Botany Commons^™

Preliminary Vascular Plant Checklist Of The City Of Chattanooga, Matthew J. Scott

Honors Theses

The City of Chattanooga, Tennessee was designated as a National Park City in April 2025 by the National Park City Foundation. Yet, there has not been a comprehensive vascular flora compiled for the city, though there have been extensive collections and observations made of the plant biodiversity in the area from the late 1800s onward. The goal of this project was to examine both the existing herbarium collections and public observation records from iNaturalist to compile a preliminary vascular plant checklist for Chattanooga, and to include conservation and ecological data for the species currently documented to provide a holistic review …

Leveraging Historic Collections: Investigating Morphometric Differentiation In Members Of The Arisaema Triphyllum (L.) Schott (Araceae) Species Complex, Morgan Bradley Russell

Graduate Theses and Dissertations

The Jack-in-the-pulpit (Arisaema triphyllum (L.) Schott) is an herbaceous perennial herb of North America, and its taxonomic history is full of confusion and rank shifts. Now split into six species, the A. triphyllum species complex consists of morphologically similar taxa that have differing ploidy levels. In Chapter I, I compiled a detailed introduction and history for these taxa, focusing on their taxonomic complexity and morphological ambiguity in herbarium specimens and immature plants. I also presented their ploidy distinctions and how the implications of polyploidy may hold answers to parsing them apart, especially in dried herbarium specimens where defining characteristics are …

Discerning Patterns Of Floral Sugar-Feeding: Dynamics Of The Mosquito Culex Antillummagnorum In Puerto Rico, Ella J. Branham

Master's Theses

Mosquitoes rely on sugar feeding for survival, primarily from flowering plants, yet mosquito–plant interactions remain understudied. I examined plant-feeding associations of the mosquito Culex antillummagnorum in the Luquillo Experimental Forest of Puerto Rico, which may clarify patterns of habitat use, disease dynamics, and broader species interactions. First, plant DNA was extracted from field-collected Cx. antillummagnorum to identify potential nectar sources. DNA barcoding produced positive matches to the flowering plant genera Billia, Aesculus, Cladium, Fimbristylis, Xyris, Cakile, and Habenaria. Habenaria was the most compelling result because it belongs to the same subtribe of orchids …

Effects Of Applying Humic Acid In-Furrow At Potato Planting, Jonathan Tyler Price

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Many products are marketed towards potato farmers that purport to have a positive return on investment for yield and quality. Humic acids, which are comprised of long chained, organic molecules that can be naturally or industrially made, are currently being marketed in this way. The use of these materials is reported to improve nutrient uptake, increase soil health, encourage vigorous growth, and most importantly, increase yields.  From 2023-2025, the in-furrow application of humic acid containing commercial products was evaluated in Pennsylvania on the cultivars ‘Lehigh’ and ‘Waneta’. Black Label Zn, Duo Maxx, Fertiactyl RhiZn, Humi-flex FA, Hydra-Hume, and Monty's Liquid …

Arkansas Soybean Research Studies 2024, Jeremy Ross

Arkansas Agricultural Experiment Station Research Series

The 2024 Arkansas Soybean Research Studies includes research reports on topics pertaining to soybean across several disciplines from breeding to post-harvest processing. Research reports contained in this publication may represent preliminary or only data from a single year or limited results; therefore, these results should not be used as a basis for long-term recommendations. Several research reports in this publication will appear in other University of Arkansas Division of Agriculture’s Arkansas Agricultural Experiment Station publications. This duplication is the result of the overlap in research coverage between disciplines and our effort to inform Arkansas soybean producers of the research being …

Dendroclimatic Response Of The Wet Miombo Woodland Species: A Case Study Of Mufulira District, Copperbelt Province, Zambia, Collins Chibuye Malubeni

All-Inclusive List of Electronic Theses and Dissertations

Zambia is a tropical, landlocked country that lies in the South-Central part of Africa. The climate in Zambia includes distinct dry and rainy seasons, mainly influenced by the north-south movement of the Intertropical Convergence Zone (ITCZ), which shifts seasonally. This research is focused on understanding the relationship between tree growth and climate using dendrochronology. Forty-nine tropical species, including Julbernardia paniculata, Brachystegia longifolia, and Pericopsis angolensis, were analysed for dendroclimatic potential, and 70% showed clear ring formation, indicating that trees in this locality produce distinct annual ring boundaries. For the single species chronology, thirteen cores from eight trees that were initially …

Impact Of Pvc Microplastics On The Growth Of Raphanus Sativus, Olivia Fawkes, Alissia D. Fulton, Darlene Panvini

SPARK Symposium Presentations

Microplastics have emerged as a growing concern due to their increasing prevalence in terrestrial ecosystems. Understanding how microplastics affect plant growth is crucial for the agricultural industry, as crop productivity and soil quality have a direct impact on food security and farm sustainability. This study examined the impact of polyvinyl chloride (PVC) microplastics on the germination and growth rate of Raphanus sativus. Seeds were grown for six weeks in a controlled growth chamber in petri plates and soil pots containing varying concentrations of PVC microplastics (0, 25, 50, 75, 100 mg/L), including untreated PVC and PVC artificially weathered through …

Potential Applications Of Thymus Vulgaris In Dental Care: A Review Of Antimicrobial And Oral Health Benefits, Lakenzia Z. Ham

Undergraduate Research Conference

This research proposal focuses on how common thyme (Thymus vulgaris) can be used in dental care. There has been more interest in natural products for dental health because some common dental treatments can have side effects or lead to antibiotic resistance. Thyme contains natural compounds like thymol and carvacrol that help kill bacteria, reduce inflammation, and prevent buildup on teeth.

The purpose of this study is to investigate the current scientific literature to see the effectiveness of thyme in preventing common oral health problems like cavities, gum disease, and bad breath. Research shows that thyme can fight bacteria …

From Garden To Laboratory: The Scientific Significance Of Zinnia Elegans, Katelyn G. Klark

Undergraduate Research Conference

Zinnia elegans is a flowering species in the Asteraceae family that originated in Mexico and eventually spread to Europe (Burlec et al., 2019). This species' vast array of colors, drought resistance, and other agricultural benefits make this plant highly sought after in gardens worldwide (Burlec et al., 2019). However, following the methodology of a preliminary research literature review, recent scientific research suggests that Z. elegans may possess significance beyond its aesthetic appeal. This literature review aimed to examine recent scientific findings regarding zinnias and their potential agricultural, medicinal, and genetic applications. To explore these possibilities, recent scientific studies were examined …

Comparing The Effect Of Varying Concentrations Of Polytetrafluoroethylene On The Length And Fresh Weight Of Salvinia Minima, Talha Islam

Caroliniana Undergraduate Research Journal

The increasing usage of fluoropolymer pollution in aquatic environments has increased concerns about the ecological consequences of materials such as polytetrafluoroethylene (PTFE), commonly known as Teflon. In the past decade, the usage of Teflon in American homes across the United States has risen by 37.7%, resulting in large amounts of aquatic pollution due to improper disposal of these harmful substances (Török et al., 2020). Although PTFE is chemically inert, its accumulation in freshwater systems can introduce matter that physically interacts with aquatic organisms. This study examined how varying concentrations of PTFE suspensions affect the growth of Salvinia minima, a …

Pleistocene Glacial Effects On North American Phylogeographic Patterns, Noah Garland, Ingrid Jordon-Thaden

Scholars Week

The biodiversity of alpine ecosystems are grossly underestimated, in turn threatening habitat loss. Much work is needed in this respect to better understand the process of speciation and extinction in these environments, given the threat of global climate change. We are testing hypothesis regarding rapid radiation of plant lineages both into and out of refugia in the context of dispersal during post-glacial and inter-glacial periods, focusing on the phylogeny of trans-Beringian alpine plant species by observing circumpolar lineages extending into southern portions of the North American Cordillera, the Rocky Mountains and the Intermountain Region.  Focal taxa include species of Draba …

Testing The Intermediate Disturbance Hypothesis On Anthropogenic Pressure In Central Alabama, Gavin Terrell

Theses

Biodiversity is fundamental to maintaining ecosystem structure and function globally. Prior to the late 20th century, ecological theory generally predicted that biodiversity would be highest in systems experiencing minimal disturbance. However, Joseph H. Connell challenged this view with the Intermediate Disturbance Hypothesis (IDH), which posits that species diversity peaks at intermediate levels of disturbance and declines under conditions of both low and high disturbance. Although widely cited, the applicability of the IDH to natural systems remains debated, particularly in the context of anthropogenic disturbances and when diversity is measured beyond species richness alone.

This study evaluated the predictions of the …

Arkansas Cotton Variety Tests 2025, F. Bourland, J. Gann, B. Lovelady, B. Guest Jr, J. Mcalee, L. Martin, Z. Treadway, C. Henderson

Arkansas Agricultural Experiment Station Research Series

The primary goal of the Arkansas Cotton Variety Tests is to provide unbiased data regarding the agronomic performance of cotton varieties and advanced breeding lines in the major cotton-growing areas of Arkansas. This information helps seed companies establish marketing strategies and assists producers in choosing varieties to plant. These annual evaluations will then facilitate the inclusion of new, improved genetic material in Arkansas cotton production. Adaptation of varieties is determined by evaluating the lines at five University of Arkansas Division of Agriculture research sites (Manila, Keiser, Judd Hill, Marianna, and Rohwer). The tests at Rohwer were abandoned due to undefined …

Comparative Antiscabies Efficacy Of Sonneratia Alba Extracts: Evaluation Of Plant Parts And Concentrations In Mice, Delima Engga Maretha, Lara Mukti Taresha, Karina Yuliana, Iis Ariska, Silvia Diah Lestari

Makara Journal of Science

This study evaluated the antiscabies efficacy of 70% ethanol extracts from various parts of the mangrove Sonneratia alba (leaves, flowers, bark, and roots) as a potential alternative therapy. The primary objective was to compare the healing effects of the extracts at different concentrations on scabies lesions in mice (Mus musculus). Using a completely randomized design, 24 male Swiss Webster mice were assigned to four groups: a control (K0) group and three treatment groups to receive 10% (K1), 20% (K2), and 30% (K3) extract concentrations topically twice daily. The results demonstrated that the S. alba extracts had significant effects …

Liparis Condylobulbon Reichb. F. From Gumitir, Indonesia: Morphology, Molecular, And Phytochemical Profile, Fuad Bahrul Ulum, Asyifa Yasmin Arum, Kurnia Sa’Adah, Dwi Setyati, Edia Fitria Dwinianti, Ranjithkumar Rajamani, Ari Satia Nugraha, Mukhamad Su’Udi

Makara Journal of Science

Liparis condylobulbon Rchb.f. is an epiphytic orchid across South and Southeast Asia, which holds notable ethnomedicinal and pharmacological significance. This study aims to characterize Indonesian Liparis condylobulbon using integrated morphological, molecular (matK, rbcL, ITS2), and phytochemical (LC-MS, DPPH) analyses of specimens from Mount Gumitir, providing the first comprehensive taxonomic and pharmacological profile to support species authentication and future bioprospecting. The L. condylobulbon specimen displays diagnostic epiphytic morpho-logy, including fusiform pseudobulbs, two elongate leaves, and an erect inflorescence bearing ~123 flowers. Molecular barcoding using matK, rbcL, and ITS2 confirmed its identity, with phylogenetic analyses consistently clustering it with …

Genome Wide Association Study (Gwas) On Different Economic Traits And Epigenetic Stability Of Sweetpotato In Louisiana, Ajay Dhungana

LSU Doctoral Dissertations

Sweetpotato [Ipomoea batatas (L.) Lam] is a globally important food, feed, and industrial crop, yet its improvement is constrained by a complex hexaploid genome, clonal propagation, and susceptibility to multiple diseases. In Louisiana, production is threatened primarily by Fusarium oxysporum f. sp. batatas (Fusarium wilt) and Ceratocystis fimbriata (Black rot). Furthermore, the in vitro propagation methods essential for disease-free planting material and germplasm conservation can introduce epigenetic instability that undermines clonal fidelity. This dissertation integrates genome-wide association studies (GWAS), genotype by environment interaction (GEI) and DNA methylation profiling to dissect resistance mechanisms and assess epigenetic stability in Louisiana sweetpotato …

Artificial Intelligence In Mycology: A Systematic Review Of Species Identification, Biotechnological Assessment, And Explainable Deep Learning Methods, Fati̇h Eki̇nci̇, Mehmet Serdar Güzel, Ilgaz Akata

Turkish Journal of Botany

This review offers a comprehensive analysis of the expanding role of artificial intelligence (AI) in mycological research. It highlights how AI supports the identification of fungal taxa at both microscopic and macroscopic levels, facilitates the detection of toxic species, contributes to ecological mapping, aids in discovering new fungal bioproducts, and enhances precision agriculture practices. Advanced techniques such as convolutional neural networks, you only look once, U-shaped network (UNet), and residual network have demonstrated strong performance in classification, segmentation, and object detection tasks. Additionally, explainable AI (XAI) methods like gradient-weighted class activation mapping (Grad-CAM), local interpretable model-agnostic explanations (LIME), and SHapley …

Global Transcriptomic Insights Into Nla-Dependent Boron Toxicity Responses In Arabidopsis Thaliana, Doğa Seli̇n Kayihan

Turkish Journal of Botany

Boron (B) toxicity disrupts multiple metabolic and signaling processes in plants, yet its interaction with post-translational regulators remains poorly understood. The E3 ubiquitin ligase NITROGEN LIMITATION ADAPTATION (NLA) is known to control nutrient transporter turnover, but its role in B toxicity responses has not been previously characterized. Here, we present the first genome-wide transcriptomic analysis of nla mutant Arabidopsis thaliana exposed to mild (1 mM) and moderate (2 mM) B toxicity. Loss of NLA caused a profound reprogramming of gene expression, marked by constitutive activation of ribosome- and translation-related pathways and strong repression of MAPK signaling, α-linolenic acid metabolism, and …

Ethnobotanical Study Of Medicinal Plants Used By The Local Population In And Around Kozak Plateau (Bergama, İzmir, Türkiye), Şükrü Arasan, Hasan Yildirim

Turkish Journal of Botany

This research was conducted between 2020 and 2022 in 21 villages located on the Kozak Plateau and its surroundings, in the Bergama district of İzmir province, Türkiye. The main aim of the study is to document the medicinal uses of plants by the local population and to contribute to the preservation and transmission of ethnobotanical knowledge—passed down through generations— to future generations before it disappears. Interviews were conducted with 159 informants, and the traditional medicinal uses of 126 plant taxa belonging to 54 families were identified. Among these, the therapeutic uses of 37 taxa were recorded for the first time. …

Determination Of High-Temperature Stress Tolerance In Strawberry Varieties Based On Physiological And Biochemical Mechanisms, Izhar Ullah, Hüsnü Demi̇rsoy, Musa Kavas, Kubi̇lay Yildirim, Leyla Demi̇rsoy

Turkish Journal of Botany

Rising global temperatures due to climate change threaten optimal strawberry growth and sustainable yields. Limited data exist on the physiological and biochemical responses of strawberry cultivars to high-temperature stress and their tolerance mechanisms. T his study evaluated the responses of 21 day-neutral and short-day strawberry cultivars to high-temperature stress and classified their tolerance levels using a novel weighted rating method. Plants were grown in 15-cm plastic pots (3:1:1 garden soil, peat, perlite) under open-field conditions until the 3–4 leaf stage and then transferred to climate chambers. After acclimatization at 25/15 °C (day/night) for 2 weeks, the plants were subjected to …