Population Biology Commons^™

Prevalence Of Rats And Rodent Borne Pathogens Across Post-Katrina New Orleans, Bruno Marco Ghersi

Doctoral Dissertations

Disasters are happening at an increasingly higher rate and intensity a trend that is expected to continue as more humans migrate to coastal urban areas. Disasters, and as importantly, disaster recovery can affect how native and pest populations will recover. My aim was to improve understanding of disease risk by evaluating the socioecological conditions that have shaped commensal rat recovery and distribution, as well as the pathogens they carry, across New Orleans after Hurricane Katrina. I first estimated relative abundance and distribution of commensal rats from rodent trapping conducted between mid-2014 and early-2017 across 96 sites in 10 areas of …

Root Stage Distributions And Their Importance In Plant-Soil Feedback Models, Tyler Poppenwimer

Doctoral Dissertations

Roots are fundamental to PSFs, being a key mediator of these feedbacks by interacting with and affecting the soil environment and soil microbial communities. However, most PSF models aggregate roots into a homogeneous component or only implicitly simulate roots via functions. Roots are not homogeneous and root traits (nutrient and water uptake, turnover rate, respiration rate, mycorrhizal colonization, etc.) vary with age, branch order, and diameter. Trait differences among a plant’s roots lead to variation in root function and roots can be disaggregated according to their function. The impact on plant growth and resource cycling of changes in the distribution …

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …

Fall Field Report, August-November 2020, W. Ross Silcock

Nebraska Bird Review

Two issues were of concern this fall, and both appeared to have consequences or at least similarities in Nebraska. A major die-off in New Mexico made national news: https://www.aba.org/the-data-behind-mysterious-bird-deaths-in-new-mexico/. On Sep 9, 2020, the temperature dropped from 96°F to 40°F in the Albuquerque area, a record low, winds reached 70 mph, and several inches of snow fell, killing large numbers of birds directly. Over the next few days, hundreds more dead birds were picked up. Some have linked this high mortality to birds displaced from the mountains due to fire and unfortunately being caught in the severe weather. While fire …

Index To Volume 88

Nebraska Bird Review

Index to The Nebraska Bird Review, Volume 88 (2020)

From: Aden, Scott 95

to: Zonotrichia leucophrys gambelii 158 leucophrys 70, 158 oriantha 70

History Of The Seward-Branched Oak Lake Christmas Bird Count, 1993-2020, Joseph A. Gubanyi

Nebraska Bird Review

The Seward-Branched Oak Lake Christmas Bird Count (Seward-BOL CBC) began in 1993 and has been conducted every year since then except for 2010 for a total of 27 counts. Weather conditions prevented the count on the selected date in 2010 and a backup date could not be set up. The count was started for several reasons. The area west of Lincoln has a diversity of habitats including all or part of four public lakes (Branched Oak, Pawnee, Twin Lakes, and Meadowlark) as well as a diversity of terrestrial habitats on both public and private land. The circle is close to …

The Nebraska Bird Review, Volume 88 December 2020 Number 4

Nebraska Bird Review

Fall Field Report, August - November 2020, by W. Ross Silcock …13.8

History of the Seward - Branched Oak Christmas Bird Count, 1993-2020, by Joseph Gubanyi …162

Index to Volume 88 … 173

Subscription and Organization Information …187

Assessment Of Genetic Diversity In Largetooth Sawfish, Pristis Pristis, Populations Over The 20th Century, Ann Fearing

Master's Theses

The Critically Endangered Largetooth Sawfish, Pristis pristis, experienced global declines in range and abundance over the past century and Australia is now their last stronghold. This research aimed to understand whether these declines have been accompanied by a reduction in levels of genetic diversity. Using P. pristis tissue samples sourced from natural history specimens, three fragments (616-bp, 386-bp, 141-bp) in the mitochondrial DNA (mtDNA) control region were PCR-amplified. At each fragment, significant genetic structure was found in P. pristis overall (Φ_ST=0.946, N=9; 0.813, N=54; 0.771, N=99). The Indo-West Pacific and Atlantic/Eastern Pacific each harbor genetically distinct lineages of …

Spatial Use By Mammals Within Two State Parks In The Ozarks National Scenic Riverways, Benjamin Aaron Smith

MSU Graduate Theses

A mammalian species inventory with comparisons between sampled sites was conducted via multiple methodologies to document presence of mammals at two Missouri state parks within the Ozark National Scenic Riverways. Camera traps, small mammal traps, acoustic detectors, and mist nets were used to detect species at the parks, and species similarity indices and occupancy analyses were used to discern use of space. A mammalian inventory was compiled for each area of inquiry. Greater diversity was found at the park with more variable habitat types. Bat activity was more in the park with a known hibernaculum, though species specific activity differed …

Fish And Macroinvertebrate Response To Restoration And Conservation Efforts, Madison C. Cogar

MSU Graduate Theses

Fish and macroinvertebrate response to restoration and conservation efforts varies in regards to the size and structure of the system (e.g. headwater streams in WV versus large rivers such as the Mississippi River). This project reviews fish and macroinvertebrate rebound in treated acid mine drainage (AMD) streams in WV as well as macroinvertebrate drift patterns in the Mississippi and Missouri Rivers. AMD is a product of a chemical reaction resulting in an acidic water outflow from mining sites, which may harm aquatic life. As a response, passive AMD treatment systems have been installed. I tested the effectiveness of remediation by …

An Examination Of The Influence Of Multi-Scale Processes And Connectivity On The Population And Assemblage Dynamics Of Headwater Fishes, Josh P. Hubbell

Dissertations

Typified by their branching pattern, headwaters are numerically abundant as the density of these habitats increases with increasing distance from the base of a dendritic river system. Connectivity among headwaters is complex, resulting in the spatial isolation of populations. Headwater specialists have evolved a suite of traits that permit these species to permanently reside within these habitats. The spatial configuration and connectivity of headwaters has repercussions for metapopulations and meta-assemblages. I investigated how multi-scale processes and connectivity influenced the patch occupancy, coexistence, movement ecology, population structure, and gene flow of headwater specialists. In chapter two, I used occupancy modeling to …

Hunting Contests In New York State, Tyler Caffrey

Honors College Theses

The world is currently in a biodiversity crisis and hunting contests cannot continue. Hunting contests are not legitimate wildlife management tools, but exist for entertainment and killing for a prize. Many of the species targeted can be killed without bag limits. Additionally, many wildlife management practices are retroactive, meaning they are in response to an issue. Within New York State, these contests are not regulated by the NYSDEC beyond adhering to hunting regulations. With these factors together, animals targeted by these contests can be hunted to a detrimental point, and then management agencies would step in. These contests face significant …

Defining Bee Pollinator Community Composition In Tennessee Soybean, Andrew L. Lawson

Masters Theses

Two planting dates of various soybean varieties were planted in Jackson and Knoxville, TN during 2018 and 2019 with the overall intent of surveying the diversity bee (Hymenoptera) genera in these agroecosystems and also to assess the potential for using late maturing soybean as a food resource for bees during the dearth of floral resources that often occurs during the fall. We also investigated how manipulating planting dates and soybean variety selection affected the occurrence of insect pests that occurred in the soybean.

Both active (netting) and passive (bee bowls and blue-vane traps) sampling were used to collect the bees, …

Linking Mosquito Surveillance To Dengue Fever Through Bayesian Mechanistic Modeling, Clinton B. Leach, Jennifer A. Hoeting, Kim M. Pepin, Alvaro E. Eiras, Mevin B. Hooten, Colleen T. Webb

USDA Wildlife Services: Staff Publications

Our ability to effectively prevent the transmission of the dengue virus through targeted control of its vector, Aedes aegypti, depends critically on our understanding of the link between mosquito abundance and human disease risk. Mosquito and clinical surveillance data are widely collected, but linking them requires a modeling framework that accounts for the complex non-linear mechanisms involved in transmission. Most critical are the bottleneck in transmission imposed by mosquito lifespan relative to the virus’ extrinsic incubation period, and the dynamics of human immunity. We developed a differential equation model of dengue transmission and embedded it in a Bayesian hierarchical …

The Effect Of Fcgammariia Polymorphisms On Dengue Outbreak Severity, Leah Darwin, Richard V. Clarke

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Phage-Antibiotic Synergy Inhibited By Temperate And Chronic Virus Competition, Sara M. Clifton, Kylie Landa, Lauren Mossman, Rachel J. Whitaker, Zoi Rapti

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Can Modeling Save Florida’S Native Bromeliads From The Evil Weevil?, Erin N. Bodine, Zoe S. Brookover, Brian D. Christman, Sydney L. Davis, Alexis Kohnke

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

The Impacts Of Fishing And Stochasticity On Saving Coral Reefs, Robyn Blevins, Jordan Penn, Christopher Stieha

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Genomic Evidence Suggests Further Changes Of Butterfly Names, Jing Zhang, Qian Cong, Jinhui Shen, Pal A. Opler, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Further genomic sequencing of butterflies by our research group expanding the coverage of species and specimens from different localities, coupled with genome-scale phylogenetic analysis and complemented by phenotypic considerations, suggests a number of changes to the names of butterflies, mostly those recorded from the United States and Canada. Here, we present evidence to support these changes. The changes are intended to make butterfly classification more internally consistent at the genus, subgenus and species levels. That is, considering all available evidence, we attempt to assign similar taxonomic ranks to the clades of comparable genetic differentiation, which on average is correlated with …

Investigating The Population Dynamics Of An Avian Apex Predator Across An Urban Gradient, Donna Marain

FIU Electronic Theses and Dissertations

Predators are often the focus of conservation efforts. They can be useful sentinel species, umbrella species, and flagship species. Predators can also be the first guild lost when ecosystems are under stress, especially from anthropogenic land-use change. Avian predators (raptors) can be an exception to this trend, filling the role of apex predators across the urban gradient. South Florida contains the Everglades ecosystem and one of the fastest growing human populations in the country. In the current study, I investigated the population dynamics of South Florida’s most abundant hawk: the Red-shouldered Hawk (Buteo lineatus, RSHA) across the urban …