Plant Biology Commons^™

Genome-Wide Association Analysis For Emergence Of Deeply Sown Rice (Oryza Sativa) Reveals Novel Aus-Specific Phytohormone Candidate Genes For Adaptation To Dry-Direct Seeding In The Field, Sandeep A. Sakhale, Shailesh Yadav, Lindsay V. Clark, Alexander E. Lipka, Arvind Kumar, Erik J. Sacks

Department of Agronomy and Horticulture: Faculty Publications

Dry direct-seeded rice (dry-DSR) is typically sown deeply to circumvent the need for irrigation, and thus seedling emergence is a crucial trait affecting plant stand and yield. To breed elite cultivars that use less water and are climate-resilient, an understanding of the genomic regions and underlying genes that confer emergence in deeply sown dry-DSR would be highly advantageous. A combined diversity panel of 470 rice accessions (RDP1 plus aus subset of 3K RGP) was evaluated with 2.9 million single nucleotide polymorphisms (SNPs) to identify associations with dry-DSR traits in the field and component traits in a controlled-environment experiment. Using genome-wide …

Reintroducing Hemp (Rongony) In The Material Palette Of Madagascar: A Study On The Potential Of Hemp Clay Components And Its Impact On Social And Ecological Communities., Henintsoa Thierry Andrianambinina

Masters Theses

When mentioning the word hemp, especially in the local language of Madagascar, the literal translation does not set it apart from marijuana, as they are both called “rongony” - creating the stigma around hemp as the negative stereotype of marijuana. However, the material has been used by the ancestors of Madagascar, as well as across cultures, in its fibrous form to produce fabrication like textile goods and packaging. During colonization, the prohibition of hemp intensified, and since then, any activity related to either of these plants is prohibited and will end in severe punitive measures. This thesis explores the strengths …

International Rice Outlook: International Rice Baseline Projections 2022-2032, A. Durand-Morat, S. Bairagi, W. Mulimbi

AAES Research Reports and Research Bulletins

Rice prices in Asia increased since the Summer of 2022 mainly due to worries about a reduction in rice production in India caused by an abnormal monsoon season (Fig. 1). The upward trend in export prices solidified after India implemented a 20% export tariff on brown and milled long-grain rice, and a complete ban on exports of broken rice, in September 2022 to curve down exports and release the pressure on domestic rice prices. India’s rice export prices increased since then and proportionally to the value of the export tax. The latest estimates put rice production at 128 million metric …

Fluidity And Inconstancy: Australian Bush Tomatoes As An Exemplar Of Non-Normative Sex Expression, Christopher T. Martine

Faculty Journal Articles

Solanum, a genus of ~1500 global species, is one of the more interesting plant groups in which to study reproductive biology and ecology. Overwhelmingly, species in this group express full cosexuality, where individual plants have flowers containing both fully-functioning “male” (staminate) and “female” (carpellate) organs. However, there have been multiple and widespread evolutionary transitions within the genus to non-normative variations on this ancestral condition. Australian bush tomatoes (ca. 40 species) are especially diverse in this regard, with uncommon variation and combinations of unisexuality and cosexuality -- including, most notably, two sexual systems known as dioecy (unisexual male or female …

Compositional Properties Of Flours And Starches From The Philippine National Seed And Industry Council-Registered Root Crops, Edgardo E. Tulin, Chinelo M. Cardaño, Anabella B. Tulin, Ma. Theresa P. Loreto, Ea Kristine Clarisse B. Tulin, Ma. Villa N. Yu

The Philippine Agricultural Scientist

Based in the Visayas State University, Philippines, the germplasm collection of the Philippine Root Crops Research and Training Center (PhilRootcrops) is home to several varieties that have not been fully characterized for their potential use in the production of functional foods. This study evaluated the compositional properties, amylose/amylopectin ratio, and glycemic index of flour and starches of 10 varieties of cassava (Manihot esculenta Crantz), sweet potato (Ipomoea batatas L. (Lam)), and taro (Colocasia esculenta L. Schott); 8 varieties of yam (Dioscorea alata L.); and 5 varieties of arrowroot (Maranta arundinacea L.), which was the recommended …

Impact Of Nitrogen Availability On The Accumulation Of Vegetative Lipids In Sorghum, Leticia Felicio Pasqualino

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Sorghum (Sorghum bicolor (L.) Moench) is a versatile and prosperous feedstock crop for renewable energy production. With the increase in bioenergy demand, the production of higher oil content per biomass in a feedstock crop is a highly desirable trait for the biofuel conversion process yield. Especially if this outcome can be achieved using fewer inputs in the field, such as nitrogen. In microalgae species, nitrogen limitation has been associated with changes in the carbon storage metabolic pathway favoring triacylglycerol (TAG) accumulation. In this context, this study aimed to assess whether nitrogen starvation would result in a similar outcome in …

Arkansas Soybean Performance Tests 2022, J. F. Carlin, R. B. Mulloy, R. D. Bond

Arkansas Agricultural Experiment Station Research Series

Soybean variety and strain performance tests are conducted each year in Arkansas by the University of Arkansas System Division of Agriculture’s Arkansas Crop Variety Improvement Program. The tests provide information to companies developing varieties and/ or marketing seed within the state, and aid the Arkansas Cooperative Extension Service in formulating variety recommendations for soybean producers.

Do Cover Crop Mixtures Improve Soil Physical Health More Than Monocultures?, Humberto Blanco-Canqui

Department of Agronomy and Horticulture: Faculty Publications

Rationale and Purpose — Adding multispecies cover crop (CC) mixtures could diversify the current simplified crop rotations and enhance soil health more than monoculture CCs. Further, CC mixtures with diverse plant species could adapt better to changing climatic and environmental conditions than monoculture CCs. However, our current understanding of the soil benefits of CC mixtures is still limited. This review discussed whether CC mixtures are better than monoculture CCs to improve soil physical health.

Methods — All studies published up to May 25, 2023, comparing soil physical properties between CC mixtures and their constituents grown as monocultures were searched in …

Physico-Chemical Characteristics Of Ensiled Cassava (Manihot Esculenta Crantz) And Sweetpotato (Ipomoea Batatas L. (Lam.)) Foliage, And Fermentation Kinetics Of Cassava Silage, Arnel N. Del Barrio, Christian V. Lualhati, Kimberly I B. Turaja, Ralph Jovi B. Saldajeno, Mauricio P. Bayubay Jr, Chesa A. Elenterio, Babylyn T. Salazar, Gerard F. Guadayo, Kamla Zyra G. Lavadia, Menandro M. Loresco

The Philippine Agricultural Scientist

This study was conducted to determine the physico-chemical characteristics of ensiled cassava (Manihot esculenta Crantz) and sweetpotato (Ipomoea batatas L. (Lam.)) foliage with or without additives molasses and rice bran. Six treatment combinations were from two crop species (cassava and sweetpotato) and three additives (without additive, 10% molasses, and 10% rice bran). The physical (color, odor, texture) and chemical characteristics (pH, total soluble sugars, Flieg point, dry matter, organic matter, ash, crude protein, NDF, ADF, hemicellulose) of the samples were evaluated following standard procedures. Fermentation kinetics of cassava foliage silage and ruminal in situ DM degradability of cassava …

Effect Of Condensed Tannins In Sainfoin On In Vitro Protein Solubility Of Lucerne, J. Aufrère, M. Dudilieu, C. Poncet, R. Baumont

IGC Proceedings (1977-2023)

Proteins of fresh legume forages such as lucerne are highly degraded in the rumen, resulting in their inefficient use by the animal. The condensed tannins (CT) present in some forages can improve the nutritional value of these forages and of associated feeds in the diet. Previous in vitro work (Waghorn & Shelton, 1997) showed that CT from Lotus corniculatus are able to bind with and precipitate protein from a ryegrass/clover pasture, but when these forages were fed to sheep, the CT effects on digestion and animal performance were weak. This revealed a need for a better understanding of the mechanism …

Herbage Production, Nitrogen Fixation And Condensed Tannin Concentrations In Lotus Glaber Mill. Germplasm, H. Acuña, M. Figueroa, P. Hellman, A. Concha

IGC Proceedings (1977-2023)

Lotus glaber (Lg) grows on clay, sandy and medium textured soils in central Chile (32º to 38º S). The diversity of environments where the species grows naturally supports the hypothesis that genetic variability would be found. The objectives of the experiment were to characterise accessions of Lg collected in the region for dry matter (DM) production, comparative capacity to fix atmospheric N and condensed tannins (CT) in Lg grown on clay soils used for cropping rice.

Condensed Tannins In Different Varieties Of Lotus Corniculatus, Christina L. Marley, Rhun Fychan, R. Jones

IGC Proceedings (1977-2023)

Research has shown that Lotus corniculatus may provide benefits as a grazing forage for ruminants, because of improved efficiency of protein utilisation in part due to the presence of condensed tannins (CT) in the forage. Lotus species have been found to contain different CT (Aerts et al., 1999). The aim of this experiment was to determine if differences exist in CT concentration among L. corniculatus varieties.

Ariation In Tannin Content And Morphological Traits In Lotus Corniculatus L. (Bird’S-Foot Trefoil), A. H. Marshall, F. Ribaimont, R. P. Collins, D. Bryant, M. T. Abberton

IGC Proceedings (1977-2023)

Lotus corniculatus L. (bird's-foot trefoil) is a potentially valuable species for UK grassland agriculture. The herbage contains proanthocyanidins, or condensed tannins (CT's), which help to reduce bloat, have anthelmintic properties, can protect protein in the rumen, and thus potentially reduce N losses to the environment. It is currently a relatively minor species within UK grassland, as available varieties lack persistence in mixed swards (Hopkins et al., 1996). The seed used is of foreign bred varieties with no varieties bred specifically for the UK environment. To explore the feasibility of breeding L. corniculatus for the UK, variation in morphological traits, …

Light Intensity Is Positively Correlated With The Synthesis Of Condensed Tannins In Lotus Corniculatus, Sergio Arcioni, T. Bovone, F. Damiani, F. Paolocci

IGC Proceedings (1977-2023)

The importance of Condensed Tannins (CT) in forage legumes has been well documented in several studies. The role of plant genetics in this field is the acquisition of competences in order to be able to modulate CT synthesis in leaves of these species. The role of light has been investigated in this work on the increase of condensed tannin levels in leaves of two contrasting genotypes of birdsfoot trefoil (Lotus corniculatus).

Condensed Tannin Concentration And Herbage Accumulation Of A White Clover Bred For Increased Floral Condensed Tannin, V. T. Burggraaf, S. L. Woodward, D. R. Woodfield, E. R. Thom, G. C. Waghorn, P. D. Kemp

IGC Proceedings (1977-2023)

White clover is a high quality feed for ruminants, however, its high protein content results in excessive urea excretion in urine and can cause bloat, reducing its potential value for animal production. The condensed tannins (CT) in some forages can reduce these problems, but plants may have poor agronomic performance. White clover produces CT in its flower heads, but herbage CT concentrations are normally too low to benefit animals. This paper reports CT concentrations and herbage accumulation over 2 years of an experimental line of white clover (HT) selected for increased flowering and floral CT concentrations.

Effects Of Simulated High-Sugar Forages On Grazing Behaviour Of Sheep, Gerald P. Cosgrove, A. J. Parsons

IGC Proceedings (1977-2023)

Sustaining an optimum composition in mixed-species pasture and in the diet of grazing animals is constrained by many factors. Altering the concentration of water soluble carbohydrate (WSC) of one species to improve its nutritional value for animals may not deliver the benefits in the assumed manner if it also affects preference and the balance of species in the pasture. Furthermore, associated changes in other constituents (e.g. fibre, protein) make it difficult to attribute animal responses solely to the manipulated trait (e.g. Lee et al. 2000). The objective of this study was to simulate changes in the concentration of water soluble …

High Floral Tannin White Clover Reduces Rumen Ammonia Concentrations In Dairy Cows, V. T. Burggraaf, G. C. Waghorn, S. L. Woodward, D. R. Woodfield, E. R. Thom, P. D. Kemp

IGC Proceedings (1977-2023)

White clover produces high quality forage for ruminant production, but it results in high rumen ammonia concentrations, indicating extensive protein degradation. The excess ammonia is absorbed through the rumen and excreted as urea in urine, at a cost to the animal and the environment. Condensed tannins (CT) contained in some forages reduce proteolysis in the rumen, which can lead to increased amino acid absorption and therefore improved animal performance. White clover produces CT in its flower heads, but concentrations are normally too low to benefit animals. This paper reports on comparisons of rumen ammonia concentrations in dairy cows grazing HT …

Substrate-Dependent Activation Of Polyphenol Oxidase In Red Clover, Ana L. Winters, F. R. Minchin, P. Morris

IGC Proceedings (1977-2023)

Polyphenol oxidases (PPO) are copper metaloproteins that catalyse the oxidation of o-diphenols to quinones, highly reactive molecules which readily bind to nucleophilic sites on cellular components and proteins. Red clover protein, due to this enzyme is resistant to protease degradation during. Theses enzymes (circa. 60-65 kDa) are located in the thylakoid lumen and can be converted to a 40-45 kDa form by proteolysis both in vitro and in vivo (Gelder et al., 1997). Conversion to the smaller form has been demonstrated to confer activity at neutral pH. Other treatments, such as the presence of lipids or detergents …

Variation In Protein Quality Of Forage Legumes During Spring Growth, M. Gierus, J. Kleen, F. Taube

IGC Proceedings (1977-2023)

The utilisation of forage legumes in combination with reduced N inputs as fertilisers is an alternative for the production of high quality forage. Although white clover (WC) is widely used in grassland and has a high content of crude protein (CP), a combination of this high CP content with a high proportion of rapidly-available proteins and fast degradation rate in the rumen may reduce the efficiency of N use by ruminants in comparison with other forage legumes. The objective of the present study was to investigate the variation in content of CP fractions A, B and C in different forage …

Effects Of Particle Size In Forage Samples For Protein Breakdown Studies, G. Pichard, C. Tapia

IGC Proceedings (1977-2023)

Coupling ruminal processes of hydrolysis and synthesis continues to be a research issue where more progress is needed. This requires the development of good protein assessment methods, particularly when representing the breakdown processes that occur in fresh pastures eaten by herbivores. Laboratory analyses need to deal with small and homogeneous samples, but the mechanical reduction of particle size may not reflect the actual digestion kinetics occurring when the original fresh forage is consumed. Such physical traits may alter the release of non-structural compounds and the penetration of microbial enzymes (Boudon et al., 2002). The objective of this work was …