Horticulture Commons^™

Carbon Source-Induced Changes In The Transcriptional Landscape Of Novacetimonas Hansenii, Bashir A. Akhoon, Jordan Corley, Jia W. Tan, Roberta Magnani, Rachel R. Schendel, Andrew Lipton, Carlos M. Rodriguez Lopez, Kendall R. Corbin

Horticulture Faculty Publications

Novacetimonas hansenii is a model organism for bacterial cellulose (BC) production, a biopolymer with broad industrial applications. To better understand its carbon source-dependent metabolism, we conducted the first time-resolved transcriptomic analysis of N. hansenii ATCC 23769 grown on five carbon sources (glucose, fructose, mannitol, galactose, and sucrose) across five time points (24–120 h). Glucose, fructose, and mannitol supported growth and efficient BC production, whereas galactose and sucrose resulted in poor yields, likely due to limited transport and enzymatic capacity. Solid-state NMR revealed that cellulose crystallinity and polymorphism were carbon source-dependent, with reduced bcsD expression correlating with lower crystallinity. Transcriptomic profiling …

A 725-Bp Quadruple Repeat In The Promoter Of Smmyb113 Is Associated With Light-Independent Anthocyanin Regulation In Eggplant, Zhilei Xia, Meng Yang, Yinggemei Huang, Bingxin Yu, Tingxia Wan, Duanhua Wang, Qian Li, Manoj Sapkota, Shuangshuang Yan, Bihao Cao, Zhengkun Qiu

Horticulture Faculty Publications

Eggplant exhibits a diverse range of fruit colors, making it an excellent model for studying fruit pigmentation and its genetic regulation. While genes responsible for green and photosensitive purple fruit have been identified, the genetic basis of the nonphotosensitive (NPS) fruit trait in eggplant has remained elusive. In this study, we characterized a major quantitative trait locus (QTL), SmNPS10.1, on chromosome 10 using QTL-seq. By combining linkage-based gene mapping with progeny testing, we fine-mapped SmNPS10.1 to a 33.58-kb interval, within which we identified SmMYB113, an R2R3-MYB transcription factor that regulates anthocyanin biosynthesis, as the candidate gene. Sequence analysis …

Soil Nutrient Sufficiency Versus Plant Nutrient Status In Compost-Amended Soils: Plant Tissue Analysis As A Diagnostic Tool, Chandralekha Joga Miss

Murray State Theses and Dissertations

This study evaluated whether Mehlich III soil nutrient sufficiency ratings reliably predict plant nutrient status and chlorophyll response across contrasting compost application histories. A greenhouse pot experiment was conducted with Chijimisai (Brassica rapa) planted in three treatment soils that had no compost (T1), moderate compost history (T2), and long-term hog manure compost application (T3). Plant performance was assessed through weekly shoot length and chlorophyll content (SPAD) measurements, leaf number at maturity, and leaf tissue nutrient analysis conducted at harvest. Soil test results indicated adequate to high nutrient levels across all three treatments. Leaf tissue analysis, however, revealed substantial …

Cordgrass (Spartina Alterniflora) In Bio-Restoration Integrated Coastal Substrate (Brics): Restoring The New England Coastline., Kaitlyn Frances Shelley

UNH URC Open (2026 and after)

The Engineering for Agri-Environment Laboratory (EAE) is dedicated to developing nature-based solutions that enhance the resilience of agricultural and coastal ecosystems. The study involves current work (trial 2) underway in Spring 2026 and Summer 2026, integrating principles of sustainable engineering and plant science. BRICS, our Bio-Restoration Integrated Coastal Substrate, proposes a new way to reduce erosion, stabilize root structures, provide a critical habitat for wildlife, and promote vegetation throughout the coast.

Extending The Fruiting Season With Container Grown Primocane-Fruiting Blackberries Grown In A High-Tunnel, Edwin James Tucker Iii

Graduate Theses/Dissertations

Blackberry production has become an important part of many small fruit orchard operations because they’re easy to grow, produce a large crop, and sell well at market. The current blackberry season in Missouri extends from mid-June to mid-August, depending on the cultivar chosen. This fruiting season is common for floricane-fruiting blackberry cultivars (cultivars that fruit on one-year old canes). Primocane-fruiting blackberry, or blackberries that fruit on current season growth, have the potential to further extend the harvest season of blackberry into September and October especially if grown in a high-tunnel. This study had two objectives. The first objective was to …

Hydroponics In The Classroom: Cultivating Plants, Captivating Young People, Stacy A. Adams, Christian Stephenson, Theresa James, Kim Todd

Department of Agronomy and Horticulture: Faculty Publications

Few students take the initiative to pursue coursework beyond that required for progression to graduation. Limited are opportunities that connect educational content to industry application, potentially inspiring young people towards impactful careers. The United States government has emphasized the importance of STEM education to ensure national security and to maintain economic competitiveness globally. STEM education is not a defined discipline but an approach for building knowledge through application and engagement. Developing and managing a hydroponics prototype provides numerous opportunities for embedding STEM content into a fun and interactive project. This poster provides inspiration for constructing a simple deep water culture …

Dwarf Tomato Cultivar Selection Guide, Abigail Lazier, Noah Langenfeld

Plants, Soils and Climate Student Research

This cultivar guide provides information on eighteen dwarf tomato cultivars grown at Utah State University. The goal is to help growers compare varieties based on plant size, productivity, fruit characteristics, and quality. Each cultivar profile includes a photograph of the plant along with key information on growth habit, size classification, yield, fruit size, and soluble solids (°brix). Whether you are selecting tomatoes for a patio, indoor garden, greenhouse, or other space-limited growing system, this guide offers an easy-to-use resource for identifying cultivars that best match your available space and production goals.

A Novel 3d Imaging Approach To Study Evolutionary Innovations In Solanaceae Inflorescences, Devin L. Jackson, Joonseog Kim, Wenheng Zhang Dr.

Undergraduate Research Posters

Understanding the relatedness of angiosperms and the evolution of their inflorescence remains challenging, as these structures are highly modified and prone to convergent evolution. The current research describing inflorescence architecture, whether genetically or morphologically focused, typically relies on text based explanations, 2D images, or 3D based models created with CAD modeling software. This creates a disparity in the reader's understanding of these models since descriptions rely heavily on the author's interpretation of the inflorescence. The goal of our study is to bridge this disconnection by producing anatomically and color-correct 3D inflorescence models using Solanaceae flowers that readers can explore directly, …

Pumpkin Variety Demonstration In West Michigan, 2025, Benjamin P. Werling, Justin Adams

Midwest Vegetable Trial Reports

Pumpkin variety demonstrations were conducted in 2025 at the West Central Michigan Research and Extension Center in Hart, MI, to compare yield, size class, and irrigation response among 21 pumpkin varieties representing jack-o’-lantern, large carving, and decorative cultivars. Demonstration plots were established on sandy soil under standard commercial fertility, pest management, and weed control practices. To assess irrigation effects under dry conditions, approximately 60% of each plot received supplemental sprinkler irrigation.

Jack-o’-lantern varieties varied in size distribution, with some producing a mix of 60, 45, and 30–35 count fruit with few larger-sized pumpkins. Others skewed toward larger bin count classes. …

The Effect Of Phosphate Fertilizer And Organic Matter On Phosphorus Status, Ph, And Cabbage Yield In Andisols, Mahfud Arifin, Emma Trinurani Sofyan, Anni Yuniarti, Rina Devnita, Sastrika Anindita

Jurnal Kultivasi

Andisols are characterized by high phosphorus (P) retention, which often limits P availability for crops. This study aimed to analyze the independent and interactive effects of P fertilizer and organic matter (i.e. manure and rice straw compost) on P retention, total P, available P, P uptake, soil pH, and cabbage yield. This research was conducted in pot experiments in plastic house, applying P fertilizer (0, 90, 180, 270 kg ha-1) and organic matter (20 kg ha-1 of chicken, sheep, cow manures and rice straw compost) on Andisols planted with cabbage. The experiment used a factorial randomized design. The results showed …

Fruit Characteristics Of F1 Nil Sletr1-2 Vary With Parental Background, Imas Mintarsih, Anne Nuraini, Farida, Erni Suminar, Rika Meliansyah, Syariful Mubarok

Jurnal Kultivasi

The Sletr1-2 allele, which reduces ethylene sensitivity in tomatoes, offers a promising approach to extending fruit shelf life by slowing ripening-related metabolism. However, the trait’s success depends on compatibility with the recipient cultivar’s genetic background. This study evaluated fruit characteristics of F1 near-isogenic line (NIL) hybrids carrying Sletr1-2 in the commercial backgrounds ‘Costoluto’, ‘Oxheart’, and ‘Sart Roloise’. The field trial was carried out between May and August 2024 at the Experimental Station of Universitas Padjadjaran, Sumedang, Indonesia, following a randomized complete block design with eight biological replicates for each treatment. The results revealed that fruit characteristics of F1 NIL Sletr1-2 …

The Effects Of Nanobubble Fertigation And Soil Conditioners To Improve Nutrient Dynamics, Soil Microbial Activity, And Chili Productivity, Betty Natalie Fitriatin, Euis Ahah Rokayah, Elsa Naila Elmyra, Tualar Simarmata, Nicky Oktav Fauziah, Hanif Fakhrurroja

Jurnal Kultivasi

Drip fertigation is a fertilization method that integrates nutrient delivery with an irrigation system, which is capable of optimizing the direct delivery of nutrients to the root zone. This experiment aims to investigate the effect of drip fertigation with nanobubble technology, and soil conditioners on the population of Phosphate-Solubilizing Bacteria (PSB) and Azotobacter spp., available phosphorus, total nitrogen, growth, and yield of red chili. The study used a Strip Plot Design with two factors and three replications. The first factor was nutrient application (solid NPK fertilizing as control; drip fertigation; and drip fertigation with nanobubble technology), and the second factor …

Comparative Analysis Of Color, Texture, And Water Content In Three Shallot Cultivars At Different Harvest Ages, Rahma Wati Lestari, Kusumiyati, Syariful Mubarok

Jurnal Kultivasi

Shallots are a major horticultural commodity with high economic value. The quality of shallots is determined not only by the quantity of the harvest but also by physical characteristics such as bulb color, texture, and water content. This study aims to evaluate the differences in these physical parameters in three popular local cultivars: Brebes, Sumenep, and Tuktuk, harvested at 56, 63, and 70 days after planting (DAP), respectively. This research uses a Randomized Block Design consisting of 9 treatment combinations and analyzed using the SmartstatXL application. Color measurements are conducted using the CIELAB method and converted to CIELCH and RGB …

Investigating Nutrient Management & The Impacts Of Nitrogen On Blackberries Across Arkansas And The Southeast, Amanda Michelle Lay-Walters

Graduate Theses and Dissertations

Current blackberry (Rubus subgenus Rubus) research on nutrient needs, monitoring practices, and dynamics in the United States has primarily been conducted on cultivars popularly grown in the Pacific Northwest. Thus, regional research is required to understand the needs of blackberry cultivars grown in the southeastern U.S., with southeastern U.S. production practices. In 2022 and 2023, 12 cultivars of blackberry, across seven states, were leaf tissue sampled across multiple phenological stages for nutrient analysis. In Clarksville, AR from 2022 to 2024, six rates of N were applied to established ‘Ouachita’ blackberry plants. During the trial, plant yield, post-harvest fruit quality, fruit …

Patch Mow Grazing: Investigating The Effects Of Mowing On Forage Nutritive Value, The Biomass–Nutritive Value Relationship, And Herbivore Selection, Trace R. Stauble

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbivore foraging behavior plays a critical role in shaping grassland structural heterogeneity, with selection often driven by forage biomass and nutritive value. Currently, it is thought that herbivores primarily select areas that are greater in nutritive value, and low in biomass. More specifically, disturbances like fire and grazing have been thoroughly studied showing that recently burned and grazed areas are not only higher in nutritive value but disproportionately selected by herbivores in comparison to undisturbed areas. However, most studies address only narrow ranges of defoliation, comparing intensely defoliated sites (< 10 cm) to those that are either not defoliated or have experienced a much longer time since defoliation, thereby decreasing grazing pressure as biomass increases. However, one of the most widely used methods of defoliation in grasslands, mowing, hasn’t been thoroughly studied for its effects on nutritive value, and how it impacts herbivore selection. Our study aimed to (1) evaluate how mowing treatments—i.e., short (5 cm), medium (18 cm), and tall (>30 cm, unmown)—affect nutritive value and herbivore selection, (2) assess …

Cover Crop Influence On Arthropod Biodiversity And Soil–Water Dynamics In A Semi-Arid Maize–Soybean Sequence Of The Nebraska High Plains, Carlos Eduardo De Oliveira Martins

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

With the expansion of cover crop (CC) use in semi-arid regions, producers in the Nebraska High Plains are increasingly interested in understanding how CCs influence both beneficial arthropods and soil-water within maize-soybean (Zea mays L., Glycine max [L.] Merr.) rotations. Integrating CCs in these systems can enhance soil water availability and beneficial insect activity, but potential trade-offs include higher early-season water use by CCs and the risk of increasing potential pest populations. This thesis addresses these questions through two complementary studies conducted under field conditions near Brule, Nebraska. The first study evaluated the effects of a multi-species CC mixture …

Post-Fire Soil Health Assessment Of The Grasslands And Woodlands In The Semi-Arid Nebraska Sandhills, Stephanie M. Lugo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Grasslands in the Nebraska Sandhills are shaped by natural wildfires, which help maintain the structure and function of native grasslands. In recent decades, afforestation with ponderosa pine and eastern redcedar has introduced new woodlands that altered the region’s fire dynamics and raised important questions about the effects of wildfire on different vegetation types. As wildfires become more frequent, understanding their impacts on soil health in grasslands and woodlands becomes increasingly important. This study examines the short-term effects of the 2022 Bovee Fire on physical, chemical, and biological soil properties in native grasslands and ponderosa pine and eastern redcedar afforested woodlands. …

Validation Of Diagnostic Markers And Linkage Mapping In Vitis × Muscadinia Hybrids, Isabella Vaughn

Graduate Theses and Dissertations

The Vitis genus comprises two subgenera, Vitis (2n = 38) and Muscadinia (2n = 40), both cultivated for wine, juice, and fresh-market fruit. Vitis vinifera cultivars produce high-quality fruit but are highly susceptible to diseases endemic to the southeastern United States, while muscadines (Muscadinia rotundifolia) provide exceptional disease resistance, heat tolerance, and environmental adaptability. Hybridizing these subgenera offers a path to combine fruit quality with disease resistance; however, wide Vitis × Muscadinia (V × M) crosses remain difficult due to differences in chromosome number, genetic divergence, and reproductive barriers that reduce fertility and recombination. Recent breeding efforts have introgressed stenospermocarpic …

Evaluating Metamitron Efficacy For Glyphosate-Resistant Palmer Amaranth (Amaranthus Palmeri) Management In Sugarbeet Across The Central High Plains, Abraham Akuoko

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Herbicide-resistant (HR) Palmer amaranth (Amaranthus palmeri S. Watson) is regarded as one of the most prominent weeds within sugarbeet fields across the Central High Plains, with limited chemical control options. Although a few herbicides are available, their use is restrictive due to crop injury concerns and can only be applied at or after the 2–4 true leaf (TL) growth stage, which will provide no control for already emerged weeds. However, Palmer amaranth often emerges between sugarbeet planting and the 2 TL sugarbeet growth stage. Consequently, as of 2023, there were no herbicide options to control Palmer amaranth in sugarbeet …

Assessing Native Tallgrass Prairie Species As Main Roadside Vegetation In Arkansas, Sarah Paschal

Graduate Theses and Dissertations

Tallgrass prairies are among the most endangered ecosystems in North America, with Arkansas having lost over 99% of its native grasslands. This research evaluated the potential for using native tallgrass prairie species in Arkansas roadside vegetation. Two field experiments were conducted from 2022 to 2024. The first assessed seven native seed mixtures at three roadside locations (Clarksville, Huntsville, and Newport). Seed mixture composition significantly influenced establishment outcomes, with early-establishing forbs such as black-eyed Susan, partridge pea, and Illinois bundleflower performing well, though establishment varied by location. A second trial compared planting date (Autumn, Winter, Spring) and planting method (broadcast, drill …