Zealandia), Southwest Pacific Ocean, Kenta Abe, David M. Harwood, Richard W. Jordan

Department of Earth and Atmospheric Sciences: Faculty Publications

Late Cretaceous (late Campanian) diatom assemblages from the Campbell Plateau (Zealandia), southwest Pacific Ocean, obtained from Deep Sea Drilling Project (DSDP) Leg 29 Site 275, contain well-preserved specimens of two enigmatic diatom species currently assigned to the genus Ktenodiscus; Micrampulla parvula originally described from the Maastrichtian-age Moreno Shale, California, and Pterotheca cretacea from DSDP Site 275. In general, the two species share a number of common features with modern Corethron (domed valves, probable heterovalvate frustules, T-shaped serrated articulated spines, marginal sockets), but differ in the location of the sockets (i.e. vertically at the base of the valve dome and …

Keys To Genus Of Calanoid Copepods Of China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Calanoid Copepods Of China Seas, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

Calanoid copepods are a well-recognized taxonomic group of Crustacea. They were already placed, with one cyclopoid (Scribella) and five calanoid (Acartia, Calanus, Candacia, Euchirus (= Euchaeta), and Pontella) genera, under a single taxonomic unit, the Calanidae, by Dana [1]. Giesbrecht and Sars are the two early principal contributors to the taxonomy of Copepoda, including the Calanoida.

Based on the location of the body articulation, Giesbrecht [2] divided copepods into two groups, the Gymnopleoden and Podopleoden. All copepods, characterized by an articulation between the fifth pedigerous (leg-bearing) somite and genital somite, separating the body into an anterior part (prosome) and a …

Calanoid Copepods Of China Seas-Introduction And Acknowledgement, Chang-Tai Shih, Qing-Chao Chen, Yang-Chi Lan, Shih-Hui Hsiao, Chi-Yu Weng

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Spatial Variation In Hard Bottom Coral Communities Of The Coastal West Florida Shelf, Nicole Blank, Sandra D. Brooke, Brian K. Walker

Marine & Environmental Sciences Faculty Articles

Hard bottom coral and sponge communities differ along portions of the West Florida Shelf (WFS) in species occurrence, diversity, and/or size. However, the composition and spatial distribution of these communities are not well understood. Community transitions have been proposed in the central portion of the WFS around Tampa Bay, Cedar Key, and as far south as Charlotte Harbor, but supporting data are sparse. Fifteen sites in three regions of Florida were surveyed for species distribution, density, and demographics. Distinct communities were found between St Teresa, Hudson, and Tarpon Springs. Coral and sponge densities were highest off Tarpon Springs followed by …

Treatments Of Cyanobacteria On Mariculture Sponges In Jambiani, Tanzania, Sally Thornton-White

Independent Study Project (ISP) Collection

Since 2009, Marine Cultures, an NGO, has explored sponge farming in Jambiani to develop secure and sustainable livelihoods for the community. While sponge farming provides economic opportunity for an industry that functions within ecological boundaries, it faces unique issues that threaten its success. As climate change increases global water temperatures, cyanobacteria are causing increased death rates among mariculture sponges. Mitigating these negative effects with sustainable and reliable solutions can help Marine Cultures grow their positive impact. Alternative methods for mitigating cyanobacteria growth were tested during three study phases. Phase 1 tested how sponge health and algae growth responds to being …

[Tilapia (Oreochromis)] Neurocranium, Kaylee J. Czachorowski, Mackenzie S. Magyar, Haley Minne, David William Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium [Oreochromis] by Kaylee Czachorowski, Haley Minne, Mackenzie Magyar

Sediment Accumulation And Carbon Burial In Four Hadal Trench Systems, Kazumasa Oguri, Pere Masqué, Matthias Zabel, Heather A. Stewart, Gillian Mackinnon, Ashley A. Rowden, Peter Berg, Frank Wenzhöfer, Ronnie N. Glud

Research outputs 2022 to 2026

Hadal trenches are considered to act as depocenters for organic material, although pathways for the material transport and deposition rates are poorly constrained. Here we assess focusing, deposition and accumulation of material and organic carbon in four hadal trench systems underlying different surface ocean productivities; the eutrophic Atacama and Kuril-Kamchatka trenches, the mesotrophic Kermadec trench and the oligotrophic Mariana Trench. The study is based on the distributions of naturally occurring ²¹⁰Pb_ex, ¹³⁷Cs and total organic carbon from recovered sediment cores and by applying previously quantified benthic mineralization rates. Periods of steady deposition and discreet mass-wasting deposits were …

Trade-Offs Between Risks Of Predation And Starvation In Larvae Make The Shelf Break An Optimal Spawning Location For Atlantic Bluefin Tuna, Taylor A. Shropshire, Steven L. Morey, Eric P. Chassignet, Mandy Karnauskas, Victoria J. Coles, Estrella Malca, Raúl Laiz-Carrión, Øyvind Fiksen, Patricia Reglero, Akihiro Shiroza, José M. Quintanilla Hervas, Trika Gerard, John T. Lamkin, Michael R. Stukel

Faculty Publications

Atlantic bluefin tuna (ABT) (Thunnus thynnus) travel long distances to spawn in oligotrophic regions of the Gulf of Mexico (GoM) which suggests these regions offer some unique benefit to offspring survival. To better understand how larval survival varies within the GoM a spatially explicit, Lagrangian, individual-based model was developed that simulates dispersal and mortality of ABT early life stages within realistic predator and prey fields during the spawning periods from 1993 to 2012. The model estimates that starvation is the largest cumulative source of mortality associated with an early critical period. However, elevated predation on older larvae is …

Isolation And Characterization Of Fluorescent Proteins And Small Molecules From Marine Vertebrates, Sara Rose Krivoshik

Dissertations, Theses, and Capstone Projects

Fluorescence is a phenomenon in which a wavelength of light excites a fluorophore and then emits light at a higher, longer wavelength. This occurs throughout the biological world, in both the terrestrial and marine realms. Encompassing a diverse set of mechanisms from small molecules to large protein complexes; fluorescence has been used as a biological tool with a wide range of applications to study molecular and cellular biology for decades. This dissertation looks to identify and characterize novel fluorescent proteins and small molecules to allow for more efficient translation in developing new biotechnologies. Using a combination of RNA-Seq, Mass-Spec, protein …

Irrigation Decisions In Response To Groundwater Salinity In Kansas, Juhee Lee, Nathan P. Hendricks

School of Earth, Environmental, & Marine Sciences Faculty Publications

Understanding the interaction between groundwater salinity and irrigation decision making has important implications for groundwater management. Econometrics models were estimated using observed farmer behavior in response to different groundwater salinity levels in a region of Kansas. Estimation results demonstrate that farmers in the face of groundwater salinity change their irrigation decisions on irrigated acreage (i.e., extensive margin), crop choice (i.e., indirect intensive margin), and water application depth (i.e., direct intensive margin). The empirical results indicate an overall decrease in water use due to higher salinity, primarily through a decrease at the extensive margin.