Agricultural Science Commons^™

Multi-Locas Gwas Mapping And Candidate Gene Analysis Of Anticancer Peptide Lunasin In Soybean (Glycine Max L. Merr), Rikki Locklear, Jennifer Kusumah, Layla Rashad, Felicia Lugaro, Sonia Viera, Nathan Kipyego, Faith Kipkosgei, Daisy Jerop, Shirley Jacquet, Mythy Addelmajid Kassem, Jiazheng Yuan, Elvira De Mejia, Rouf Mian

Biological Sciences Faculty Publications

Soybean (Glycine max) peptide lunasin exhibits significant cancer-preventive, antioxidant, and hypocholesterolemic effects. This study aimed to identify quantitative trait nucleotides (QTNs) associated with lunasin content and to annotate the candidate genes in the soybean genome. The mapping panel of 144 accessions was gathered from the USDA Soybean Germplasm Collection, encompassing diverse geographical origins and genetic backgrounds, and was genotyped using SoySNP50K iSelect Beadchips. The lunasin content in soybean seeds was measured using the enzyme-linked immunosorbent assay (ELISA) method, with lipid-adjusted soybean flour prepared from seeds obtained from the Germplasm Resource Information Network (GRIN) of USDA-ARS in 2003 and …

Quantification Of Auxin-Cytokinin Response During Primary Root And Lateral Root Development In Common Bean, Gurdeep Singh

Electronic Theses and Dissertations

Roots support water and nutrient uptake, anchorage, and soil interactions through continuous growth at the primary root tip (PRT). In common bean (Phaseolus vulgaris), new cells are produced in an open root apical meristem and subsequently elongate in the elongation zone, and together these processes drive root tip progression through the soil. Lateral roots (LRs) arise in the differentiation zone, where pairs of pericycle founder cells dedifferentiate, divide asymmetrically, and form lateral root primordia (LRP) that pass through defined developmental stages before emergence. Auxin and cytokinin (CK) are central regulators of both primary root growth and LR development, yet their …

Role Of Chemotype In Aggressiveness, Toxicity, And Competitive-Ness Of Fusarium Graminearum On Wheat, Simran Goyal

Theses and Dissertations--Plant Pathology

Fusarium Head Blight (FHB) of wheat, caused by the fungus Fusarium graminearum, is a devastating disease that led to epidemics in the U.S. during the 1990s, resulting in economic losses exceeding $2.6 billion. Typical symptoms include bleached spikelets and shriveled grains, often contaminated with trichothecene mycotoxins that make them unsafe for food or feed. FHB severity and mycotoxin production are influenced by a complex interplay between host genotype, environmental factors, and pathogen genotype. Integrated management practices that include the use of more resistant cultivars, crop rotation, and fungicide applications help to reduce disease incidence and severity. Disease forecasting models …

Selective Lure For Bactrocera Dorsalis Based On Shared Palpal And Antennal Responses Across Three Economically Important Tephritid Species, Tibebe Dejene Biasazin, Raphael Njurai Miano, Xavier Cheseto, Shepard Ndlela, Samira A. Mohamed, Teun Dekker

All Peer-Reviewed Publications

The oriental fruit fly Bactrocera dorsalis is a highly destructive and invasive pest that threatens global horticulture, causing economic losses due to fruit damage and quarantine regulations. While attract-and-kill baits are widely used to suppress fly populations, these baits also impact many non-target species. To achieve ecological sustainability, our study aimed to develop a method that selectively targets female fruit flies. Using gas chromatography coupled to electro-antennal or palpal detection (GC-EAD/GC-EPD), we identified compounds that elicited responses in the maxillary palp and antenna of three different fruit flies including B. dorsalis, Ceratitis capitata, and Zeugodacus cucurbitae. As previous studies indicated …

Research Report: Cold-Hardy Hydrangeas For Landscape And Cut Flowers, Rebecca G. Sideman, Kaitlyn Orde, Ella Lukacz, Cathy Neal

Faculty Publications

This research report describes the performance of several cold-hard “panicle” (H. paniculata), “smooth” (H. arborescens), and “oakleaf” (H. quercifolia) hydrangea as landscape plants and for cut flower production in Durham, NH. We established a replicated planting of sixteen newer hydrangea cultivars at Woodman Farm in summer 2020. Preliminary data from these young shrubs indicates that there are wide differences in flower production, stem quality, flowering time and duration, and postharvest floral quality – among other traits.

Introduction To Hydroponics- 2025-2026 Workshop Handbook, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Hydroponically grown plants grow faster than traditional production systems, with greater productivity, greater palatability, and having optimal visual character. Three principal components of a system include the plant support platform, a nutrient solution reservoir, and an interface for the root-solution. This publication provides in-depth explanation to system design, evaluation of water quality, nutrient formulation, and prototype systems that can be easily constructed for those wanting to explore hydroponics, such as educators, organizational leaders, or home enthusiasts.

Generational Exposures To Cerium Oxide Nanoparticles And Perfluorooctanesulfonic Acid Affect The Performance Of Daughter Plants, Preston Clubb

Graduate Theses/Dissertations

The effects of parental stress on the performance of next generation exposed to another contaminant were investigated. Wheat was exposed to cerium oxide nanoparticles (CeO2-NPs) in first and second generations and exposed to perfluorooctanesulfonic acid (PFOS) in the third generation. Phenotypic or metabolic responses were assessed at 21-day (short-term exposure) or 90-day (long-term exposure) exposure periods. Biomass production, chlorophyll content, enzyme activity, and membrane damage were measured at short-term exposure, while elemental and PFOS concentrations, and grain metabolites were analyzed in long-term exposure. Results showed that continued exposures to CeO2-NPs and PFOS enhanced chlorophyll content but reduced concentrations of important …

An Economic And Production Analysis Of Seaweed Farms In California And The Pacific Northwest, Brian Donovan

Cal Poly Humboldt theses and projects

Since the early 2010s, the seaweed aquaculture industry has steadily expanded in the United States, with states like Alaska, Maine, Hawaii, and Connecticut leading the way in the development of this emerging sector. However, information gaps remain concerning certain aspects of the domestic seaweed aquaculture industry. The purpose of this study was to examine the status of the seaweed aquaculture industry along the West Coast of the United States; specifically in the states of California, Oregon, and Washington. Seaweed farmers in these states were invited to voluntarily complete surveys asking important production, economic, and commercial questions regarding their operations. Data …

Raman Spectroscopy For Rapid Quantification Of Macronutrients In Heirloom Beans, K. Chandler Williams

Graduate Theses, Dissertations, and Problem Reports (ETD)

Quantification of macronutrients in food requires a large investment in facilities and instrumentation as well as ongoing expenses of labor, reagents, and hazardous waste disposal. These costs pose a significant barrier to determining macronutrient quantities in the thousands of uncharacterized landrace and heirloom crops and discourage traditional crop breeding projects from ensuring that their selected crops maintain desirable macronutrient profiles in addition to target agronomic traits. Our objective was to test whether a hand-held Raman spectrometer—a technology which has found use in plant disease diagnostics but remains largely overlooked in nutrient quantification-- could provide a feasible means for quantifying the …

Effects Of Round-Up On The Environment, Sandra J. Marcu

Journal of Earth and Life Science

Many people around the world have used and still currently use Roundup but are unaware of the effects it has on the environment. Roundup is a spray on application weedkiller that is widely used around the world today both residentially and commercially. It enables its user to grow a garden or a field of crops with a no-tilling approach to eliminate weeds. It is a well-known and popular choice for killing weeds that has been around since the mid 1970’s (Oca, 2017). John Franz, a Monsanto scientist discovered that glyphosate (main ingredient in Roundup) was an herbicide or weedkiller, and …

Modeling The Impact Of Climate Change On Plant Hardiness Zones Across The Contiguous United States Using Empirical Bayesian Kriging Regression Prediction, Daniel Donkor

Graduate Theses/Dissertations

Mapping plant hardiness zones is crucial to understanding and predicting the spatial distribution of plants in response to climatic conditions. The United States Department of Agriculture (USDA) developed the plant hardiness zones based on the average of annual extreme minimum temperatures using the Parameter elevation Regression on Independent Slope Model (PRISM). While the USDA’s 2012 and 2023 Plant Hardiness Zone maps remain standard references, they offer limited geostatistical transparency that causes more complications in replicating. This study applies Empirical Bayesian Kriging Regression Prediction (EBKRP) method to generate Plant Hardiness Zone maps, analyze spatial and temporal shifts in the plant hardiness …

In-Season Nitrogen Mmanagement: Leveraging Data Visualization For Precision Agriculture, Chathurika Harshani Narayana

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Effective nitrogen management is vital for sustainable agriculture, impacting both crop yield and environmental health. Traditional methods often use fixed application rates set before planting, which do not adapt to changing crop needs during the season. This can lead to over- or under-application, reducing efficiency and sustainability. While modern tools like sensors, satellites, and UAVs provide valuable real-time data on crop and field conditions, integrating and using this data to guide timely nitrogen decisions remains a major challenge. In-season nitrogen management offers a solution by allowing for dynamic adjustments to nitrogen applications, addressing crop needs as they arise. This approach …

Characterizing Agroecosystem Effects Of Industrial Hemp On A Rotational Row Cropping System And Microbial Communities, Kent D. Pham

Theses and Dissertations--Plant and Soil Sciences

The implementation of crop rotation on a farm can have many benefits for agroecosystem health and production. This practice can potentially reduce nutrient amendments, disrupt pest and disease cycles, and increase crop yields. In Kentucky, one common rotation consists of either corn or soybean grown the first year, followed by the other crop, repeated every two years. Industrial hemp, grown for fiber or grain, is an emerging crop that has shown promise as a rotation alternative, although not much is known about its effects on soil health, agroecosystem functioning, and microbial communities. To better characterize hemp’s role within American agriculture, …

Factors Impacting Germination, Emergence, And Establishment Of Direct Seeded And Transplanted Hemp (Cannabis Sativa L.), Paul Cockson Dr.

Theses and Dissertations--Plant and Soil Sciences

Industrial hemp (IH) establishment has many challenges including: poor emergence, low stand establishment, and variable plant development in direct seeded hemp. In floral hemp production, quality transplant production is a challenge with seedlings often becoming root bound and etiolated. In both direct seeded and transplant hemp, the relationship between root vigor and vegetative growth has not been studied and may prove insightful for managing emergence and establishment challenges. The goals of this study were three-fold: 1) to measure and describe root system architecture (RSA) and root phenotypes observed in selected IH cultivars especially in regard to identifying agronomically important RSA …

Evaluation Of Poaceae Species And Suppression Application Methods For Perennial Groundcover In Corn, Hallie A. Sandeen

Theses and Dissertations--Plant and Soil Sciences

Intensive grain production aims to provide food security but has depleted once-perennialized land. Perennial groundcover (PGC) offers ecosystem services to intensive annual corn (Zea mays L.) production. In past research conducted in the U.S. Midwest, Kentucky bluegrass (Poa pratensis L.) has been the standard PGC species. However, it is slow growing and difficult to suppress. To characterize the PGC system in the midsouth, two separate field trials in Lexington, Kentucky, were conducted to (i) compare the first-year establishment of alternative cool-season species to Kentucky bluegrass, with and without a spring-applied broadleaf herbicide, and their impact on corn grain …

Greenhouse Management For The Smaller Structure--Educational And Hobby, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Greenhouses used for teaching or by hobbyist are smaller than those used for commercial production or found in the retail environment. Structural materials, covering, mechanical equipment, and control systems often are packaged as a kit made available through greenhouse suppliers. Supplier construction services may not be available, in which buyers must use local contractors to complete the installation. Greenhouses are unique structures that differ greatly from sheds or other outbuildings. They have coverings that allow maximum light transmittance, protected from UV degradation, and can handle wide inside to outside temperature extremes. This extension circular provides valuable information on the character, …

Addressing Food Security In Cameroon, Stacy A. Adams, Ruth Abunaw Besong

Department of Agronomy and Horticulture: Faculty Publications

Cameroon Africa has experience a period of nearly a decade of unrest as militants fight for independence for two Anglophone regions within a predominantly Francophone country. The English-speaking minority have felt aggrieved for continued erosion of rights by the central government. Protests have rapidly spread since 2016, causing closure of schools, businesses, and medical facilities. People have lost homes and been displaced, negatively affecting food production and crop availability. The United States Department of State leads an effort of diplomacy beyond emergency food relief through the Mandela Washington Fellowship that connects American professionals to innovative and impactful young African leaders. …

Terrarium- An Ecosystem In A Jar, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

STEM education is supported through hand's-on activities in the classroom. Content understanding and reaffirmation of knowledge is supported through this informative STEM-Quick card that teachers or extension educators can distribute to participants for reference. Terrariums provide an example of a closed ecosystem where water and carbon cycling is demonstrated and plant growth can be observed. This card presents the steps to building and caring for an easy to create terrarium.

Revolutionizing Grapevine Breeding Programs: A Mobile Genome Editing System For Perennial Crops, Bridget Bolt

Theses and Dissertations--Plant and Soil Sciences

Grapevine (Vitis vinifera) faces unprecedented challenges from climate change, with up to 90% of current growing regions potentially becoming unsuitable for production within decades. Traditional breeding approaches require 25-30 years for variety development, creating a time constraint incompatible with the pace of environmental change. This research establishes the approach for a novel mobile RNA-based gene editing platform that addresses longstanding bottlenecks in grapevine improvement while preserving cultivar identity and reducing breeding timelines.

This research developed a three-component system for transgene-free gene editing in grapevine. First, a mobile CRISPR/Cas9 system was established using Agrobacterium rhizogenes transformation and the cut-and-dip …

Optimization Of Transformation And Regeneration In The Sunflower (Helianthus Annuus), Sara M. Kilar

Masters Theses

In addition to their value as prized ornamentals, sunflowers are important crop species due to the nutritional value and high oil content of the seeds. Sunflower oil is a significant contributor to global seed oil production, which can be used as a food additive and cooking agent as well as a raw material for biodiesel production. While traditional breeding efforts have led to the development of many unique cultivars, genetically modified variations have proven more difficult due to the recalcitrance of sunflower plants to genetic transformation. As a result, facile and efficient transformation methods for sunflowers have the potential to …