Applied Mathematics Commons^™

Optimal Control Frameworks For A Class Of Epidemiological And Oncological Models, Asma Ali H Alghamdi

Mathematics Dissertations - Archive

In this thesis, we employ optimal control frameworks in two distinct contexts: Human immunodeficiency virus (HIV) and esophageal cancer. For HIV, we introduce a comprehensive data-driven nonlinear optimization framework designed for personalized therapies. This framework utilizes a deterministic in-host nonlinear ordinary differential equation (ODE) model and formulates two optimization problems using individual patient data. The first problem focuses on estimating patient-specific parameters through constrained optimization, while the second problem determines optimal combination therapies to reduce viral load to undetectable levels. Several numerical experiments suggest that our framework can provide a robust and effective optimal dosages with lower toxicity levels to …

Orthogonal Single-View And Multi-View Feature Selection Models Via Spectral Theory Based Methods, Zachary Chairez

Mathematics Dissertations - Archive

As the digital world continues to grow in the age of big data, there beckons a need for efficient and robust methods for data exploration. Under the umbrella of machine learning, feature selection positions itself as a fruitful approach that uncovers buried truths and illuminates important features of data, all while minimizing long-term storage requirements. In this work, we introduce a set of novel single-view and multi-view supervised feature selection models which are embedded with orthogonality constraints to maintain data's structural integrity while confining the optimal solution's search space.

Taking advantage of the underlying framework of these types of models, …

A Recursive Framework For Evaluating Moments Using Zero-Suppressed Binary Decision Diagrams, Brian Godwin Lim, Renzo Roel P. Tan, Jun Kawahara, Shin Ichi Minato, Kazushi Ikeda

Quantitative Methods and Information Technology Faculty Publications

The zero-suppressed binary decision diagram (ZDD) is a compact data structure widely used for the efficient representation of families of sparse subsets. Its inherent recursive structure also facilitates easy diagram manipulation and family operations. Practical applications generally fall under discrete optimization, such as combinatorial problems and graph theory. Given its utility, summarizing the subsets represented in the diagram using key metrics is of great value as this provides valuable insights into the characteristics of the family. The paper proposes a recursive algorithm to extract information on moments from families represented as a ZDD. Given a value for every element in …

Automatic Hemorrhage Segmentation In Brain Ct Scans Using Curriculum-Based Semi-Supervised Learning, Solayman H. Emon, Tzu-Liang (Bill) Tseng, Michael Pokojovy, Peter Mccaffrey, Scott Moen, Md Fashiar Rahman

Mathematics & Statistics Faculty Publications

One of the major neuropathological consequences of traumatic brain injury (TBI) is intracranial hemorrhage (ICH), which requires swift diagnosis to avert perilous outcomes. We present a new automatic hemorrhage segmentation technique via curriculum-based semi-supervised learning. It employs a pre-trained lightweight encoder-decoder framework (MobileNetV2) on labeled and unlabeled data. The model integrates consistency regularization for improved generalization, offering steady predictions from original and augmented versions of unlabeled data. The training procedure employs curriculum learning to progressively train the model at diverse complexity levels. We utilize the PhysioNet dataset to train and evaluate the proposed approach. The performance results surpass those of …

Addressing Spectral Bias Of Deep Neural Networks By Multi-Grade Deep Learning, Ronglong Fang, Yuesheng Xu

Mathematics & Statistics Faculty Publications

Deep neural networks (DNNs) have showcased their remarkable precision in approximating smooth functions. However, they suffer from the spectral bias, wherein DNNs typically exhibit a tendency to prioritize the learning of lower-frequency components of a function, struggling to effectively capture its high-frequency features. This paper is to address this issue. Notice that a function having only low frequency components may be well-represented by a shallow neural network (SNN), a network having only a few layers. By observing that composition of low frequency functions can effectively approximate a high-frequency function, we propose to learn a function containing high-frequency components by composing …

Probing The Ising Model’S Thermodynamics Through Restricted Boltzmann Machines, Xiaobei (Emma) Zhang

HMC Senior Theses

This thesis explores the connection between physics and machine learning by using Restricted Boltzmann Machines (RBMs) to study the thermodynamic properties of the Ising model. The Ising model is a simple but realistic model that captures the magnetic behavior of a system, where spins occupy a lattice of sites and different spin configurations correspond to different energies. The model exhibits phase transitions between ferromagnetic and paramagnetic phases as a function of temperature. RBMs are two-layered neural networks that can learn probability distributions over binary spins. The study generates 2D Ising model data at different temperatures using Monte Carlo simulations, including …

Exploring Sigmoidal Bounded Confidence Models With Mean Field Methods, Tian Dong

HMC Senior Theses

Mathematicians use models of opinion dynamics to describe how opinions in a group of people change over time, which can yield insight into mechanisms behind phenomena like polarization and consensus. In these models, mathematicians represent the community as a graph, where nodes represent agents and edges represent possible interactions. Opinion updates are modeled with a system of differential equations (ODEs). Our work focuses on the sigmoidal bounded confidence model (SBCM), where agents update their opinion toward a weighted average of their neighbors' opinions by weighting similar opinions more heavily. Using tools developed in physics (mean-field theory), we derive a continuity …

Integrable Evolution Equations, Ramesh C. Sharma

Mathematics Dissertations - Archive

Integrable evolution equations are certain nonlinear partial differential equations or semidiscrete nonlinear difference equations that are used to model wave propagation in various media. The goal of this thesis is to present the derivation of integrable evolution equations in a way accessible to nonexperts in the field of integrable systems and to illustrate those derivations by various explicit examples. In the case of nonlinear partial differential equations, both the spacial variable x and temporal variable t are continuous independent variables. In the case of semidiscrete nonlinear difference equations, the spacial variable n is a discrete independent variable and the temporal …

New Methods In Electrical Source Imaging Based On Eeg And Post-Mortem Pathology Data, Julio Cesar Enciso Alva

Mathematics Dissertations - Archive

A central task for Neuroscience is to determine the location of electrical activity of neural origin inside the brain. Electrical signals can be recorded at a high resolution in time but low resolution in space, thus making it difficult to locate their source unambiguously. Electrical Source Imaging (ESI) is a particular framework for neural electrical source location; it is possible by modeling any additional information we may have about the electrical sources. For instance, minimal-norm estimators assume that the most plausible estimation is that with a lower norm. However, these estimators possess a low resolution in space.

In this work, …

Simulation Of Wave Propagation In Granular Particles Using A Discrete Element Model, Syed Tahmid Hussan

College of Graduate Studies: Theses & Dissertations

The understanding of Bender Element mechanism and utilization of Particle Flow Code (PFC) to simulate the seismic wave behavior is important to test the dynamic behavior of soil particles. Both discrete and finite element methods can be used to simulate wave behavior. However, Discrete Element Method (DEM) is mostly suitable, as the micro scaled soil particle cannot be fully considered as continuous specimen like a piece of rod or aluminum. Recently DEM has been widely used to study mechanical properties of soils at particle level considering the particles as balls. This study represents a comparative analysis of Voigt and Best …

Quantification Of Antiviral Drug Tenofovir (Tfv) By Surface-Enhanced Raman Spectroscopy (Sers) Using Cumulative Distribution Functions (Cdfs), Marguerite R. Butler, Jana Hrncirova, Meredith Clark, Sucharita Dutta, John B. Cooper

Chemistry & Biochemistry Faculty Publications

Surface-enhanced Raman spectroscopy (SERS) is an ultrasensitive spectroscopic technique that generates signal-enhanced fingerprint vibrational spectra of small molecules. However, without rigorous control of SERS substrate active sites, geometry, surface area, or surface functionality, SERS is notoriously irreproducible, complicating the consistent quantitative analysis of small molecules. While evaporatively prepared samples yield significant SERS enhancement resulting in lower detection limits, the distribution of these enhancements along the SERS surface is inherently stochastic. Acquiring spatially resolved SERS spectra of these dried surfaces, we have shown that this enhancement is governed by a power law as a function of analyte concentration. Consequently, by definition, …

Using A Degree-Based Network Model To Understand And Control Traffic Jams In The Atlanta Metropolitan Area, Ian Salamone-Lent, Theresa Washington, Asma Azizi

The Kennesaw Journal of Undergraduate Research

Traffic congestion is an enduring problem for major metropolitan areas, such as Atlanta, GA. Our goal is to understand the nature of traffic congestion patterns in the highway system of Cobb County in Atlanta, GA. We created a road network representative of the Cobb County highway system and then superimposed a degree-based SIR model to simulate traffic congestion on that network. The model’s parameters, propagation and dissipation rates, were estimated using empirical traffic data, which are vehicles’ speed time series and speed limit of each road in the network. We then conducted a local sensitivity analysis of the model’s key …

Mathematical Modeling Of Microscale Biology In Polyelectrolyte Brushes, William J. Ceely

CGU Theses & Dissertations

Biological macromolecules including nucleic acids, proteins, and glycosaminoglycans are typically anionic and can span domains of up to hundreds of nanometers and even micron length scales. The structures exist in crowded environments that are dominated by multivalent electrostatic interactions that can be modeled using mean-field continuum approaches that represent underlying molecular nanoscale biophysics. In this thesis, we develop such models for polyelectrolyte brushes using both steady state modified Poisson-Boltzmann models and transient modified Poisson-Nernst-Planck models that incorporate important ion-specific (Hofmeister) effects. The transient model enables observation of the relative physical effects as an initial non-equilibrium state relaxes to the steady …

Reducing Generalization Error In Multiclass Classification Through Factorized Cross Entropy Loss, Oleksandr Horban

CMC Senior Theses

This paper introduces Factorized Cross Entropy Loss, a novel approach to multiclass classification which modifies the standard cross entropy loss by decomposing its weight matrix W into two smaller matrices, U and V, where UV is a low rank approximation of W. Factorized Cross Entropy Loss reduces generalization error from the conventional O( sqrt(k / n) ) to O( sqrt(r / n) ), where k is the number of classes, n is the sample size, and r is the reduced inner dimension of U and V.

Unveiling The Power Of Shor's Algorithm: Cryptography In A Post Quantum World, Dylan Phares

CMC Senior Theses

Shor's Algorithm is an extremely powerful tool, in utilizing this tool it is important to understand how it works and why it works. As well as the vast implications it could have for cryptography

Structured Invariant Subspace And Decomposition Of Systems With Time Delays And Uncertainties, Huan Phan-Van, Keqin Gu

SIUE Faculty Research, Scholarship, and Creative Activity

This article discusses invariant subspaces of a matrix with a given partition structure. The existence of a nontrivial structured invariant subspace is equivalent to the possibility of decomposing the associated system with multiple feedback blocks such that the feedback operators are subject to a given constraint. The formulation is especially useful in the stability analysis of time-delay systems using the Lyapunov-Krasovskii functional approach where computational efficiency is essential in order to achieve accuracy for large scale systems. The set of all structured invariant subspaces are obtained (thus all possible decompositions are obtained as a result) for the coupled differential-difference equations …

Weak-Strong Beam-Beam Simulation With Crab Cavity Noises For The Hadron Storage Ring Of The Electron-Ion Collider, Y. Luo, B. Gamage, C. Montag, D. Marx, D. Xu, F. Willeke, H. Huang, H. Lovelace Iii, J. Berg, M. Blaskiewicz, S. Peggs, T. Satogata, V. Ptitsyn, V. Morozov, Y. Hao

Mathematics & Statistics Faculty Publications

The Electron Ion Collider (EIC), to be constructed at Brookhaven National Laboratory, will collide polarized high-energy electron beams with hadron beams, achieving luminosities of up to 1 X 10³⁴cm⁻²s⁻¹ in the center-mass energy range of 20-140 GeV. Crab cavities are employed to compensate for the geometric luminosity loss caused by a large crossing angle of 25 mrad in the interaction region. The phase noise in crab cavities will induce a significant emittance growth for the hadron beams in the Hadron Storage Ring (HSR). Various models have been utilized to study the effects of crab cavity …

A Novel Computational Analysis Of Boundary-Driven Two-Dimensional Heat Flow With Internal Heat Generation, Muhammad Abid, Madiha Bibi, Nasir Yasin, Muhammad Shahid

Mathematics & Statistics Faculty Publications

Accurate numerical solution of parabolic and elliptic partial differential equations governing two-dimensional heat transfer is critical for engineering simulations but computationally challenging. This work employs key numerical techniques finite differences, conjugate gradients, and Crank-Nicolson time stepping to solve the heat diffusion equation and analyze method performance. The Poisson equation is discretized using second-order central finite differences and solved with the conjugate gradient approach to determine the steady state solution. The transient heat equation is integrated in time via the Crank-Nicolson implicit scheme, also utilizing conjugate gradients. The methods effectively compute solutions matching analytical and boundary conditions. Convergence and stability are …

A New Proper Orthogonal Decomposition Method With Second Difference Quotients For The Wave Equation, Andrew Calvin Janes

Masters Theses

"Recently, researchers have investigated the relationship between proper orthogonal decomposition (POD), difference quotients (DQs), and pointwise in time error bounds for POD reduced order models of partial differential equations. In \cite {Sarahs}, a new approach to POD with DQs was developed that is more computationally efficient than the standard DQ POD approach and it also retains the guaranteed pointwise in time error bounds of the standard method. In this thesis, we extend the new DQ POD approach from \cite {Sarahs} to the case of second difference quotients (DDQs). Specifically, a new POD method utilizing DDQs and only one snapshot and …

Cryptographic Algorithms, Cryptocurrencies, And A Predictive Model Of Bitcoin Value By Pls Regression, Paul Kenneth O'Connor

Masters Theses

"With the invention of Bitcoin in 2009, as a seemingly timed response to the ongoing financial crisis, the popularity of the cryptocurrency has since continued to grow. Just this year, the Security Exchange Commission approved Bitcoin for exchange traded funds, allowing major investment firms to begin product trading. With this approval, and during this very moment of writing, Bitcoin has entered a bull market and reached a record value of over 72,000 USD. In addition, the Bitcoin halving event in April of 2024 is expected to increase demand even further. It has been anticipated that Bitcoin and other cryptocurrencies will …