Ecology and Evolutionary Biology Commons^™

Observations On Regeneration Of The Pedipalp And Legs Of Scorpions, Martin Watz, Jason A. Dunlop

Euscorpius

An Opisthacanthus asper (Peters, 1861) (Hormuridae) shows a relatively rare example of pedipalp regeneration in which the lost tibia and tarsus was replaced by a smaller, curved element of uncertain homology to either the fixed or free finger. A comparable abnormal palp described in the literature hints that pedipalps can only regenerate a structure of this form, regardless of the site of amputation. An Olivierus caucasicus (Nordmann, 1840) (Buthidae) is described in which claws (pretarsus) of leg III regenerated directly at the distal end of the tibia, while in leg IV the claws regenerated at the end of a truncated …

Identifying Conifer Tree Vs. Deciduous Shrub And Tree Regeneration Trajectories In A Space-For-Time Boreal Peatland Fire Chronosequence Using Multispectral Lidar, Humaira Enayetullah, Laura Chasmer, Christopher Hopkinson, Dan Thompson, Danielle Cobbaert

Aspen Bibliography

Wildland fires and anthropogenic disturbances can cause changes in vegetation species composition and structure in boreal peatlands. These could potentially alter regeneration trajectories following severe fire or through cumulative impacts of climate-mediated drying, fire, and/or anthropogenic disturbance. We used lidar-derived point cloud metrics, and site-specific locational attributes to assess trajectories of post-disturbance vegetation regeneration in boreal peatlands south of Fort McMurray, Alberta, Canada using a space-for-time-chronosequence. The objectives were to (a) develop methods to identify conifer trees vs. deciduous shrubs and trees using multi-spectral lidar data, (b) quantify the proportional coverage of shrubs and trees to determine environmental conditions driving …

Investigating The Effects Of Climate Change On The Phenology Of Achillea Millefolium, Aquilegia Coerulea, And Penstemon Cyanocaulis, Hannah O’Toole, Kailey Hicks, Lisa Long, Jackson Garske, Anna Sher

DU Undergraduate Research Journal Archive

As the effects of climate change are starting to unearth themselves, the impacts can be observed by tracking the patterns of cyclical natural phenomena also known as phenology, and monitoring how they have changed over time. These cycles are at the crux of making ecosystems viable for their local biodiversity, and understanding the ongoing change allows for further understanding of the ecosystem’s change over time. In this study, we look at the ordinal flowering dates of the Achillea millefolium, Aquilegia coerulea, and Penstemon cyanocaulis over the past century. Our data give insight into how warmer temperatures occurring earlier in …

Natural History Of The Guatemalan Copper Iophanus Pyrrhias (Godman And Salvin, 1887) (Lepidoptera: Lycaenidae) In Guatemala, José Monzón-Sierra, Gregory C. Ballmer

The Taxonomic Report of the International Lepidoptera Survey

Abstract

Detailed information including photographs about the natural history of Iophanus pyrrhias (Godman and Salvin 1887) in Guatemala is presented. Information includes geographic and altitudinal distribution and phenology. We reconfirm the immatures stages use Muehlenbeckia tamnifolia (Kunth) Meisn., 1841 (Polygonaceae) as the host plant.

Reusmen

Se presenta información detallada incluyendo fotografías de la historia natural de Iophanus pyrrhias (Godman y Salvin 1887) en Guatemala. La información incluye distribución geográfica y altitudinal y fenología. Confirmamos que los estados inmaduros se alimentan de Muehlenbeckia tamnifolia (Kunth) Meisn., 1841 (Polygonaceae).

Evolutionary Analyses Of Visual Opsin Genes In Frogs And Toads: Diversity, Duplication, And Positive Selection, Ryan K. Schott, Leah Perez, Matthew Kwiatkowski, Vance Imhoff, Jennifer M. Gumm

Faculty Publications

Among major vertebrate groups, anurans (frogs and toads) are understudied with regard to their visual systems, and little is known about variation among species that differ in ecology. We sampled North American anurans representing diverse evolutionary and life histories that likely possess visual systems adapted to meet different ecological needs. Using standard molecular techniques, visual opsin genes, which encode the protein component of visual pigments, were obtained from anuran retinas. Additionally, we extracted the visual opsins from publicly available genome and transcriptome assemblies, further increasing the phylogenetic and ecological diversity of our dataset to 33 species in total. We found …

Conservation, Restoration, And Monitoring Plan For The Lower White River, Utah, Casey A. Pennock, William W. Macfarlane, Phaedra Budy, Justin Jimenez, Jerrad Goodell

Ecology Center Publications

In this report we present a conservation, restoration and monitoring plan for the lower White River, a major tributary of the Green River. The plan is intended to help guide conservation, restoration and management of the lower White River over the next several decades and is also developed as an adaptive management plan to facilitate learning. The recommended conservation and restoration actions are intended to maintain and enhance native riparian vegetation and instream habitat for native desert fishes including federally endangered Colorado Pikeminnow (Ptychocheilus lucius), federally endangered Razorback Sucker (Xyrauchen texanus), Speckled Dace (Rhinichthys osculus …

Aging Precision Using Sectioned Pectoral Fin Rays From Silver Carp Hypophthalmichthys Molitrix, Timothy Spier, Jessica Morris, Josh Tompkins

Faculty & Staff Research and Creative Activity

Many structures are used to age Silver Carp Hypophthalmichthys molitrix, but no consensus had been obtained concerning which structure is best. Previous studies have used sections from the pectoral spine, but some of those studies have used transmitted light to illuminate the annuli of the sectioned pectoral spine. We used reflected light to enhance the contrast of annuli in sectioned pectoral spines and compared the aging precision obtained from this method among 6 readers who varied in their aging experience. Overall precision as measure by the mean coefficient of variation (CV) was 5.23 ± 0.76SE, which compares well with …

Chapter 018 - Caves, Janice M. Glime

Bryophyte Ecology Volume 4: Habitat and Role

Explore the contents of Bryophyte Ecology, Volume 4, Chapter 18 - Caves by clicking the links above. For the Contents section of this ebook, as well as Volumes 1 through 5, please visit the Bryophyte Ecology Main Page.

Use CTRL+F to easily search within PDF files.

Ebook sponsored by Michigan Technological University and the International Association of Bryologists.

Invasive Plants Watch List: 2022, Allison Zach

Nebraska Invasive Species Program

The purpose of the weed watch list is to collect data on the distribution of invasive plants found in various Nebraska counties. Counties were divided up into ‘ecoregions’ based on the Nebraska Game & Parks Commission’s Legacy Plan (map of regions below). The plants in the watch list have been identified based on their invasiveness in surrounding states and their increasing range in Nebraska. Data collected on watch list plant species distribution has been used to support the listing or delisting of noxious weeds. Plant species in the weed watch list are categorized based on early detection and rapid response …

Maud Gordon Holmes Arboretum List Of Tree Species, Chloe Mokadam

Maud Gordon Holmes Arboretum List of Tree Species

A database of tree species that links to descriptions/profiles for over 90 tree species.

The database is also available here: Maud Gordon Holmes Arboretum

Using Occupancy Modeling For Protocol Development And Habitat Assessment Of Necturus Maculosus In A Large Nagivational River, Alyssa Rachelle Jones

Theses, Dissertations and Capstones

Determining the survey effort required to reliably detect population change can be challenging for cryptic, elusive species. The secretive nature of amphibians makes it difficult to monitor population status and gather information about their natural history, including habitat use, which is essential for amphibian monitoring programs. The goals of this study were to examine if detection probabilities were affected by bait (i.e., light and food), breeding activity, and environmental covariates in a population of fully aquatic salamanders, Necturus maculosus. I evaluated the effectiveness of three bait treatments (light bait, food bait, combined light and food bait) and an unbaited …

Ephemeroptera Culturing Methods: An Analysis On Rearing And Toxcity Testing On Sensitive Early Life Stages Of Native Mayfly Taxa, Geneve Rainette Edwards

Theses, Dissertations and Capstones

Standard toxicity testing organisms are utilized for regulatory purposes and often ecological risk assessments. Ephemeroptera taxa have been reported to be more sensitive to aquatic contaminants than the standard toxicity testing organisms currently used in determining effects on aquatic ecosystems. Establishing methods for culturing native Ephemeroptera taxa will provide a more sensitive test organism to determine the toxicity of contaminants and will be more representative of the responses of native taxa. Additionally, it will provide a test organism at the most sensitive life stages. The objective of this research is to develop methods for culturing and testing of native Ephemeroptera …

Hydroponic Lab Growing Guide Bell Peppers, Zachary N. Russell

Hydroponic Center

This is a guide for growing Bell Peppers in the Hydroponic Lab. It states how the plant was grown from propagation, which system the plant was grown in, the plants optimal conditions (PPM, pH), and time frame until fully grown.

Microplastic Abundances In The Guana River Estuary In Northeast Florida, Mckenna Keplinger

Honors Undergraduate Theses

Plastic never fully disappears, but instead breaks into smaller pieces referred to as microplastics (< 5 mm length). Microplastics are common worldwide, and more studies are needed to understand the accumulation and diversity of microplastics found in various environments. In this study, six locations were sampled for one year in the Guana River Estuary, a partially impounded system with heavily urbanized headwaters. This study was conducted in conjunction with the Guana Tolomato Matanzas National Estuarine Research Reserve (GTM NERR) and the Florida Fish and Wildlife Conservation Commission (FWC) at their water sampling stations. The objectives of this study were to investigate: 1) distribution patterns across sample sites over time, 2) the color, size, and shape of microplastics found, and 3) polymer composition. Water samples were collected from surface waters in 1-L bottles, with five replicates at each site. Sampling occurred once a month, at the beginning of each month from August 2020-August 2021. Samples were analyzed for abundance and characteristics of microplastics using a dissecting microscope and the polymer composition was determined using Fourier-transform infrared spectroscopy. No pattern was found in the distribution of microplastics from north to south or over time. Variations in plastic color, size, and polymer composition suggests that there are multiple sources of pollution into the Guana River Estuary.

Thermal Tolerances Of The Invasive Macrophyte Hydrilla Verticillata, Joshua Williams

Graduate Research Showcase

Invasive species often rapidly spread due to their ability to adapt to a wide range of habitats they can occupy and lack of competition. Hydrilla verticillata is an invasive aquatic macrophyte that has spread across the United States due to human activities. Like many aquatic plants, Hydrilla has the ability to reproduce through fragmentation of the mother plant. In this method, Hydrilla fragments are then dispersed by water current to other areas where they can settle and grow. To date, little is known about the abiotic conditions that may restrict the spread of invasive Hydrilla. However, compared to other macrophytes …

Responses Of Arthropods To Fire And How Pollinators And Pollination Services Are Affected By Fire Severity, Blyssalyn V. Bieber

Electronic Theses and Dissertations

Fires impact ecosystems globally and due to climate change, there are shifts in fire regimes that impact ecological communities which provide essential ecosystem services. Focusing on arthropods, fire can influence this ubiquitous animal group in various way. We performed a comprehensive meta-analysis evaluating how fires impact differing arthropod functional groups. We found that overall, fire negatively effects community level responses for most functional groups with herbivores as the only exception showing some positive effects of fire. We also studied mixed-severity fires that burned >20 years ago and compared floral visitor communities across fire severities. We implemented a pollinator exclusion experiment …

Environmental Gradients Impact Key Leaf Traits In Riparian Trees, Amanda Malone

Electronic Theses and Dissertations

Specific leaf area (SLA) reflects a plant’s carbon investment per area and relates to generalized leaf economics spectrum growth strategies (LES). To fill gaps of knowledge about intraspecific SLA variation and why it is often inconsistent with the LES, we studied the response of two riparian tree species along the urban-rural gradient in Northeastern Colorado: an invasive, nitrogen-fixer with broad tolerances and a nitrogen-limited and shade-intolerant native. Despite these differences, the two species responded similarly, apart from the response to the urban-rural gradient, in which lower nitrogen in rural areas was associated with a more conservative strategy in the native …

Stormwater Capture Via Green Infrastructure In The Plaster Creek Watershed, Naomi Dykstra, Noah Millen, Ethan Tulp, Josian Aardema, Deanna Geelhoed, David Warners

Summer Research

Calvin University’s campus is located within the Plaster Creek watershed, an area of land from Caledonia to the Grand River, near downtown Grand Rapids. After many years of neglect and mistreatment, it has become one of the most polluted waterways in West Michigan. Plaster Creek Stewards (PCS) aims to improve the local watershed by focusing on education, research and restoration projects. These projects help through reduction of stormwater runoff containing high amounts of sediment and other pollutants through the use of green infrastructure.

Refugia Gardening: A Good Anthropocene Begins At Home, Robin Kollar, David S. Koetje

Summer Research

Our present age is often called the Anthropocene, an era dominated by human activities that erode biodiversity and ecological functions, altering natural systems and cycles. As a result, we are causing climate and mass extinction crises and undermining the ecosystem services that enable human flourishing. Thus, humans have moral and existential obligations to reverse this trend by realigning our relationships with nature. We are advocating for refugia gardening to build places of renewal in our own yards and in our communities. Refugia are pockets of life where species can survive and adapt during ecological crises. Refugia become “seeds” for repopulating …

The Emma Cole Project: Reevaluating The Flora Of Grand Rapids, William Hofmann, Hayden Janssen, Martin Vanderschoot, David Warners

Summer Research

In 1901, botanist and teacher Emma Cole published an account of all the vascular plants in the Grand Rapids area, which is the most comprehensive documentation of the flora in the area today. The vicinity of Grand Rapids has been developed significantly since then, and with it the surrounding natural spaces have also been greatly altered. Over the past 7 years, Calvin University’s Emma Cole Project has been inventorying the flora of greater Grand Rapids and comparing modern plant life with the flora during Cole’s time 120 years ago. This project strives to both verify species’ presence around Grand Rapids …

Translocation Of Timber Rattlesnakes At Two West Virginia State Forests, Elizabeth Morgan Johnson

Theses, Dissertations and Capstones

In wildlife management, translocation is defined as the purposeful movement of an individual(s) from one place to another with a wildlife management goal. Translocation has become a common tool for mitigating negative human-wildlife interactions. We conducted a translocation study on timber rattlesnakes (Crotalus horridus) in response to numerous human-rattlesnake encounters with the goal of developing a translocation protocol that would allow natural resources personnel to mitigate negative encounters between the public and rattlesnakes and reduce impacts to local timber rattlesnake populations. In this study, we scaled translocation distance to site-specific home range characteristics to assess whether translocation outcomes …

Morphological Variation And Community Science In Orthoptera, Amy Byerly

Electronic Theses and Dissertations

Patterns of morphological divergence across species’ ranges provide insight into local adaptation and speciation. Here, we compare phenotypic divergence among 4,221 crickets from 337 populations of two related species of field cricket, Gryllus firmus and G. pennsylvanicus and their hybrids. We find that these species differ across their geographic range in key morphological traits, such as body size and ovipositor length, and we directly compare phenotype with genotype for a subset of crickets demonstrating nuclear genetic introgression, phenotypic intermediacy of hybrids, and essentially unidirectional mitochondrial introgression. We discuss how these morphological traits relate to life history differences between the species. …

Pain Sentience Criteria And Their Grading, Eva Jablonka, Simona Ginsburg

Animal Sentience

On the basis of the target article by Crump and colleagues, we suggest a more parsimonious scheme for evaluating the evidence for sentience. Since some of the criteria used by Crump et al. are not independent and some are uninformative we exclude some criteria and amalgamate others. We propose that evidence of flexible learning and prioritization, in conjunction with relevant data on brain organization, is sufficient for assigning pain-sentience to an animal and we suggest a scoring scheme based on four criteria.

Truly Minimal Criteria For Animal Sentience, Mark Solms

Animal Sentience

The criteria for determining animal sentience proposed in the target article are sensible but they lack an explicit functional justification for the focus on pain. This commentary provides an abbreviated account of the most basic functional principles that underpin animal sentience and articulates some minimal criteria for determining its presence.

Crustacean Pain, Michael Tye

Animal Sentience

This commentary discusses the target article’s methodology, the relevance of the claim that crustaceans lack a neocortex to the thesis that they feel pain, and the evaluation of the results of some trade-off experiments done with hermit crabs.

No Need For Certainty In Animal Sentience, Yew Kwang Ng

Animal Sentience

This commentary supports Crump et al.’s (2022) point that where risks to welfare are severe, strong evidence of sentience is sufficient to warrant protecting welfare. Crump et al.’s eight criteria for sentience are also useful. Flexible decision-making (5) and flexible behaviour (6) are consistent with Ng (1995). The concession that the “no-need-for-sentience” proposition is unnecessary also strengthens the importance of the target article’s conclusions.

What Might Decapod Sentience Mean For Policy, Practice, And Public?, Richard Gorman

Animal Sentience

Crump et al. provide eight criteria for evaluating sentience in decapods, with scope for for application to other taxa. Their work has attracted the interest of policymakers. This commentary discusses the limitations of conceptual and legal acknowledgement of sentience in chainging practice and public attitudes. More work is needed. Social science may be able to help.

Generalizing Frameworks For Sentience Beyond Natural Species, Michael Levin

Animal Sentience

Crump et al. (2022) offer a well-argued example of an essential development: a rigorous framework for assessing sentience from the perspective of moral concern over an agent’s welfare. Current and forthcoming developments in bioengineering, synthetic morphology, artificial intelligence, biorobotics, and exobiology necessitate an expansion and generalization of this effort. Verbal reports (the Turing Test) and homology to human brains are utterly inadequate criteria for assessing the status of novel, unconventional agents that offer no familiar touchstone of phylogeny or anatomy. We must develop principled approaches to evaluating the sentience of (and thus, our responsibility to) beings of unfamiliar provenance and …

Sentience In Decapods: An Open Question, Mark Briffa

Animal Sentience

Crump et al.’s framework is a powerful tool designed to assist decisions on the ethical treatment of decapod crustaceans. However, the question of whether decapods are sentient (i.e., whether they feel), remains open, perhaps indefinitely. More optimistically, we might design experiments that distinguish among different levels of awareness, sometimes viewed as components of sentience. We should strike a balance between assuming that all organisms are sentient and making unnecessary anatomical assumptions about sentience. Refining current experiments may provide concrete insights about awareness in Decapoda and other taxa.

Does The Sentience Framework Imply All Animals Are Sentient?, Kristin Andrews

Animal Sentience

The eight criteria proposed in Crump et al.’s framework for evaluating pain sentience in decapod crustaceans are just the tip of the iceberg when it comes to markers that could increase confidence in an animal’s sentience more generally. Some of the commentaries have already pointed out that pain is only one kind of sentience (Souza Valente). It has also already been pointed out that there are other criteria for pain that could be usefully added to the framework’s eight (Burrell). This expansive thinking about criteria that can be used to increase confidence in sentience raisess the question: in an expansive …