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Using Deep Learning For Children Brain Image Analysis, Rafael Toche Pizano 2021 University of Arkansas, Fayetteville

Using Deep Learning For Children Brain Image Analysis, Rafael Toche Pizano

Computer Science and Computer Engineering Undergraduate Honors Theses

Analyzing the correlation between brain volumetric/morphometry features and cognition/behavior in children is important in the field of pediatrics as identifying such relationships can help identify children who may be at risk for illnesses. Understanding these relationships can not only help identify children who may be at risk of illnesses, but it can also help evaluate strategies that promote brain development in children. Currently, one way to do this is to use traditional statistical methods such as a correlation analysis, but such an approach does not make it easy to generalize and predict how brain volumetric/morphometry will impact cognition/behavior. One of …


A Comparison Of Word Embedding Techniques For Similarity Analysis, Tyler Gerth 2021 University of Arkansas, Fayetteville

A Comparison Of Word Embedding Techniques For Similarity Analysis, Tyler Gerth

Computer Science and Computer Engineering Undergraduate Honors Theses

There have been a multitude of word embedding techniques developed that allow a computer to process natural language and compare the relationships between different words programmatically. In this paper, similarity analysis, or the testing of words for synonymic relations, is used to compare several of these techniques to see which performs the best. The techniques being compared all utilize the method of creating word vectors, reducing words down into a single vector of numerical values that denote how the word relates to other words that appear around it. In order to get a holistic comparison, multiple analyses were made, with …


Improving Bayesian Graph Convolutional Networks Using Markov Chain Monte Carlo Graph Sampling, Aneesh Komanduri 2021 University of Arkansas, Fayetteville

Improving Bayesian Graph Convolutional Networks Using Markov Chain Monte Carlo Graph Sampling, Aneesh Komanduri

Computer Science and Computer Engineering Undergraduate Honors Theses

In the modern age of social media and networks, graph representations of real-world phenomena have become incredibly crucial. Often, we are interested in understanding how entities in a graph are interconnected. Graph Neural Networks (GNNs) have proven to be a very useful tool in a variety of graph learning tasks including node classification, link prediction, and edge classification. However, in most of these tasks, the graph data we are working with may be noisy and may contain spurious edges. That is, there is a lot of uncertainty associated with the underlying graph structure. Recent approaches to modeling uncertainty have been …


Trunctrimmer: A First Step Towards Automating Standard Bioinformatic Analysis, Z. Gunner Lawless, Dana Dittoe, Dale R. Thompson, Steven C. Ricke 2021 University of Arkansas, Fayetteville

Trunctrimmer: A First Step Towards Automating Standard Bioinformatic Analysis, Z. Gunner Lawless, Dana Dittoe, Dale R. Thompson, Steven C. Ricke

Computer Science and Computer Engineering Undergraduate Honors Theses

Bioinformatic analysis is a time-consuming process for labs performing research on various microbiomes. Researchers use tools like Qiime2 to help standardize the bioinformatic analysis methods, but even large, extensible platforms like Qiime2 have drawbacks due to the attention required by researchers. In this project, we propose to automate additional standard lab bioinformatic procedures by eliminating the existing manual process of determining the trim and truncate locations for paired end 2 sequences. We introduce a new Qiime2 plugin called TruncTrimmer to automate the process that usually requires the researcher to make a decision on where to trim and truncate manually after …


Using Large Pre-Trained Language Models To Track Emotions Of Cancer Patients On Twitter, Will Baker 2021 University of Arkansas, Fayetteville

Using Large Pre-Trained Language Models To Track Emotions Of Cancer Patients On Twitter, Will Baker

Computer Science and Computer Engineering Undergraduate Honors Theses

Twitter is a microblogging website where any user can publicly release a message, called a tweet, expressing their feelings about current events or their own lives. This candid, unfiltered feedback is valuable in the spaces of healthcare and public health communications, where it may be difficult for cancer patients to divulge personal information to healthcare teams, and randomly selected patients may decline participation in surveys about their experiences. In this thesis, BERTweet, a state-of-the-art natural language processing (NLP) model, was used to predict sentiment and emotion labels for cancer-related tweets collected in 2019 and 2020. In longitudinal plots, trends in …


The Effect Of Initial Conditions On The Weather Research And Forecasting Model, Aaron D. Baker 2021 Stephen F Austin State University

The Effect Of Initial Conditions On The Weather Research And Forecasting Model, Aaron D. Baker

Electronic Theses and Dissertations

Modeling our atmosphere and determining forecasts using numerical methods has been a challenge since the early 20th Century. Most models use a complex dynamical system of equations that prove difficult to solve by hand as they are chaotic by nature. When computer systems became more widely adopted and available, approximating the solution of these equations, numerically, became easier as computational power increased. This advancement in computing has caused numerous weather models to be created and implemented across the world. However a challenge of approximating these solutions accurately still exists as each model have varying set of equations and variables to …


A Framework To Detect The Susceptibility Of Employees To Social Engineering Attacks, Hashim H. Alneami 2021 Embry-Riddle Aeronautical University

A Framework To Detect The Susceptibility Of Employees To Social Engineering Attacks, Hashim H. Alneami

Doctoral Dissertations and Master's Theses

Social engineering attacks (SE-attacks) in enterprises are hastily growing and are becoming increasingly sophisticated. Generally, SE-attacks involve the psychological manipulation of employees into revealing confidential and valuable company data to cybercriminals. The ramifications could bring devastating financial and irreparable reputation loss to the companies. Because SE-attacks involve a human element, preventing these attacks can be tricky and challenging and has become a topic of interest for many researchers and security experts. While methods exist for detecting SE-attacks, our literature review of existing methods identified many crucial factors such as the national cultural, organizational, and personality traits of employees that enable …


Achieving Differential Privacy And Fairness In Machine Learning, Depeng Xu 2021 University of Arkansas, Fayetteville

Achieving Differential Privacy And Fairness In Machine Learning, Depeng Xu

Graduate Theses and Dissertations

Machine learning algorithms are used to make decisions in various applications, such as recruiting, lending and policing. These algorithms rely on large amounts of sensitive individual information to work properly. Hence, there are sociological concerns about machine learning algorithms on matters like privacy and fairness. Currently, many studies only focus on protecting individual privacy or ensuring fairness of algorithms separately without taking consideration of their connection. However, there are new challenges arising in privacy preserving and fairness-aware machine learning. On one hand, there is fairness within the private model, i.e., how to meet both privacy and fairness requirements simultaneously in …


Prediction, Recommendation And Group Analytics Models In The Domain Of Mashup Services And Cyber-Argumentation Platform, Md Mahfuzer Rahman 2021 University of Arkansas, Fayetteville

Prediction, Recommendation And Group Analytics Models In The Domain Of Mashup Services And Cyber-Argumentation Platform, Md Mahfuzer Rahman

Graduate Theses and Dissertations

Mashup application development is becoming a widespread software development practice due to its appeal for a shorter application development period. Application developers usually use web APIs from different sources to create a new streamlined service and provide various features to end-users. This kind of practice saves time, ensures reliability, accuracy, and security in the developed applications. Mashup application developers integrate these available APIs into their applications. Still, they have to go through thousands of available web APIs and chose only a few appropriate ones for their application. Recommending relevant web APIs might help application developers in this situation. However, very …


Corn Co-Product Logistics: An Application Of Linear Programming, Dmitry Kalashnikov Adams 2021 University of Nebraska-Lincoln

Corn Co-Product Logistics: An Application Of Linear Programming, Dmitry Kalashnikov Adams

Department of Agricultural Economics: Dissertations, Theses, and Student Research

The purpose of this thesis is not to explore new ways to apply or to study the general field of linear programming. Rather the emphasis is on applying a particular type of linear programming to a specific problem. In this thesis the classic case of linear programing - the transportation problem – is used to optimize corn co-product logistics between six ethanol producing facilities. At the core, the problem of corn germ logistics lies in transporting products from areas of excess supply to areas with excess demand. The challenge of optimizing corn germ logistics lies in managing transportation between producing …


Image Analysis Of Charged Bimodal Colloidal Systems In Microgravity., Adam J. Cecil 2021 University of Louisville

Image Analysis Of Charged Bimodal Colloidal Systems In Microgravity., Adam J. Cecil

Electronic Theses and Dissertations

Colloids are suspensions of two or more phases and have been topics of research for advanced, tunable materials for decades. Stabilization of colloids is typically attributed to thermodynamic mechanisms; however, recent studies have identified transport or entropic mechanisms that can potentially stabilize a thermodynamically unstable colloidal system. In this study, suspensions of silsesquioxane microparticles and zirconia nanoparticles were dispersed in a nitric acid solution and allowed to aggregate for 8-12 days in microgravity aboard the International Space Station. The suspensions were subsequently imaged periodically at 2.5x magnification. Due to the inadequacy of existing image analysis programs, the python package “Colloidspy” …


Incorporating Demographic Structure And Variable Interaction Types Into Community Assembly Models, Akhil Reddy Alasandagutti, Nayan Chawla 2021 University of Mississippi

Incorporating Demographic Structure And Variable Interaction Types Into Community Assembly Models, Akhil Reddy Alasandagutti, Nayan Chawla

Honors Theses

Theoretical studies of ecological food webs have allowed ecologists to remove the constraints of specific location and timescales from their study of ecological communities; food webs are generally complex and thus empirical study is difficult. Further, this theoretical approach allows ecologists to compare ecological processes and outcomes across any possible food web structures. However, these simulated communities are only as useful as the model from which they were constructed. Modifying existing considerations in these models, and generating new ones, are the jobs of theoretical ecologists that seek to achieve the shared goal of a majority of simulations: representation of real …


Tripdecoder: Study Travel Time Attributes And Route Preferences Of Metro Systems From Smart Card Data, Xiancai TIAN, Baihua ZHENG, Yazhe WANG, Hsao-Ting HUANG, Chih-Cheng HUNG 2021 Singapore Management University

Tripdecoder: Study Travel Time Attributes And Route Preferences Of Metro Systems From Smart Card Data, Xiancai Tian, Baihua Zheng, Yazhe Wang, Hsao-Ting Huang, Chih-Cheng Hung

Research Collection School Of Computing and Information Systems

In this paper, we target at recovering the exact routes taken by commuters inside a metro system that are not captured by an Automated Fare Collection (AFC) system and hence remain unknown. We strategically propose two inference tasks to handle the recovering, one to infer the travel time of each travel link that contributes to the total duration of any trip inside a metro network and the other to infer the route preferences based on historical trip records and the travel time of each travel link inferred in the previous inference task. As these two inference tasks have interrelationship, most …


Robot: Robustness-Oriented Testing For Deep Learning Systems, Jingyi WANG, Jialuo CHEN, Youcheng SUN, Xingjun MA, Dongxia WANG, Jun SUN, Peng CHENG 2021 Zhejiang University

Robot: Robustness-Oriented Testing For Deep Learning Systems, Jingyi Wang, Jialuo Chen, Youcheng Sun, Xingjun Ma, Dongxia Wang, Jun Sun, Peng Cheng

Research Collection School Of Computing and Information Systems

Recently, there has been a significant growth of interest in applying software engineering techniques for the quality assurance of deep learning (DL) systems. One popular direction is deep learning testing, where adversarial examples (a.k.a. bugs) of DL systems are found either by fuzzing or guided search with the help of certain testing metrics. However, recent studies have revealed that the commonly used neuron coverage metrics by existing DL testing approaches are not correlated to model robustness. It is also not an effective measurement on the confidence of the model robustness after testing. In this work, we address this gap by …


Snore: An Intuitive Algorithm For Accurately Simulating N-Body Orbits, Connor L. Nance 2021 Murray State University

Snore: An Intuitive Algorithm For Accurately Simulating N-Body Orbits, Connor L. Nance

Honors College Theses

We present SnOrE (Simple n-body Orbital Engine), a Python package which aims to simulate n-body orbital systems while simultaneously overcoming early educational barriers of computational astrodynamics for undergraduate physics students. SnOrE exploits rudimentary syntax and commonly-understood Python libraries to accurately simulate orbits of systems, given initial position and momentum conditions of each body in the system. As the n-body problem is as of yet unsolvable theoretically for n ≥ 3, having a numerical perspective on complicated orbits is of great importance to potentially understanding the processes of star and planet formation. Especially significant examples of this research …


Characterizing Students’ Engineering Design Strategies Using Energy3d, Jasmine Singh, Viranga Perera, Alejandra Magana, Brittany Newell 2021 Purdue University

Characterizing Students’ Engineering Design Strategies Using Energy3d, Jasmine Singh, Viranga Perera, Alejandra Magana, Brittany Newell

Discovery Undergraduate Interdisciplinary Research Internship

The goals of this study are to characterize design actions that students performed when solving a design challenge, and to create a machine learning model to help future students make better engineering design choices. We analyze data from an introductory engineering course where students used Energy3D, an open source computer-aided design software, to design a zero-energy home (i.e. a home that consumes no net energy over a period of a year). Student design actions within the software were recorded into text files. Using a sample of over 300 students, we first identify patterns in the data to assess how students …


Mesoscopic Traffic Simulation Model And Calibration Considering Stretching-Segment Design, Zhaocheng He, Xuanhua Lin, Peilin Nie, Ronghui Zhang 2021 1. Research Center of Intelligent Transport System, Sun Yat-Sen University, Guangzhou 510006, China; ;2. Guangdong Provincial Key Laboratory of Intelligent Transport System, Guangzhou 510006, China; ;

Mesoscopic Traffic Simulation Model And Calibration Considering Stretching-Segment Design, Zhaocheng He, Xuanhua Lin, Peilin Nie, Ronghui Zhang

Journal of System Simulation

Abstract: In order to make the simulation model fit the characteristics of urban traffic, both high accuracy and high performance, a lightweight mesoscopic traffic simulation system and the process of calibration are established. The speed-density model and vertical queue model are equivalent to the vehicle movement processes, the simulation accuracy and calibration efficiency are improved by the stretching-segment design at urban intersections of vertical queuing model, and the real individual vehicle information is used as the calibration data source. The application of the model in Xuancheng urban road network shows that, compared with the vertical queuing model, it can …


Modeling And Simulation Of Electric Vehicle Industry Development Based On System Dynamics, Yueqiang Fu, Tiantian Xia 2021 The Center of Collaboration and Innovation, Jiangxi University of Technology, Nanchang 330098, China;

Modeling And Simulation Of Electric Vehicle Industry Development Based On System Dynamics, Yueqiang Fu, Tiantian Xia

Journal of System Simulation

Abstract: New energy electric vehicle are the main trend of automobile industry upgrading. It plays an important role in ensuring the energy security and improving the ecological environment. It is of theoretical and practical significance to carry out research on the development of new energy electric vehicles. The affecting factors are systematically analyzed, the causal relationship model and stock flow model are established, and the dynamic equation of the model are determined and the parameter assignments are made. The model is verified and the system simulation and analysis are performed. The development trend and main influencing factors of …


Small Fault Detection Based On Cumulative Sum Of Neighbor Statistic, Xiaoping Guo, Jiajun Gao, Jianbin Guo, Li Yuan 2021 Information Engineering School, Shenyang University of Chemical Technology, Shenyang 110142, China;

Small Fault Detection Based On Cumulative Sum Of Neighbor Statistic, Xiaoping Guo, Jiajun Gao, Jianbin Guo, Li Yuan

Journal of System Simulation

Abstract: Aiming at the small faults and the common data non-linear problems of industrial process, a fault detection method based oncumulative sum of neighbor statistic (CUSUM-NS) is proposed. Mutual information principal component analysis (MIPCA) is used to reduce the dimension of training data, and the principal components based on mutual information are extracted to construct a new sample space. For the new sample space after dimensionality reduction, the nonlinear features of the process data can be fully extracted through the distance square sum statistics of k nearest neighbors. Cumulative summation(CUSUM) method is used to accumulate the sum of squares of …


Visual Simulation Platform For Visible Light Reconnaissance Load Of Unmanned Aerial Vehicle, Yuzhou Chen, Li Yuan, Qinglin Wang, Zhang Qing, Jinyuan Zhang 2021 1. Beijing Institute of Technology, School of Automation, Beijing 100081, China; ;

Visual Simulation Platform For Visible Light Reconnaissance Load Of Unmanned Aerial Vehicle, Yuzhou Chen, Li Yuan, Qinglin Wang, Zhang Qing, Jinyuan Zhang

Journal of System Simulation

Abstract: In view of the simulation and evaluation requirement of the visual system parameters on the performance of video imaging during the operation and reconnaissance of unmanned aerial vehicle, a visual simulation platform for the reconnaissance load is designed and constructed. The collected video is processed according to the visual system parameters and the flight parameters, and the support for the evaluation and the index design of the unmanned aerial vehicle reconnaissance load system is provided, and the guidance is provided for the flight parameters and the flight track setting when the unmanned aerial vehicle reconnaissance and operation …


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