Investigating The Role Of Protein Phosphatase 2a In The Salt Stress Response In Arabidopsis Thaliana,
2020
University of New Hampshire
Investigating The Role Of Protein Phosphatase 2a In The Salt Stress Response In Arabidopsis Thaliana, Daniel J. Dirocco
Honors Theses and Capstones
Protein Phosphatase 2A (PP2A) is a ubiquitous enzyme in eukaryotes that regulates a large array of cellular signaling processes. PP2A is composed of three subunits: catalytic C subunit, regulatory B subunit, and scaffolding/regulatory A subunit. In Arabidopsis thaliana, the A subunit has three isoforms - A1, A2, and A3 - that are highly conserved at the protein level, indicating that these proteins may be functionally interchangeable. In comparison to wildtype plants, seedlings with a mutation in the A1 gene have roots with obvious root cell file rotation or twisting under conditions of moderate salt stress. Twisted root cells result …
Impacts Of Rock Climbing On Lichen And Bryophyte Cliff Communities In The Arid West,
2020
Eastern Washington University
Impacts Of Rock Climbing On Lichen And Bryophyte Cliff Communities In The Arid West, Giovanna M. Bishop
2020 Symposium Posters
Lichens and bryophytes make up the majority of the diversity and cover in cliff systems around the world. Recently, with the rapid rise of rock climbing, there are concerns rock climbers are negatively impacting cliff communities. My study will compare climbed and unclimbed granite cliffs to better understand the impacts of rock climbing on lichen and bryophyte diversity and cover in eastern Washington. The objectives of this study are to assess the impacts of rock climbing on lichen and bryophyte cliff community diversity and cover and improve route development and cliff management practices for lichens and bryophytes. This study will …
Small-Scale Population Connectivity And Genetic Structure In Canada Thistle (Cirsium Arvense),
2020
Old Dominion University
Small-Scale Population Connectivity And Genetic Structure In Canada Thistle (Cirsium Arvense), Mahboubeh Hosseinalizadeh Nobarinezhad, Lavanya Challagundla, Lisa E. Wallace
Biological Sciences Faculty Publications
Premise of research. Population connectivity, the exchange of genes among geographically separated subpopulations, is thought to be a key process for the maintenance of genetic diversity and the survival of invasive species in newly colonized areas. Plant populations' degree of genetic connectivity, which occurs via pollen and seed dispersal, leads to different degrees of genetic admixture and genetic structure. Environmental barriers and differential selection pressures that are variable across time and space tend to alter genetic structure within and among populations via restriction or facilitation of gene flow. Canada thistle, an invasive species of the United States and Canada, is …
Evaluating The Impact Of Grafting On Local Tomato Production In Nebraska,
2020
University of Nebraska-Lincoln
Evaluating The Impact Of Grafting On Local Tomato Production In Nebraska, Raihanah Hassim, Samuel E. Wortman, Ashley A. Thompson, Stacy A. Adams
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Grafting has been successfully used in vegetable production for tomatoes, peppers, eggplants, cucumbers, and watermelon. Besides its usefulness for managing soil-borne diseases, grafting can improve nutrient uptake and yield. However, few studies have assessed the effects of grafting and soil fertility management on yield of open field-grown tomatoes in the Midwest. Therefore, the objective of this two-year research was to better document the effects of grafting heirloom and hybrid tomato cultivar onto hybrid tomato rootstocks on tomato yield and quality. The field experiments were located at the University of Nebraska Lincoln - East Campus in Lincoln, West Central Research and …
Metabolite Profiling Of Ganoderma-Infected Oil Palm Tree Grown On Ultisol And Oxisol Soil,
2020
Universiti Malaya
Metabolite Profiling Of Ganoderma-Infected Oil Palm Tree Grown On Ultisol And Oxisol Soil, Ahmad Muhamad Fadhil
Student Works (2020-2029)
The oil palm industry is a pillar of the Malaysian economy and plays a pivotal role in feeding and fueling a growing global population. In 2018, oil palm contributed 37.9% or RM37.7 billion to the country's' Gross Domestic Products (GDP) of agriculture sector. Despite achieving significant achievements in the industry, Ganoderma sp. infection that cause basal stem rot (BSR) and upper stem rot (USR) disease are considered a threat. The palm oil industry is expected to experience significant losses, thereby affecting yield production and ultimately the dead of trees. Some factors have been reported to affect the occurrence of the …
Benchmarking The Agronomic Performance Of Biodegradable Mulches Against Polyethylene Mulch Film: A Meta‐Analysis,
2020
Federal University of Paraná
Benchmarking The Agronomic Performance Of Biodegradable Mulches Against Polyethylene Mulch Film: A Meta‐Analysis, Mauro B.D. Tofanelli, Samuel E. Wortman
Department of Agronomy and Horticulture: Faculty Publications
Growers are interested in biodegradable alternatives to petroleum‐based polyethylene mulch film (PEM). However, many growers cite limited knowledge about biodegradable mulch films (BDMs) as a significant barrier to adoption. Agronomic field tests of BDMs are often limited temporally or spatially, and the variability of performance results relative to PEM may be contributing to this perceived knowledge gap. Our objective was to use data available in the scientific literature to provide the first quantitative performance benchmark of BDMs against PEM. We extracted data from 66 articles for meta‐analysis. Response ratios were calculated for comparison of BDMs relative to black PEM, and …
Hysplit As An Environmental Impact Assessment Tool To Study The Data Discrepancies Between Olea Europaea Airborne Pollen Records And Its Phenology In Sw Spain,
2020
Universidad de Extremadura
Hysplit As An Environmental Impact Assessment Tool To Study The Data Discrepancies Between Olea Europaea Airborne Pollen Records And Its Phenology In Sw Spain, Alejandro Monroy-Colín, J. M. Maya-Manzano, Rafael Tormo-Molina, Raúl Pecero-Casimiro, María Ángeles Gonzalo-Garijo, Santiago Fernández-Rodríguez
Articles
The olive tree (Olea europaea) is a native evergreen tree in the Mediterranean region, being one of the most important causes of seasonal respiratory allergies in Mediterranean countries. This work aims to relate flowering phenology, source tree distribution, meteorology, and airborne pollen records for this species and to analyse the possible arrival of air masses from distant areas during days when differences between the phenological and pollen peaks. Aerobiological sampling was carried out in Badajoz (SW Spain) for 4 years (2016–2019) using a Hirst volumetric sampler. Trees were geolocalized in the city and surrounding areas. The pollination phenology of 15 …
Growth And Development, From: Forages: The Science Of Grassland Agriculture, Volume Ii,
2020
Agricultural Research Service, USDA
Growth And Development, From: Forages: The Science Of Grassland Agriculture, Volume Ii, Robert B. Mitchell, Daren Redfearn, Kenneth J. Moore
Department of Agronomy and Horticulture: Faculty Publications
The growth and development of forage plants is an amazing process. In some annual grasses such as cereal rye, plants can go from the late vegetative stage to fully-flowered in less than two weeks. Conversely, some perennial grasses like indiangrass can go from the vegetative stage to the elongation stage, then enter a quiescent phase for several weeks until adequate moisture is available which then moves plants into the flowering stages to complete the seed production process. Understanding the developmental morphology of forage plants is important for making good management decisions. Many such decisions involve timing the initiation or termination …
Land-Use Type As A Driver Of Large Wildfire Occurrence In The U.S. Great Plains,
2020
University of Nebraska-Lincoln
Land-Use Type As A Driver Of Large Wildfire Occurrence In The U.S. Great Plains, Victoria M. Donovan, Carissa L. Wonkka, David A. Wedin, Dirac Twidwell
Department of Agronomy and Horticulture: Faculty Publications
Wildfire activity has surged in North America’s temperate grassland biome. Like many biomes, this system has undergone drastic land-use change over the last century; however, how various land-use types contribute to wildfire patterns in grassland systems is unclear. We determine if certain land-use types have a greater propensity for large wildfire in the U.S. Great Plains and how this changes given the percentage of land covered by a given land-use type. Almost 90% of the area burned in the Great Plains occurred in woody and grassland land-use types. Although grassland comprised the greatest area burned by large wildfires, woody vegetation …
A Justification For Continued Management Of Turfgrass During Economic Contraction,
2020
The Univeristy of Tennessee
A Justification For Continued Management Of Turfgrass During Economic Contraction, James T. Brosnan, Ambika Chandra, Roch E. Gaussoin, Alec Kowalewski, Bernd Leinauer, Frank S. Rossi, Douglas J. Soldat, John C. Stier, J. Bryan Unruh
Department of Agronomy and Horticulture: Faculty Publications
A novel coronavirus, termed COVID-19, spread worldwide and become a global pandemic in 2020. Forecasts show that COVID-19 will cause substantial economic contraction affecting almost every industry. Managed turfgrass, particularly in urban settings, has many positive societal and environmental benefits. In a contracted economy, will resources be available to manage turfgrass to achieve these benefits? In this paper, we outline the benefits of managed turfgrass on golf courses, playing fields, recreational parks, and urban landscapes to assist decision makers with resource allocation in the COVID-19 era.
Training Future Agriculture Professionals In Landowner–Tenant Conservation Decision-Making,
2020
University of Nebraska - Lincoln
Training Future Agriculture Professionals In Landowner–Tenant Conservation Decision-Making, Andrea Basche, Angie Carter
Department of Agronomy and Horticulture: Faculty Publications
The landowner–tenant relationship is important to the implementation of conser- vation on agricultural lands. Women own or co-own a significant portion of U.S. farmland yet are underrepresented in conservation research. The next generation of agriculture professionals can benefit from first-hand experience in assisting women landowners and their tenants in navigating the complexities of conser- vation decision-making. This article analyzes undergraduate student perceptions of landowner–tenant relationships in conservation management through their engagement in case studies with women landowner–tenant pairs in the Western Corn Belt. Student groups were asked to complete a management improvement plan that both incorporated the agronomic and conservation …
Winter Cover Crop Root Biomass Yield In Corn And Soybean Systems,
2020
University of Nebraska-Lincoln
Winter Cover Crop Root Biomass Yield In Corn And Soybean Systems, Sabrina J. Ruis, Humberto Blanco-Canqui, Katja Koehler-Cole, Paul J. Jasa, G. Slater, Roger W. Elmore, Richard B. Ferguson
Department of Agronomy and Horticulture: Faculty Publications
Cover crop (CC) roots are critical for soil ecosystem service delivery including soil stabilization, C and nutrient cycling, soil health improvement, and others. However, most CC studies only evaluate CC aboveground biomass yield, neglecting the belowground portion of the plant. The objectives of this study were to quantify the impacts of (a) CC planting (pre- and post-harvest) dates and (b) early (2–4 wk before main crop planting) and late (at main crop planting) CC termination with and without corn (Zea mays L.) residue removal on root biomass yield. We assessed the effects of CC planting or termination dates on root …
Semi-Supervised Adversarial Domain Adaptation For Seagrass Detection Using Multispectral Images In Coastal Areas,
2020
Old Dominion University
Semi-Supervised Adversarial Domain Adaptation For Seagrass Detection Using Multispectral Images In Coastal Areas, Kazi Aminul Islam, Victoria Hill, Blake Schaeffer, Richard Zimmerman, Jiang Li
Electrical & Computer Engineering Faculty Publications
Seagrass form the basis for critically important marine ecosystems. Previously, we implemented a deep convolutional neural network (CNN) model to detect seagrass in multispectral satellite images of three coastal habitats in northern Florida. However, a deep CNN model trained at one location usually does not generalize to other locations due to data distribution shifts. In this paper, we developed a semi-supervised domain adaptation method to generalize a trained deep CNN model to other locations for seagrass detection. First, we utilized a generative adversarial network loss to align marginal data distribution between source domain and target domain using unlabeled data from …
Floral Trait Architecture In Crop Sunflower (Helianthus Annuus) Under Drought Conditions,
2020
Central Washington University
Floral Trait Architecture In Crop Sunflower (Helianthus Annuus) Under Drought Conditions, Lauren Segarra
All Master's Theses
Longer and more intense droughts are predicted to become more common in the coming century due to anthropogenic climate change. Drought can reduce crop yield and decrease food security. In order to mitigate the negative effects of drought on crop production, it is important to elucidate the underlying mechanisms that promote drought stress resistance in crop plants. Floral traits impact yield, especially in oilseed crops such as sunflower (Helianthus annuus), but their susceptibility to drought stress is understudied. The goal of this study was to describe the floral trait architecture of H. annuus crop lines under drought versus …
Principles, Applications, And Biosafety Of Plant Genome Editing Using Crispr-Cas9,
2020
Kuztown University of Pennsylvania
Principles, Applications, And Biosafety Of Plant Genome Editing Using Crispr-Cas9, Kaoutar El-Mounadi, María Luisa Morales-Floriano, Hernan Garcia-Ruiz
Department of Plant Pathology: Faculty Publications
The terms genome engineering, genome editing, and gene editing, refer to modifications (insertions, deletions, substitutions) in the genome of a living organism. The most widely used approach to genome editing nowadays is based on Clustered Regularly Interspaced Short Palindromic Repeats and associated protein 9 (CRISPR-Cas9). In prokaryotes, CRISPR-Cas9 is an adaptive immune system that naturally protects cells from DNA virus infections. CRISPR-Cas9 has been modified to create a versatile genome editing technology that has a wide diversity of applications in medicine, agriculture, and basic studies of gene functions. CRISPR-Cas9 has been used in a growing number of monocot and dicot …
The Limits Of Lead (Pb) Phytoextraction And Possibilities Of Phytostabilization In Contaminated Soil: A Critical Review,
2020
CUNY Advanced Science Research Center
The Limits Of Lead (Pb) Phytoextraction And Possibilities Of Phytostabilization In Contaminated Soil: A Critical Review, Sara Perl Egendorf, Peter M. Groffman, Gerry Moore, Zhongqi Cheng
Advanced Science Research Center
This review article focuses on lead (Pb), one of the most ubiquitous and harmful toxicants found in soil. Our objective is to address misconceptions regarding the ability of plants to uptake Pb through their roots and translocate it to above-ground tissues, and their ability to act as hyperaccumulators and thereby phytoextract Pb. In accordance with a number of cited definitions, we suggest that species capable of Pb phytoextraction can be rated with the following three criteria: (1) root uptake above a nominal threshold of 1,000 mg Pb/kg, (2) bioconcentration factor (BCF or shoot/soil concentration) >1, and (3) translocation factor (TF …
Trees, Fungi, Insects: How Host Plant Genetics Builds A Community,
2020
West Virginia University
Trees, Fungi, Insects: How Host Plant Genetics Builds A Community, Sandra Jeanne Simon
Graduate Theses, Dissertations, and Problem Reports (ETD)
Organisms, such as fungi and insects, can cause millions of acres of agricultural and forest damage, while others provide billions of dollars in ecological services such as education, aesthetic enjoyment, pollination, and gardening. Plant breeding and biotechnology can potentially help establish a balance between the proliferation of detrimental pests and attraction of beneficial insects. Variation in plant physiological and morphological characteristics are extremely important in the ability of host tissues to support many different types of organisms. When that variation is genetically heritable in a plant population, shifts in the underlying genes can have predictable consequences in structuring entire ecosystems. …
Mutations In Virus-Derived Small Rnas,
2020
University of Nebraska-Lincoln
Mutations In Virus-Derived Small Rnas, Deepti Nigam, Katherine Latourrette, Hernan Garcia Ruiz
Department of Plant Pathology: Faculty Publications
RNA viruses exist as populations of genome variants. Virus-infected plants accumulate 21–24 nucleotide small interfering RnAs (siRnAs) derived from viral RnA (virus-derived siRnAs) through gene silencing. This paper describes the profile of mutations in virus-derived siRNAs for three members of the family Potyviridae: Turnip mosaic virus (tuMV), Papaya ringspot virus (pRSV) and Wheat streak mosaic virus (WSMV). for tuMV in Arabidopsis thaliana, profiles were obtained for mechanically inoculated rosette leaves and systemically infected cauline leaves and inflorescence. Results are consistent withselection pressure on the viral genome imposed by local and systemic movement. By genetically removing gene silencing in the plant …
Variation Profile Of The Orthotospovirus Genome,
2020
University of Nebraska-Lincoln
Variation Profile Of The Orthotospovirus Genome, Deepti Nigam, Hernan Garcia Ruiz
Department of Plant Pathology: Faculty Publications
Orthotospoviruses are plant-infecting members of the family Tospoviridae (order Bunyavirales), have a broad host range and are vectored by polyphagous thrips in a circulative- propagative manner. Because diverse hosts and vectors impose heterogeneous selection constraints on viral genomes, the evolutionary arms races between hosts and their pathogens might be manifested as selection for rapid changes in key genes. These observations suggest that orthotospoviruses contain key genetic components that rapidly mutate to mediate host adaptation and vector transmission. Using complete genome sequences, we profiled genomic variation in orthotospoviruses. Results show that the three genomic segments contain hypervariable areas at homologous locations …
The Lateral Root Density Gene Regulates Root Growth During Water Stress In Wheat,
2020
University of Nebraska - Lincoln
The Lateral Root Density Gene Regulates Root Growth During Water Stress In Wheat, Dante F. Placido, Jaspreet Sandhu, Shirley Sato, Natalya Nersesian, Truyen Quach, Thomas E. Clemente, Paul E. Staswick, Harkamal Walia
Department of Agronomy and Horticulture: Faculty Publications
Drought stress is the major limiting factor in agriculture. Wheat, which is the most widely grown crop in the world, is predominantly cultivated in drought-prone rainfed environments. Since roots play a critical role in water uptake, root response to water limitations is an important component for enhancing wheat adaptation. In an effort to discover novel genetic sources for improving wheat adaptation, we characterized a wheat translocation line with a chromosomal segment from Agropyron elongatum, a wild relative of wheat, which unlike common wheat maintains root growth under limited-water conditions. By exploring the root transcriptome data, we found that reduced …
