Ecology and Evolutionary Biology Commons^™

The Expansion Of Shrimp Farms In The Gulf Of California And Potential For Restoration To Support Migratory Waterbirds, Miles Scheuering

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Wintering and stopover areas provide crucial habitat for migratory birds yet are often understudied. The estuaries of Sonora and Sinaloa on the Gulf of California in Mexico provide critical wintering and stopover sites for migratory waterbirds in the Pacific Flyway. Shrimp farms are the greatest threat to these areas and their full impact is not well understood but they provide poor habitat for waterbirds. A significant portion of existing farms may be abandoned based on a disparity between active area reported by the Sonora and Sinaloa state commissions and observed area based on remote sensing. Abandoned farms represent potential area …

Effects Of Harvest Regulations And Post-Release Hooking Mortality On Walleye Populations In South Dakota, Cade Lyon

Electronic Theses and Dissertations

Harvest regulations are commonly implemented to manipulate fisheries stocks. By regulating the size and number of fish that are harvested by anglers, managers are able to meet the goals and needs of regions. However, these management actions come with the potential for negative consequences. Overexploitation due to less restrictive harvest regulations can cause collapses in fisheries populations. In addition, indirect consequences such as hooking mortality brought on by length-based regulations can also be detrimental to populations. In this study, I investigated the effects of various harvest regulations on Walleye populations in three western South Dakota irrigation reservoirs: Angostura, Belle Fourche, …

Evaluating Avian Occupancy On Sites Treated With Nrcs Conservation Practices Implemented To Benefit Cerulean (Setophaga Cerulea) And Golden-Winged Warblers (Vermivora Chrysoptera) In West Virginia, Lincoln R. Oliver

Graduate Theses, Dissertations, and Problem Reports (ETD)

The USDA - Natural Resources Conservation Service (NRCS) supports private lands conservation across the United States to benefit imperiled focal wildlife species using conservation practices to restore habitat. Through the Cerulean Warbler (Setophaga cerulea) Forestland Enhancement Project (CWAFEP) and the Working Lands for Wildlife (WLFW) Golden-winged Warbler (Vermivora chrysoptera) initiative, the NRCS provides technical and financial assistance to private landowners to implement conservation practices that follow science-based habitat management guidelines. Few research studies have evaluated focal species-specific occupancy on CWAFEP and/or WLFW sites, and research is required to inform each conservation project’s effectiveness in an adaptive …

Association Between Asymptomatic Malaria Infection And Pregnancy Outcome In Delta State, Nigeria, Sadiatu Sally Obi

Walden Dissertations and Doctoral Studies

Pregnant women are vulnerable due to the pregnancy-induced suppressed immunity in malaria-endemic areas. Asymptomatic malaria in pregnancy (MiP) threatens both the mother, fetus, and neonate via chronic placental malaria which impacts maternal-neonatal exchange. Some studies reported that MiP risk factors vary across locations, however, there are few studies on MiP and pregnancy outcome in Nigeria. The purpose of this study was to investigate the association between asymptomatic placental malaria infection and pregnancy outcome among parturients in Asaba, Delta State, Nigeria. This study was developed with a quantitative methodology that utilized primary and secondary healthcare data from 483 subjects aged 18–49 …

Initial And Advanced Stages Of Microbiota Establishment Within The Tsetse Fly, Miguel Eduardo Medina Munoz

Graduate Theses, Dissertations, and Problem Reports (ETD)

Symbiosis is a long-term physical association between two or more species, although little is known regarding its evolutionary origins, particularly at the genetic level. Tsetse flies are the vector of African trypanosomes, causative agents of Human and Animal African Trypanosomiases. Tsetse provide an ideal model for studying initial and advanced stages of symbiosis. Tsetse have a simple digestive tract microbiota primarily consisting of two bacteria; the ancient mutualist Wigglesworthia glossinidia and the recently acquired Sodalis glossinidius. This work presents a chronological study in evolutionary terms of the history of a microbial-insect association. First, I present concepts on symbiosis and …

Tree Species Influence On Microbial Functional Gene Abundance And N Cycling In Riparian Soil, Elizabeth Matejczyk

Graduate Theses, Dissertations, and Problem Reports (ETD)

Little is known about how above-ground vegetation may differentially influence the below-ground microbial community structure, abundance, and function. Abundance of soil microbial N cycling genes responsible for nitrification (amoA), denitrification (nirK and nirS), and nitrous oxide reduction (nosZ) may vary with tree species and increasing N availability, and these variables may be used to predict production of NO₃^- and N₂O from soil. Variability of nitrification and denitrification rates have also been linked to tree mycorrhizal associations, with soil beneath tree species associated with arbuscular mycorrhizal (AM) exhibiting greater denitrification rates …

The Reconstruction Of Hatchery Creek: Effects On Macroinvertebrate And Fish Community Dynamics, Patrick Vrablik

Murray State Theses and Dissertations

Hatchery Creek is a restored stream in Jamestown, KY that drains Wolf Creek National Fish Hatchery. The previous degraded channel of Hatchery Creek caused large sediment plumes in the Lower Cumberland River and was restored to decrease sediment loss and provide the opportunity for a self-sustaining trout population. I predicted that the increased amount of habitat would increase taxa richness, abundance and biomass of macroinvertebrates. Macroinvertebrates were monitored in three periods; the degraded period, a one-year recovery period, and a restored period using surber and kicknet samples in order to determine biomass, abundance, diversity, taxa richness, and macroinvertebrate biotic index. …

Response Of Forest Birds To Spotted Wing Drosophila (Drosophila Suzukii Matsumura), A Novel Invasive Fruit Pest, At Allegheny National Forest, Daniel P. Roche

Graduate Theses, Dissertations, and Problem Reports (ETD)

Non-native invasive insect pests can have dramatic impacts on native ecosystems, feeding on plant foliage, wood, or sap. Little is known, however, about how fruit-targeting NNIIPs may affect native ecosystems. Spotted wing Drosophila (Drosophila suzukii Matsumura, SWD) is a recently introduced invasive vinegar fly that parasitizes the fruits of many plant species in the United States. While its activity in agricultural systems is well-documented, little is known about its activity in forest ecosystems, despite growing evidence of its presence and parasitism of fruits there. Parasitism could reduce fruit attractiveness for vertebrate fruit consumers, including migratory birds. As such, this …

Resilience: Insights From The U.S. Longterm Ecological Research Network, Jane Cowles, Laura Templeton, John J. Battles, Peter J. Edmunds, Robert C. Carpenter, Stephen R. Carpenter, Michael Paul Nelson, Natalie L. Cleavitt, Timothy J. Fahey, Peter M. Groffman, Joe H. Sullivan, Maile C. Neel, Gretchen J. A. Hansen, Sarah Hobbie, Sally J. Holbrook, Clare E. Kazanski, Eric W. Seabloom, Russell J. Schmitt, Emily H. Stanley, Alan J. Tepley, Natalie S. Van Doorn, Jake M. Vander Zanden

Advanced Science Research Center

Ecosystems are changing in complex and unpredictable ways, and analysis of these changes is facilitated by coordinated, long-term research. Meeting diverse societal needs requires an understanding of what populations and communities will be dominant in 20, 50, and 100 yr. This paper is a product of a synthesis effort of the U.S. National Science Foundation funded Long-Term Ecological Research (LTER) network addressing the LTER core research area of populations and communities. This analysis revealed that each LTER site had at least one compelling story about what their site would look like in 50 or 100 yr. As the stories were …

The Evolution Of Technology, Kelly Cooper

Williams Honors College, Honors Research Projects

As per outlined by Dr. Quinn, this literature review will be a comprehensive review paper including an overview of current and previous research done in the field of Memetics. This will further include sifting through literature to hone in on a specific, new area of memetics Dr. Weeks is focused on, the evolutionary change of abiotic factors through purchasing. This is to be completed with the help of the library worshops designed to teach the skills necessary to undergo a literature review of this size. I will also participate in weekly reading groups to discuss papers and work closely with …

Multi-Level Movement Response Of Invasive Wild Pigs (Sus Scrofa) To Removal, Guillaume Bastille-Rousseau, Peter E. Schlichting, David A. Keiter, Joshua B. Smith, John C. Kilgo, George Wittemyer, Kurt C. Vercauteren, James C. Beasley, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Lethal removal of invasive species, such as wild pigs (Sus scrofa), is often the most efficient approach for reducing their negative impacts. Wild pigs are one of the most widespread and destructive invasive mammals in the USA. Lethal management techniques are a key approach for wild pigs and can alter wild pig spatial behavior, but it is unclear how wild pigs respond to the most common removal technique, trapping.We investigated the spatial behavior of wild pigs following intensive removal of conspecifics via trapping at three sites within the Savannah River Site, SC, USA. We evaluated changes in …

Evaluating The Effects Of Mountain Beaver (Aplodontia Rufa) Management On Conifer Stocking In Western Oregon, Jimmy D. Taylor, Vanessa M. Petro

United States Department of Agriculture Wildlife Services: Staff Publications

Mountain beaver (Aplodontia rufa) is the most primitive rodent species in North America and is endemic to the Pacific Northwest, USA. Within their range, mountain beaver cause more conflict with conifer forest regeneration than any other vertebrate species. Most damage occurs as a result of clipping and browsing new seedlings, which reduces stocking density and delays stand development. An integrated approach using trapping and a registered toxicant (baiting) has been suggested as the most efficacious means to reduce seedling loss during stand initiation. We evaluated this management strategy in intensively managed conifer stands across two mountain ranges in …

Principal Economic Effects Of Cormorant Predation On Catfish Farms, Carole R. Engle, Terrel W. Christie, Brian S. Dorr, Ganesh Kumar, Luke A. Roy, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Substantial economic losses of farmed catfish to fish-eating birds such as the double-crested cormorant, Phalacrocorax auritus, continue to be reported on U.S. catfish farms. An economic analysis was conducted of the on-farm effects of both the increased expenditures to scare fish-eating birds from catfish farms and of the value of the catfish that were consumed by cormorants. A survey was conducted of U.S. catfish farmers in the Delta region of Mississippi and Arkansas, to obtain farm-level data on expenditures to scare birds. Estimations of the lost revenue from catfish consumed by cormorants were developed from a concurrent study on …

Variation In Angiostrongylus Cantonensis Infection In Definitive And Intermediate Hosts In Hawaii, A Global Hotspot Of Rat Lungworm Disease, Chris Niebuhr, Shane R. Siers, Israel Leinbach, Lisa M. Kaluna, Susan I. Jarvi

United States Department of Agriculture Wildlife Services: Staff Publications

Angiostrongylus cantonensis (rat lungworm) is a tropical and subtropical parasitic nematode, with infections in humans causing angiostrongyliasis (rat lungworm disease), characterized by eosinophilic meningitis. Hawaii has been identified as a global hotspot of infection, with recent reports of high infection rates in humans, as well as rat definitive and snail intermediate hosts. This study investigated variation in A. cantonensis infection, both prevalence and intensity, in wild populations of two species of rats (Rattus exulans and R. rattus) and one species of snail (Parmarion martensi). An overall infection prevalence of 86.2% was observed in P. martensi and …

Peptide Elisa And Fret-Qpcr Identified A Significantly Higher Prevalence Of Chlamydia Suis In Domestic Pigs Than In Feral Swine From The State Of Alabama, Usa, Md Monirul Hoque, Folasade Adekanmbi, Subarna Barua, Kh. Shamsur Rahman, Virginia Aida, Brian Anderson, Anil Poudel, Anwar Kalalah, Sara Bolds, Steven Madere, Steven Kitchens, Stuart Price, Vienna Brown, B. Graeme Lockaby, Constantinos S. Kyriakis, Bernhard Kaltenboeck, Chengming Wang

United States Department of Agriculture Wildlife Services: Staff Publications

Chlamydia suis is an important, highly prevalent, and diverse obligate intracellular pathogen infecting pigs. In order to investigate the prevalence and diversity of C. suis in the U.S., 276 whole blood samples from feral swine were collected as well as 109 fecal swabs and 60 whole blood samples from domestic pigs. C. suis-specific peptide ELISA identified anti-C. suis antibodies in 13.0% of the blood of feral swine (26/276) and 80.0% of the domestic pigs (48/60). FRET-qPCR and DNA sequencing found C. suis DNA in 99.1% of the fecal swabs (108/109) and 21.7% of the whole blood (13/60) of …

Behavioral State Resource Selection In Invasive Wild Pigs In The Southeastern United States, Lindsay M. Clontz, Kim M. Pepin, Kurt C. Vercauteren, James C. Beasley

United States Department of Agriculture Wildlife Services: Staff Publications

Elucidating correlations between wild pig (Sus scrofa) behavior and landscape attributes can aid in the advancement of management strategies for controlling populations. Using GPS data from 49 wild pigs in the southeastern U.S., we used hidden Markov models to define movement path characteristics and assign behaviors (e.g., resting, foraging, travelling). We then explored the connection between these behaviors and resource selection for both sexes between two distinct seasons based on forage availability (i.e., low forage, high forage). Females demonstrated a crepuscular activity pattern in the high-forage season and a variable pattern in the low-forage season, while males exhibited nocturnal activity …

Efficacy And Risks From A Modified Sodium Nitrite Toxic Bait For Wild Pigs, Nathan P. Snow, Jason Wishart, Justin A. Foster, Linton D. Staples, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

BACKGROUND: Wild pigs (Sus scrofa) are a destructive invasive species throughout many regions of the world. In 2018, a field evaluation of an early prototype of a sodium nitrite (SN) toxic bait in the United States revealed wild pigs dropped large amounts of the toxic bait outside the pig-specific bait stations while feeding, and thus subsequent hazards for non-target animals. We modified the SN-toxic bait formulation, the design of the bait station, and the baiting strategy to reduce dropped bait. We tested the modifications in Queensland, Australia (December 2018), Alabama, USA (August 2019), and Texas, USA (March 2020) …

Effects Of Social Structure And Management On Risk Of Disease Establishment In Wild Pigs, Anni Yang, Peter E. Schlichting, Bethany Wight, Wesley M. Anderson, Sarah M. Chinn, Mark Q. Wilber, Ryan S. Miller, James C. Beasley, Raoul Boughton, Kurt C. Vercauteren, George Wittemyer, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. Contact heterogeneity among hosts determines invasion and spreading dynamics of infectious disease, thus its characterization is essential for identifying effective disease control strategies. Yet, little is known about the factors shaping contact networks in many wildlife species and how wildlife management actions might affect contact networks.

2. Wild pigs in North America are an invasive, socially structured species that pose a health concern for domestic swine given their ability to transmit numerous devastating diseases such as African swine fever (ASF). Using proximity loggers and GPS data from 48 wild pigs in Florida and South Carolina, USA, we employed a …

Distribution And Abundance Of Scaup Using Baitfish And Sportfish Farms In Eastern Arkansas, Stephen A. Clements, Brian S. Dorr, Brian Davis, Luke A. Roy, Carole R. Engle, Katie C. Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Arkansas' bait- and sportfish facilities are commonly used by various piscivorous bird species, including lesser scaup (Aythya affinis) and greater scaup (A. marila) that consume substantial quantities of fish. To mediate this predation, farmers implement extensive bird harassment programs that create additional costs to fish loss, thus research investigating the distribution and abundance of scaup is needed to help farmers allocate their bird harassment efforts more efficiently. In winters 2016–2017 and 2017–2018 we conducted 1,368 pond surveys to investigate pond use by scaup on farms during birds' regular wintering period (i.e., November–March). We used intrinsic and …

Avian Influenza A Viruses Reassort And Diversify Differently In Mallards And Mammals, Ketaki Ganti, Anish Bagga, Juliana Dasilva, Samuel S. Shepard, John R. Barnes, Susan A. Shriner, Katia Koelle, Anice C. Lowen

United States Department of Agriculture Wildlife Services: Staff Publications

Reassortment among co-infecting influenza A viruses (IAVs) is an important source of viral diversity and can facilitate expansion into novel host species. Indeed, reassortment played a key role in the evolution of the last three pandemic IAVs. Observed patterns of reassortment within a coinfected host are likely to be shaped by several factors, including viral load, the extent of viral mixing within the host and the stringency of selection. These factors in turn are expected to vary among the diverse host species that IAV infects. To investigate host differences in IAV reassortment, here we examined reassortment of two distinct avian …

The Consequences Of Predators Without Prey, Mitchell A. Parsons, Thomas M. Newsome, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Rapid and ongoing environmental change is leading to scenarios where marine and terrestrial predators are persisting without prey, either by scavenging or using anthropogenic foods. Despite investigations into the effects of predator presence or absence on prey behavior and ecology, little research has assessed the effect of prey absence on predators. Here, we synthesize research on scavenging and the use of anthropogenic resources by marine and terrestrial predators; hypothesize how the use of these resources may change predator behavior with respect to their social structure, space use, life history, and individual behavioral traits; and illustrate how these changes are likely …

Improving Evaluation Of Nonlethal Tools For Carnivore Management And Conservation: Evaluating Fladry To Protect An Endangered Species From A Generalist Mesocarnivore, R. M. Windell, L. L. Bailey, J. K. Young, T. M. Livieri, D. A. Eads, S. W. Breck

United States Department of Agriculture Wildlife Services: Staff Publications

Carnivore conservation and management are global research priorities focused on reversing population declines of imperiled species and identifying more effective and humane management of generalist carnivores with thriving populations. Nonlethal methods to mitigate conflict are increasingly used to advance conservation objectives; however, there is limited knowledge about the effectiveness of many nonlethal methods. We tested a nonlethal tool (fladry), that serves as a barrier to deter wolves Canis lupus and coyotes Canis latrans, for its efficacy at preventing coyotes from using prairie dog Cynomys ludovicianus colonies, the primary prey for critically endangered black-footed ferrets Mustela nigripes. We used …

Social Media As A Window Into Human-Wildlife Interactions And Zoonotic Disease Risk: An Examination Of Wild Pig Hunting Videos On Youtube, Hailey E. Mclean, Lauren M. Jaebker, Aaron M. Anderson, Tara L. Teel, Alan D. Bright, Stephanie A. Shwiff, Keith M. Carlisle

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) damage agriculture and the environment, as well as transmit diseases to animals and people. Hunters are particularly vulnerable to zoonotic disease risks when harvesting wild pigs. Management agencies have endeavored to inform the public about disease risks associated with wild pigs and best practices for mitigating such risks. However, the extent that this guidance has reached hunters and influenced their practices is unclear. We approached this topic through an analysis of wild pig hunting videos on YouTube. We found evidence of relatively few behaviors and communications regarding disease risks and best practices for personal …

Relative Acceptance Of Brodifacoum Pellets And Soft Bait Sachets By Polynesian Rats (Rattus Exulans) On Wake Atoll, Peter J. Kappes, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

Removing invasive rats from island ecosystems using rodenticides has proven conservation benefits and is an important management tool for conserving and restoring island ecosystems. However, rodenticide-based eradications can fail if not all rats consume enough bait to result in lethal toxicosis. A recent post-operational review of a failed attempt to eradicate rats from Wake Atoll suggested that some individuals may not have ingested a lethal dose of rodenticide due to potential dietary and/or sensory preferences developed via regular access to anthropogenic food sources. These food sources may be higher in fats and oils, possessing different sensory properties (e.g., softer, chewier, …

Welfare Performance Of Three Foothold Traps For Capturing North American River Otters Lontra Canadensis, Matthew J. Lovallo, H. B. White, J. D. Erb, M. S. Peek, Thomas J. Deliberto

United States Department of Agriculture Wildlife Services: Staff Publications

Foothold traps are effective tools for the live capture and restraint of wildlife for management and research. Successful river otter Lontra canadensis restoration programs throughout North America used them extensively. Restoration programs used a variety of methods and models of foothold traps, but comprehensive efforts to describe and quantify injuries associated with river otter captures have been limited. We evaluated injuries of river otters caught in three commercially available models of foothold traps including the number 11 double long-spring with standard jaws, the number 11 double long-spring with double jaws, and the number 2 coil-spring trap. Based on examinations of …

Scaup Depredation On Arkansas Baitfish And Sportfish Aquaculture, Stephen A. Clements, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie C. Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Lesser scaup (Aythya affinis) and greater scaup (A. marila), hereafter scaup, consume a variety of aquatic invertebrates, plants, and occasionally small fish. Scaup have foraged on commercial aquaculture farms in the southern United States for decades. However, the types, abundance, and rate of fish exploitation by scaup on baitfish and sportfish farms are not well documented. Thus, information is needed to understand how fish and other foods influence scaup use of aquatic resources, and any potential economic effects of depredation of fish. From November–March in winters 2016–2017 and 2017–2018, we conducted 1,458 pond surveys to estimate …

Impact Of Covid-19 On The Us And Texas Economy: A General Equilibrium Approach, Lirong Liu, Steven S. Shwiff, Stephanie A. Shwiff, Maryfrances Miller

United States Department of Agriculture Wildlife Services: Staff Publications

This paper examines the impact of COVID-19 on the US and Texas economy using a computable general equilibrium model, REMI PI+. We consider three scenarios based on economic forecasts from various sources, including the University of Michigan’s RSQE (Research Seminar in Quantitative Economics), IMF, and the Wi orld Bank. We report a GDP loss of $106 million (a 6% decline) with 1.2 million jobs lost (6.6%) in Texas in 2020. At the national level, GDP loss is $996 billion (a 5% decline) with 11.5 million jobs lost (5.5%) in the same year. By 2026, the aggregate total GDP loss in …

Conflict, Coexistence, Or Both? Cougar Habitat Selection, Prey Composition, And Mortality In A Multiple-Use Landscape, David C. Stoner, Mark A. Ditmer, Dustin L. Mitchell, Julie K. Young, Michael L. Wolfe

United States Department of Agriculture Wildlife Services: Staff Publications

Western North America is experiencing remarkable human population growth and land-use change. Irrigation and associated cultivation have led to colonization of urban-wildland interface (UWI) environments by mule deer (Odocoileus hemionus), and consequently, cougars (Puma concolor). In the wake of these changes, human-wildlife conflicts have increased in tandem with questions about long-term species conservation. To address these concerns, we fit 79 cougars with radio-telemetry collars in the Oquirrh Mountains near Salt Lake City, Utah (2002–2010). Our goal was to evaluate variation in cougar habitat selection, diet, and cause-specific mortality in a landscape dominated by urban, military, and industrial activities. We used …

Crop Salinity Tolerance Induction Using Novel Biostimulants (Saltibio), Elomofe Ikuyinminu

Theses

Salinity is one of the major abiotic stresses affecting crop production, especially in arid and semi-arid areas. Most of the vegetable crops are salt sensitive, growing inadequately in salinised soils due to the accumulation of toxic ions from prolonged, inadequate irrigation programs. A meaningful approach to counteract salinity stress and increase crop yield is the use of protein hydrolysate biostimulants (PHBs). The main objectives of this study were to generate legume-derived PHBs by enzymatic hydrolysis, evaluate their ability to induce salinity stress tolerance in plants, and understand their mode of action. A full compositional and structural analysis of the generated …

Characterization Of A Scalloped Hammerhead (Sphyrna Lewini) Nursery Habitat In Portions Of The Atlantic Intracoastal Waterway, Bryanna N. Wargat

UNF Graduate Theses and Dissertations

The scalloped hammerhead shark (Sphyrna lewini) worldwide population has been in sharp decline, and they are currently listed as a globally critically endangered species by the IUCN. This warrants a need to identify and protect critical habitats for the species, such as nurseries, which promote stable populations. A section of the Tolomato River, in northeastern Florida, has shown to host large and consistent numbers of young of year scalloped hammerhead sharks. This gave cause to determine whether this portion of the Atlantic Intracoastal Waterway (ICW) serves as a nursery habitat for the species and to understand how the …