Other Ecology and Evolutionary Biology Commons^™

Getting To The Root Cause: The Genetic Underpinnings Of Root System Architecture And Rhizodeposition In Sorghum, Farren Smith

Graduate Theses, Dissertations, and Problem Reports (ETD)

Plants are some of the most diverse organisms on earth, consisting of more than 350,000 different species. To understand the underlying processes that contributed to plant diversification, it is fundamental to identify the genetic and genomic components that facilitated various adaptations over evolutionary history. Most studies to date have focused on the underlying controls of above-ground traits such as grain and vegetation; however, little is known about the “hidden half” of plants. Root systems comprise half of the total plant structure and provide vital functions such as anchorage, resource acquisition, and storage of energy reserves. The execution of these key …

Changes In Plant Community Composition, Structure, And Function In Response To Permafrost Thaw, Katherine Standen

Theses and Dissertations (Comprehensive)

Air temperature is increasing at three or more times the global average in high latitudes, causing widespread permafrost thaw across the boreal biome. Since the boreal biome stores 30-40% of global terrestrial carbon (C), of which about 30-45% is found in permafrost soils, this temperature increase could cause a large efflux of C to the atmosphere. Climate warming and permafrost thaw are also expected to alter plant community composition and productivity and, given the link between plant functional traits and ecosystem C fluxes, may alter overall ecosystem function. Across the boreal biome of western Canada, we know surprisingly little about …

Population Structure Of The Lizard Ecpleopus Gaudichaudii Coincides With A Biogeographic Barrier - The Doce River, Alexander J. Garretson

Dissertations and Theses

Intraspecific genetic variation is an integral component of diversification and the accumulation of biodiversity. The degree to which isolated populations of the same species are genetically structured in geographical space is impacted by a variety of mechanisms. In this study, I document patterns and discuss possible drivers of genetic structure within Ecpleopus gaudichaudii, a lizard species endemic to the Atlantic Forest of Brazil. For that, I assembled ddRadseq sequences from 48 individuals across much of the range of the E. gaudichaudii and analyzed its population structure. I created an intraspecific phylogeny for this group utilizing RAxML and conducted a …

In The News, Meredith Purintun, Rosanna M. Vail

Human–Wildlife Interactions

Items in the news.

Landscape Characteristics Predict Locations For Potential Human–Wildlife Interactions With Timber Rattlesnakes In Minnesota, Usa, Ben M. Borash, Benjamin P. Pauli

Human–Wildlife Interactions

While management measures cannot eliminate human–wildlife conflicts, they have the potential to minimize the damage done to both parties, especially if areas where the nature of the potential interaction can be predicted before an encounter occurs. The timber rattlesnake (Crotalus horridus) represents a wildlife species associated with public misconceptions that may foster unwarranted fears and retribution. This species is native to the eastern and southern regions of the United States, including a small population remnant in the southeastern region of Minnesota. To gain a better understanding of the environmental predictors relevant to human–snake encounters in Minnesota (that require …

Diversity, Equity, And Inclusion Efforts In Human–Wildlife Interactions, Rosanna M. Vail

Human–Wildlife Interactions

The managing editor interviews the editor-in-chief about the journal's current efforts and next steps toward increasing diversity, equity, and inclusion.

In Memory: James E. “Jim” Miller, Scott R. Craven

Human–Wildlife Interactions

This "In Memory" article honors the life and contributions of James E. “Jim” Miller.

Interested In Serving As An Associate Editor For Human–Wildlife Interactions?

Human–Wildlife Interactions

This is a call for associate editors for Human-Wildlife Interactions.

Stakeholder Acceptance Of Wild Equid Fertility Control Mirrors Global Shifts In Attitudes To Wildlife Management, Giovanna Massei, Stephanie L. Boyles Griffin

Human–Wildlife Interactions

Wild equid (horses [Equus ferus] and burros [E. asinus]) populations have increased on public lands in the United States since the passage of the Wild Free-Roaming Horses and Burros Act of 1971. As of March 1, 2022, the Bureau of Land Management (BLM) estimated that wild equid populations on designated herd management areas (HMAs) may exceed 82,000 animals. In 2020, the total population of wild equids in the United States was estimated to exceed 300,000 animals. The BLM sets an appropriate management level (AML) for wild horse and burro herds on each HMA and removes animals …

Invasive Earthworms In The Crown Of The Continent System And Implications For Land Management, Meghan Elizabeth Scott

Graduate Student Theses, Dissertations, & Professional Papers

The United States contains invasive earthworms originating from Europe and Asia; the majority are European lumbricids. Direct introduction occurs primarily through human activity and, once established, earthworm populations are difficult to address. When exotic earthworms engage in bioturbation, they negatively alter subterranean food webs and nutrient cycling by disrupting soil layering systems. The most prominent form of physical alteration is the change and removal of the topmost organic layer. This disruption is associated with altered nitrogen and carbon cycling, as well as altered forest floor plant communities.

The Crown of the Continent ecosystem is located in southwestern Alberta, southeastern British …

Applying Conservation Genomic Techniques To Guide Management Of The Reticulated Flatwoods Salamander (Ambystoma Bishopi), Miranda Gaupp

College of Graduate Studies: Theses & Dissertations

The Reticulated flatwoods salamander (Ambystoma bishopi) is a federally endangered amphibian endemic to the longleaf-pine ecosystem of the southeastern U.S. This study used analyses of single-nucleotide polymorphism (SNP) data, collected from 2,255 unique individuals across 5 breeding seasons, spread across the known extant range of A. bishopi, to characterize the genetic diversity and demographics of populations, genetic relationships among populations, and patterns and spatial extents of gene flow, and to evaluate potential effects of management on A. bishopi’s resiliency. Population structure was strongly hierarchical, with individual breeding ponds (n = 38) acting as semi-connected subpopulations …

Impact Of Orthophosphate As A Corrosion Inhibitor And Chloramine Disinfectant On Drinking Water Biofilm Communities, Mitchell Cooke

Theses and Dissertations (Comprehensive)

A drinking water distribution system (DWDS) must maintain conditions within quality standards which assure the effective and safe transport of finished drinking water from treatment plants to the household tap. Although safe to drink, finished water is not sterile, and may contain hundreds of microorganisms in a single milliliter. These microorganisms are present from the source waters, such as lakes, rivers and aquifers, and have passed through early treatment steps. Final treatment steps, such as the maintenance of disinfectant residuals, are used to further minimize viable cells present and focus on the reduction of harmful organisms. Microbial cells entering the …

Epigenetic Buffering In Introduced House Sparrows, M. Ellesse Lauer

College of Graduate Studies: Theses & Dissertations

Epigenetic buffering, as an environmentally induced increase in variance of epigenetic states that increases phenotypic variation to buffer populations against decreased fitness, may be a factor that resolves the genetic paradox of introduced species. DNA methylation is a molecular mechanism that could facilitate epigenetic buffering by changing in response to environmental stress. Therefore, epigenetic buffering can be detected through increased variance in DNA methylation in novel or heterogeneous environments. Introduced house sparrows (Passer domesticus) have well-documented phenotypic changes with low genetic diversity, high epigenetic diversity, and high variance in DNA methylation that provide a characteristic signature of epigenetic buffering. …

Coupled Structure-Function Responses To Disturbance: High Structural Complexity Resistance Supports Primary Production Resistance, Kerstin M. Niedermaier

Theses and Dissertations

The capacity of forests to resist structural change and retain material legacies–the biotic and abiotic resources that persist through disturbance–is crucial to sustaining ecosystem functioning after disturbance. However, the role of forest structure as both a material legacy and feature supporting carbon (C) cycling stability following disturbance has not been widely investigated. We used a large-scale disturbance manipulation to ask whether LiDAR-derived canopy structures as material legacies drive 3-year responses of NPP to a range of disturbance severity levels. As part of the Forest Resilience Threshold Experiment (FoRTE) in northern Michigan, USA we simulated phloem-disrupting disturbances at a range of …

Advancing Forest Structure-Function Relationships: Linking Above- And Belowground Structure To Soil Respiration, Laura J. Hickey

Theses and Dissertations

Variation in the soil-to-atmosphere C flux, or soil respiration (Rs), is influenced by a suite of biotic and abiotic factors, including soil temperature, soil moisture, and root biomass. However, whether canopy structure is tied to soil respiration through its simultaneous influence over these drivers is not known. We assessed relationships between measures of above- and belowground vegetation density and complexity, and evaluated whether Rs is linked to remotely sensed canopy structure through pathways mediated by established biotic and abiotic mechanisms. Our results revealed that, at stand-scale, canopy rugosity–a measure of complexity–and vegetation area index were coupled to soil respiration through …

Developmental Plasticity Of Stress Tolerance And Life-History Strategy To Artificial Light At Night, Alyssa M. Bonfoey

University of the Pacific Theses and Dissertations

Artificial light at night (ALAN), or ecological light pollution, is increasingly prevalent worldwide. Exposure to ALAN tends to negatively impact animals—particularly, nocturnal animals—but life-history strategies may mitigate these costs. Animals in many regions are also increasingly exposed to climate-related stressors, such as heat and drought. Yet, interactions among ALAN, life-history strategy, and stress tolerance are unknown. Therefore, I determined if developmental ALAN exposure (1) affects development, (2) affects adult phenotype, including heat and desiccation tolerance, and (3) affects and/or interacts with life-history strategy. To address my aims, I used the variable field cricket (Gryllus lineaticeps) because its geographic range is …

Phylogenetic And Geographic Relationships Of Cheilostome Bryozoans In The Eastern Pacific, Hannah E. Lee

Cal Poly Humboldt theses and projects

The phylum Bryozoa is an incredibly diverse group of marine invertebrates with a widespread global distribution that is well suited for evolutionary studies but whose phylogenetic relationships are still poorly understood. Although recent studies on bryozoan taxonomies and phylogenies have increased, there is still a lack of assessment of species found at shallow water (<1 m) to intertidal depths. In this study, I aimed to expand the taxonomic sampling and assessment of the phylogenetic diversity of cheilostome bryozoans along the California coastline by utilizing mitochondrial DNA as well as inferring potential correlations between species presence and dispersal range both within and between rocky outer coast and sheltered harbor habitats. Illumina high-throughput sequencing was used to produce mitogenomes for cheilostome bryozoan samples collected off rocks from two rocky intertidal sites and off settlement panels from two harbor sites. Phylogenetic analyses generated evolutionary hypotheses of species relationships alongside geographic mapping of their distribution. This study identified 15 distinct species that represent 10 different families to form the first comprehensive phylogeny for multiple bryozoan families in California across a total range of approximately 973 km of coastline. Three genetically distinct species were found at multiple sites that are separated by a combination of rocky shores and sandy beaches, which indicates that the dispersal range of these species are not limited by geographic barriers along the coast of California. These results provide a future opportunity for further integration of this data with the phylogenies generated in this study to examine more robust evolutionary hypotheses for the phylogenetic and geographic relationships of Californian bryozoan species.

Fish Communities Respond To Hydrology And Elevation In Restored Western Kentucky Wetlands, Lucas Zuklic

Murray State Theses and Dissertations

The Wetlands Reserve Program (WRP) is designed to restore wetland ecological function and wildlife benefits; however, these projects rarely monitor biological responses. The objectives of our study were to (1) identify environmental factors that were the most important in determining wetland fish community composition, (2) examine the influence of the environment on specific groups of fish (large-river fishes and Kentucky Species of Greatest Conservation Need (KY-SGCN) wetland fishes), and (3) compare fish community composition and diversity in wetlands of different condition (e.g., degraded, restored, and reference). From April 2019 to August 2020, monthly electrofishing surveys were performed in degraded …

Re-Storying Grant Creek: A Case Study Of Relational Dynamics On A Degraded Montana Stream, Seamus Rucci Land

Graduate Student Theses, Dissertations, & Professional Papers

The UN Decade on Ecosystem Restoration began in 2021, and after a history of contentious ethical debates, ecological restoration is increasingly portrayed as a viable framework for combating environmental degradation and supporting more healthy and stable social-ecological systems. The proposed ecological restoration of Grant Creek, a degraded stream near Missoula, Montana, offers an opportunity to connect a restoration site to the broader, rapidly growing field of restoration practice. It also allows the opportunity to forward the ‘relational turn’ proposed by many in the sustainability sciences as an ontological and methodological means to move beyond positivist portrayals of social-ecological systems, which …

An Integrative Investigation Of The Synechococcus A/B Clade During Adaptive Radiation At The Upper Thermal Limit Of Phototrophy, Christopher L. Pierpont

Graduate Student Theses, Dissertations, & Professional Papers

Thermophilic microorganisms have been scientifically observed since the early nineteenth century and have spurred many questions about the limits of life and the capacity of organisms to survive extreme conditions. Decades of research on thermophile proteins and genomes have yielded several proposed correlates of temperature that may contribute to adaptation of bacteria and archaea to high temperature. However, many of the generalizations reported are drawn from analyses of deeply divergent taxa or from individual case studies in isolation from mesophilic relatives. Members of the Synechococcus A/B (SynAB) group are the only cyanobacteria with members able to grow above 65 °C …