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Articles 1651 - 1680 of 63009

Full-Text Articles in Computer Sciences

Modulation Of Hypothalamic–Limbic Circuits Regulating Appetite In Response To Health Lifestyle In Obese Adults, Nour Shakir Rezaieg, Muthanna M. Awad Jan 2026

Modulation Of Hypothalamic–Limbic Circuits Regulating Appetite In Response To Health Lifestyle In Obese Adults, Nour Shakir Rezaieg, Muthanna M. Awad

Karbala International Journal of Modern Science

Background: Overeating leads to obesity a low-grade inflammatory disease. In this context, aguati-related neuropeptide (AgRP) and ghrelin are pivotal players in appetite regulation, while chemerin is an adipose tissue-secreted adipokine that contributes to low-grade inflammation associated with obesity. Objective: This study used a healthy lifestyle program designed for each obese participant to identify diet-related neuro-hormonal changes in appetite regulation. Design, Setting, and Participants: This a longitudinal quasi-experimental controlled study was conducted from 1st December 2024, to 30th July 2025, at University of Anbar. The sample included 100 participants, 50 obese (weight between 100–140 kg) and 50 healthy participants …


Evaluation Of Mcf-7 Breast Cancer Cell Cytotoxic And Antioxidant Activities Of Peptide Fractions From Symbiotic Bacteria Of Jellyfish Catostylus Sp., Eka Sry Wahyuni, Ahyar Ahmad, Muhammad Nasrum Massi, Sofa Fajriah, Randi Rimpung, Muh. Akbar Ardiputra, Harningsih Karim, Irda Handayani Jan 2026

Evaluation Of Mcf-7 Breast Cancer Cell Cytotoxic And Antioxidant Activities Of Peptide Fractions From Symbiotic Bacteria Of Jellyfish Catostylus Sp., Eka Sry Wahyuni, Ahyar Ahmad, Muhammad Nasrum Massi, Sofa Fajriah, Randi Rimpung, Muh. Akbar Ardiputra, Harningsih Karim, Irda Handayani

Karbala International Journal of Modern Science

Marine-derived symbiotic microorganisms are recognized as a promising source of bioactive compounds with potential therapeutic applications, yet research on jellyfish-associated bacteria remains limited. This study examines the bioactivity of peptide fractions derived from symbiotic bacteria isolated from the jellyfish Catostylus sp., collected from the coastal waters of South Sulawesi, Indonesia, with a focus on their anticancer and antioxidant properties. Following sample collection, the symbiont bacteria were isolated, enzymatically hydrolyzed, and purified before their biological activity was evaluated. Preliminary cytotoxicity screening using the brine shrimp lethality assay revealed that the extracellular peptide fraction (5–10 kDa) and intracellular peptide fraction (3–5 kDa) …


A Robust Deep Learning Ensemble Framework For Waterbody Detection Using High-Resolution X-Band Sar Under Data-Constrained Conditions, Soyeon Choi, Seung Hee Kim, Son V. Nghiem, Menas Kafatos, Minha Choi, Jinsoo Kim, Yangwon Lee Jan 2026

A Robust Deep Learning Ensemble Framework For Waterbody Detection Using High-Resolution X-Band Sar Under Data-Constrained Conditions, Soyeon Choi, Seung Hee Kim, Son V. Nghiem, Menas Kafatos, Minha Choi, Jinsoo Kim, Yangwon Lee

Institute for ECHO Articles and Research

Accurate delineation of inland waterbodies is critical for applications such as hydrological monitoring, disaster response preparedness and response, and environmental management. While optical satellite imagery is hindered by cloud cover or low-light conditions, Synthetic Aperture Radar (SAR) provides consistent surface observations regardless of weather or illumination. This study introduces a deep learning-based ensemble framework for precise inland waterbody detection using high-resolution X-band Capella SAR imagery. To improve the discrimination of water from spectrally similar non-water surfaces (e.g., roads and urban structures), an 8-channel input configuration was developed by incorporating auxiliary geospatial features such as height above nearest drainage (HAND), slope, …


Influence Of Sinr And Noise Variance On Outage Probability For Mimo-Noma System In 5g And Beyond, Sadiq Ur Rehman, Jawwad Ahmed, Muhammad Zubair, Syed Sajjad Hussain Rizvi Jan 2026

Influence Of Sinr And Noise Variance On Outage Probability For Mimo-Noma System In 5g And Beyond, Sadiq Ur Rehman, Jawwad Ahmed, Muhammad Zubair, Syed Sajjad Hussain Rizvi

Turkish Journal of Electrical Engineering and Computer Sciences

Nonorthogonal multiple access (NOMA) communication presents a promising solution to the limitations of traditional orthogonal multiple access techniques, offering potential improvements in achievable rates. Multiple-input multiple-output (MIMO), when combined with NOMA (MIMO-NOMA), further enhances these benefits by leveraging the diversity advantages of multiple antennas. Looking ahead, the future of wireless communication hinges on deploying heterogeneous networks (HetNets), facilitating the coexistence of various wireless access networks in a hierarchical fashion. However, the advent of 5G and 6G communications brings shorter channel coherence times, rendering channel reciprocity unreliable. Consequently, conventional channel estimation methods relying on uplink (UL) pilots for downlink (DL) transmission …


Law Schools Should Teach How To Integrate Ai Tools Into Practice, Robert A. Mackenzie, David J. Reiss Jan 2026

Law Schools Should Teach How To Integrate Ai Tools Into Practice, Robert A. Mackenzie, David J. Reiss

Cornell Law Faculty Publications

Now that artificial intelligence tools for lawyers are widely available, we decided to integrate them for a semester in our Entrepreneurship Clinic. We have some important takeaways for legal education in general and the transactional practice of law in particular.

First, employers and educators need to account for law students who already are using AI tools in their legal work and guide new lawyers about how to use such tools appropriately.

Second, different AI products lead to wildly different results. Just demonstrating this to law students is very valuable, as it dispels the notion that AI responses can replace their …


Cover And Contents Jan 2026

Cover And Contents

Turkish Journal of Electrical Engineering and Computer Sciences

No abstract provided.


Exploitation Prioritization And Residual Risk Assessment Based On Hybrid Mcdm Model, Zibo Wang, Yaofang Zhang, Sicai Lv, Yingzhou Wang, Hongri Liu, Bailing Wang Jan 2026

Exploitation Prioritization And Residual Risk Assessment Based On Hybrid Mcdm Model, Zibo Wang, Yaofang Zhang, Sicai Lv, Yingzhou Wang, Hongri Liu, Bailing Wang

Turkish Journal of Electrical Engineering and Computer Sciences

Exploitation is one of the most significant ways to launch attacks using vulnerabilities. The increasing number of vulnerabilities and limited allocation of security resources make it impossible to eliminate all exploitations. Because not every vulnerability can be fixed, it is necessary to rank exploitations and subsequently assess the residual risk, which is defined as the remaining threat potential after each elimination. In this paper, a structured and flexible decision support framework based on a hybrid multicriteria decision-making model is proposed for prioritizing exploitations and assessing residual risk. Metrics are treated as criteria in the model. The hybrid model is developed …


A Deep Learning-Based Real-Time No-Reference Image Decolorization Network With Perceptual Preservation, Mengjuan Zhao, Yitao Liang, Weiya Shi, Juan Xia Jan 2026

A Deep Learning-Based Real-Time No-Reference Image Decolorization Network With Perceptual Preservation, Mengjuan Zhao, Yitao Liang, Weiya Shi, Juan Xia

Turkish Journal of Electrical Engineering and Computer Sciences

Currently, grayscale images are preferred as input data for some specific vision tasks. Decolorization is the transformation of a color image into a grayscale image. Efficient decolorization algorithms can improve the overall task efficiency, while perceptual preservation in decolorization can provide more information for further processing. In recent research, traditional methods focus on preserving contrast or detail information with little attention to perceptual features. Deep-learning methods are beginning to consider perceptual preservation, but they run inefficiently. In addition, the decolorization methods lack the optimal target grayscale images for reference. Therefore, we propose a new deep learning-based real-time no-reference decolorization network …


Distribution System Reliability Evaluation Considering Protection Coordination Using Petri Nets, Rani Kumari, Bhukya Krishna Naick Jan 2026

Distribution System Reliability Evaluation Considering Protection Coordination Using Petri Nets, Rani Kumari, Bhukya Krishna Naick

Turkish Journal of Electrical Engineering and Computer Sciences

Maintaining reliable and high-quality power delivery becomes increasingly complex with expanding power grids. The lack of protection coordination poses a significant threat, compromising overall system reliability. This research addresses this challenge by proposing a method for coordinating protective devices within the distribution system, specifically during network faults. The proposed approach utilizes a stochastic timed Petri net (STPN) based methodology to model protective device coordination across various fault scenarios. This technique effectively captures the dynamic behavior and interactions of protective equipment, allowing for the anticipation of potential disturbances. This proactive insight facilitates preventative measures to address prewarning situations, thereby preventing cascading …


Noninvasive Condition Monitoring For Eccentricity Fault Detection In Large Hydro Generators, Atena Tazikeh Lemeski, Di̇dem Tekgün, Ozan Keysan, Kemal Leblebi̇ci̇oğlu, Murat Göl Jan 2026

Noninvasive Condition Monitoring For Eccentricity Fault Detection In Large Hydro Generators, Atena Tazikeh Lemeski, Di̇dem Tekgün, Ozan Keysan, Kemal Leblebi̇ci̇oğlu, Murat Göl

Turkish Journal of Electrical Engineering and Computer Sciences

Eccentricity faults in electric machines remain a critical concern, as they generate uneven magnetic forces that increase vibration and noise, ultimately raising the risk of premature motor failure. This study proposes a method for the early detection of dynamic eccentricity (DE) faults in hydropower plants through an advanced optimization-based parameter identification technique integrated with finite element analysis (FEA). Finite element modeling (FEM) is first used to analyze an existing salient-pole synchronous generator (SPSG) from a hydroelectric power plant in Türkiye. The effects of DE faults on the SPSG’s magnetic equivalent circuit parameters are then examined under various fault severities. A …


A Deep Learning Model For Accurate Tomato Leaf Disease Identification, Maheen Shahzad, Muhammad Abdullah Javed, Erum Ashraf, Hafiz Ishfaq Ahmad, Sabeen Masood Jan 2026

A Deep Learning Model For Accurate Tomato Leaf Disease Identification, Maheen Shahzad, Muhammad Abdullah Javed, Erum Ashraf, Hafiz Ishfaq Ahmad, Sabeen Masood

Turkish Journal of Electrical Engineering and Computer Sciences

Recent advances in machine learning and deep learning have greatly improved how we detect plant diseases, making diagnoses more accurate, faster, and easier to scale. However, many existing solutions depend on large, pretrained models that need powerful hardware, which limits their use in the field, especially in areas with limited resources. To tackle this, we designed a custom lightweight convolutional neural network (CNN) built from scratch using 20,000 carefully selected images from the PlantVillage tomato dataset. Our model uses Squeeze-and-Excitation (SE) blocks and Swish activation functions to boost performance, reaching an accuracy of 97.7% while using far fewer computing resources …


A Novel Approach To Maximum Weighted Traffic Flow Method For Effective Signal Control, Zülal Hi̇lal Yildiz Budak, Seyi̇t Alperen Çeltek, Aki̇f Durdu Jan 2026

A Novel Approach To Maximum Weighted Traffic Flow Method For Effective Signal Control, Zülal Hi̇lal Yildiz Budak, Seyi̇t Alperen Çeltek, Aki̇f Durdu

Turkish Journal of Electrical Engineering and Computer Sciences

Traffic signal management is a critical challenge due to its environmental, economic, and public health impacts. The maximum weighted flow method (MaxWeightedFlow) was developed to optimize traffic flow at isolated and coordinated urban intersections. This study proposes a new method, the novel MaxWeightedFlow, which includes two key strategies to enhance the classical approach. The first strategy reduces computational burden by estimating vehicle approach times based on instantaneous speeds, improving real-time performance. The second employs regression analysis to optimize the alpha parameter, representing the vehicle waiting coefficient. The proposed approach, the novel MaxWeightedFlow, was evaluated using real-world traffic data from Kilis, …


Improving Rail System Signaling Efficiency Through Ai-Based Driving Profile Generation: A Comparative Performance Analysis, Mehmet Taci̇ddi̇n Akçay, Abdurrahi̇m Akgündoğdu Jan 2026

Improving Rail System Signaling Efficiency Through Ai-Based Driving Profile Generation: A Comparative Performance Analysis, Mehmet Taci̇ddi̇n Akçay, Abdurrahi̇m Akgündoğdu

Turkish Journal of Electrical Engineering and Computer Sciences

In this study, a dataset comprising 3600 discrete operational snapshots (rather than continuous time-series data) derived from real-field operations is used to obtain a high-accuracy driving profile equation using a second-degree Polynomial Regression method. This equation demonstrates the model’s interpretability. The performance metrics obtained with the second-degree polynomial regression model’s equation are as follows: a coefficient of determination (R2) of 0.84, a Pearson Correlation Coefficient of 0.91, and an RMSE of 11.13. These results indicate the effectiveness of artificial intelligence-based approaches in improving the efficiency of the railway signaling system. The same dataset is also utilized with other machine learning …


Analysis Of A Few Quantum Algorithms And Circuits Related To Boolean Functions, Suman Dutta Jan 2026

Analysis Of A Few Quantum Algorithms And Circuits Related To Boolean Functions, Suman Dutta

Doctoral Theses

Boolean functions are fundamental to computation and presently play a crucial role in quantum information processing. This thesis presents two facets of Boolean functions in the context of quantum computing: (I) extending and applying the theoretical framework of Forrelation to cryptographic analysis, and (II) designing efficient quantum circuits for multi-controlled Toffoli gates and Boolean circuit implementations. Given two Boolean functions $f$ and $g$, Forrelation, introduced by Aaronson (2010), measures the correlation between the truth table of $f$ and the Walsh-Hadamard transform of $g$ at the corresponding points. Here, we revisit the Forrelation framework to study several cryptographically significant spectra of …


Combinatorial & Algebraic Approaches In Analyzing Mutually Unbiased Bases (Mubs) And Their Approximations, Rakesh Kumar Jan 2026

Combinatorial & Algebraic Approaches In Analyzing Mutually Unbiased Bases (Mubs) And Their Approximations, Rakesh Kumar

Doctoral Theses

Mutually Unbiased Bases (MUBs) are an important concept in quantum information theory. Two orthonormal bases in a $d$-dimensional complex Hilbert space $\mathbb{C}^d$ are said to be mutually unbiased if the absolute value of the inner product between any pair of vectors, one from each basis, is $1/\sqrt{d}$. A set of $r$ orthonormal bases is called mutually unbiased if every pair of bases in the set is unbiased. It is known that at most $d + 1$ mutually unbiased bases can exist in $\mathbb{C}^d$, and a set achieving this bound is termed a \emph{complete sets of MUBs} in $\mathbb{C}^d$. We can …


Single-Valued Neutrosophic Pessimistic Multi-Granulation Rough Set Model Based On (A,B,C)-Cut Relations And Its Applications, Xu-Xi Wu, Hu Zhao, Qiao-Ling Song, Xiong-Wei Zhang Jan 2026

Single-Valued Neutrosophic Pessimistic Multi-Granulation Rough Set Model Based On (A,B,C)-Cut Relations And Its Applications, Xu-Xi Wu, Hu Zhao, Qiao-Ling Song, Xiong-Wei Zhang

Neutrosophic Systems with Applications

To address uncertainty in multi-source data, this paper proposes a single-valued neutrosophic pessimistic multi-granulation rough set (P-SVN-MGRS) model based on (a,b,c)-cut relations. In this framework, each neutrosophic relation is characterized by three membership-degree functions: T(x,y), I(x,y), and F(x,y). These functions correspond to truth-membership, indeterminacy, and falsity, respectively. The (α,β,γ)-cut relation employs parameters α,β,γ∈(0,1] as thresholds for the three functions. A pair (x,y) belongs to …


Pythagorean Neutrosophic Mathematical Modelling, M. Kavitha, R. Irene Hepzibah Jan 2026

Pythagorean Neutrosophic Mathematical Modelling, M. Kavitha, R. Irene Hepzibah

Neutrosophic Systems with Applications

Survey-based assessments often suffer from ambiguity, inconsistency, and uncertainty, which weaken the reliability of decision-making outcomes. To address these challenges, this study proposes a novel decision-support framework for data fuzzification, ranking, and agility measurement using Pythagorean Neutrosophic Fuzzy Sets (PNFS). The proposed method offers three major advantages: (i) enhanced ability to capture high levels of indeterminacy compared with classical fuzzy and intuitionistic models, (ii) improved ranking accuracy through a newly developed score function and ranking algorithm, and (iii) greater robustness in scenarios involving conflicting, incomplete, or imprecise expert judgments. The framework includes a refined Pythagorean Neutrosophic fuzzification technique, mathematically supported …


Neutrosophic Hankel Transforms And Their Application To Cross-Domain Legislative Integration, Mona Gharib, Mehboob Ali, Ishtiaq Hussain Jan 2026

Neutrosophic Hankel Transforms And Their Application To Cross-Domain Legislative Integration, Mona Gharib, Mehboob Ali, Ishtiaq Hussain

Neutrosophic Systems with Applications

This paper introduces the Neutrosophic Hankel Transform (NHT) as a novel mathematical framework for modeling systems with radial structure under uncertainty, indeterminacy, and inconsistency. Building upon classical Hankel transforms and neutrosophic logic, we define two complementary realizations: a componentwise transform (NHT–C) that transports uncertainty with the signal, and a kernel-weighted transform (NHT–K) that embeds neutrosophic weights into the integral kernel. We establish linearity, inversion, and Parseval-type relations, and derive operational rules that diagonalize the Bessel radial operator.

To demonstrate utility, we formulate a radial diffusion–reaction model for pollutant concentration in a radialized river cross-section and solve it in closed form …


A Study Of Regular And Irregular Complex Neutrosophic Vague Graphs, Suriyakumar G, V. J. Sudhakar Jan 2026

A Study Of Regular And Irregular Complex Neutrosophic Vague Graphs, Suriyakumar G, V. J. Sudhakar

Neutrosophic Systems with Applications

In this paper, We define the regular complex neutrosophic vague graph and the irregular complex neutrosophic vague graph for this purpose. We specify a node’s degree and total degree in a normal complex neutrosophic vague graph. A few features and theorems of those regular and irregular complex neutrosophic vague graphs are presented. This article defines busy and free nodes in a normal complex neutrosophic vague graph. Also, we describe a regular and irregular complex neutrosophic vague graph with a cycle as the underlying crisp graph.


From Uncertainty To Lucidity: Awareness Neutrosophic Kähler-Einstein Innovative Evaluator Methodological In Era Of Green Artificial Intelligence, Mona Mohamed, Ahmed M. Ali Jan 2026

From Uncertainty To Lucidity: Awareness Neutrosophic Kähler-Einstein Innovative Evaluator Methodological In Era Of Green Artificial Intelligence, Mona Mohamed, Ahmed M. Ali

Neutrosophic Systems with Applications

The rapid development of generative artificial intelligence (Gen AI) is a double-edged sword. On the positive side, Large Language Models (LLMs) of Gen AI as chatbot considered intelligent friend. Due to its potential to stimulate the maturation of ideas and cultivate fundamental general abilities like problem-solving and critical thinking. The advancement of Gen AI continued after that, moving from “chatbots” to “AI agents” that carry out multi-step activities in addition to responding to queries.

Regarding the downside, the terminology of “Red AI” era brought about by generative AI is marked by a performance at any expense that puts pressure on …


Stylespade: Realistic Image Augmentation For Robust Infrastructure Crack Segmentation Via Ensemble Learning, Jaeung Sim, Menas Kafatos, Seung Hee Kim, Yangwon Lee Jan 2026

Stylespade: Realistic Image Augmentation For Robust Infrastructure Crack Segmentation Via Ensemble Learning, Jaeung Sim, Menas Kafatos, Seung Hee Kim, Yangwon Lee

Institute for ECHO Articles and Research

The rapid deterioration of global infrastructure necessitates precise and automated crack detection technologies for proactive maintenance. However, deep learning-based segmentation models often suffer from a scarcity of diverse, high-quality labeled datasets. This study proposes StyleSPADE, a novel conditional image generation model that integrates semantic masks and style images to synthesize realistic crack data with diverse background textures while preserving precise geometric morphology. To validate the effectiveness of the generated data, we conducted extensive semantic segmentation tasks using Transformer-based (Mask2Former, Swin-UPerNet) and CNN-based (K-Net) models. Experimental results demonstrate that StyleSPADE-based augmentation significantly outperforms baseline models, achieving a Crack IoU of 0.6376 …


Developing Pattern Recognition And Interpretable Convolutional Neural Network Based Frameworks For Identifying Drug Resistant And Pan Cancer Mirnas From Expression Data, Joginder Jsingh Jan 2026

Developing Pattern Recognition And Interpretable Convolutional Neural Network Based Frameworks For Identifying Drug Resistant And Pan Cancer Mirnas From Expression Data, Joginder Jsingh

Doctoral Theses

Micro Ribonucleic Acids (miRNAs) are short length (∼24) non-coding RNAs and are considered as key biomarkers in cancer diagnosis and treatment. They play a vital role in classifying cancer patients from normal ones and drug resistant patients from control ones. The control patients are those who have not received any drug for cancer treatment. The objective is to identify a subset of miRNAs those help in the classification of the patients using expression data. The thesis is comprised of four contributory chapters in addition to an introduction and conclusion. In the first two contributory chapters, computational methods for ranking and …


Environmental Degradations In Images: Analysis, Restoration, And Applications, Harsh Bhandari Jan 2026

Environmental Degradations In Images: Analysis, Restoration, And Applications, Harsh Bhandari

Doctoral Theses

This thesis investigates computational models and methodologies for restoring images degraded by challenging environmental conditions such as haze and underwater environments. It further explores the analysis and estimation of particulate matter (PM) concentration from both day and night scenes under varying weather conditions, using degraded visual data as a primary input. Each environment introduces distinct forms of visual degradation, making image restoration a critical challenge that directly impacts applications including visibility enhancement, weather analysis, particulate concentration estimation, and object detection. By addressing these challenges, this thesis aims to develop adaptable, data-driven solutions that enhance image clarity and improve information extraction …


Are You An Ai Convert Yet?, Essraa Nawar Jan 2026

Are You An Ai Convert Yet?, Essraa Nawar

Library Articles and Research

"At one point that evening, after the conversation had moved from travel to work and then to responsibility, Marium paused and asked me what I did. It was not the transactional question that so often fills conference hallways, asked politely and quickly abandoned, but a genuine inquiry. When I told her that I chair the Artificial Intelligence Committee at Leatherby Libraries at Chapman University, and that my work centers on AI literacy, governance, and institutional decision-making rather than promotion or blind adoption, something subtle changed."


Confluence, Vol. 4, Iss. 2, Full Issue Jan 2026

Confluence, Vol. 4, Iss. 2, Full Issue

The Confluence

No abstract provided.


A Review Of Routing Attacks In Routing Protocol Over Low-Power And Lossy-Based Iot Networks, Lanka Chris Sejaphala Mr., Vusimuzi Malele Prof, Francis Lugayizi Prof. Jan 2026

A Review Of Routing Attacks In Routing Protocol Over Low-Power And Lossy-Based Iot Networks, Lanka Chris Sejaphala Mr., Vusimuzi Malele Prof, Francis Lugayizi Prof.

Journal of Cybersecurity Education, Research and Practice

Low-power and Lossy IoT Networks (LLNs) comprise physical sensors, processing capability, power, and other technologies to exchange information between systems and devices over the internet. However, these networks are susceptible to routing attacks affecting resources, traffic flow, and topology formation. In the related work, it has been discovered that many previous studies do not consider algorithms and implementation approaches for routing attacks. This research study provides a comprehensive in-depth synthesis insight into the description, effects, and algorithms & implementation of four routing attacks in LLNs i.e., rank, sinkhole, DIS-flooding, and worst parent attacks. The findings of this research study highlight …


Wild@Fire2025: Overview Of Word-Level Code-Mixed Language Identification In Dravidian Languages, Ameeta Agrawal, Asha Hegde, Sharal Coelho, Sabur Butt, Fazlourrahman Balouchzahi, Sudha V, Shashirekha Hosahalli Lakshmaiah Jan 2026

Wild@Fire2025: Overview Of Word-Level Code-Mixed Language Identification In Dravidian Languages, Ameeta Agrawal, Asha Hegde, Sharal Coelho, Sabur Butt, Fazlourrahman Balouchzahi, Sudha V, Shashirekha Hosahalli Lakshmaiah

Computer Science Faculty Publications and Presentations

Code-mixing is considered as a linguistic phenomenon that combines several languages into one text. It has now become very common in multilingual societies, especially in digital communication. Word-Level Identification of Languages in Dravidian Languages (WILD) - a Code-mixed Language Identification (CoLI) in Dravidian languages shared task, organized as a part of Forum for Information Retrieval and Evaluation (FIRE) 2025, put forward these challenges to the researchers by asking them to develop models capable of classifying words in code-mixed texts involving Dravidian languages - Tamil, Telugu, Malayalam, Kannada, and Tulu, which are interwoven with English. It poses significant challenges due to …


Reformulation Of The Protein Databank For Real-Time Search Of Geometrical Attributes Of Protein Structures, Musa Azeem, Christopher Lee, Aaron Hein, Christopher Ott, Homayoun Valafar Jan 2026

Reformulation Of The Protein Databank For Real-Time Search Of Geometrical Attributes Of Protein Structures, Musa Azeem, Christopher Lee, Aaron Hein, Christopher Ott, Homayoun Valafar

Faculty Publications

Introduction:

In this study, we introduce the design and implementation of PDBMine, a large-scale, queryable platform for mining sequence-structure statistics from the Protein Data Bank (PDB). PDBMine enables rapid analysis of local conformational trends across proteins by extracting dihedral angles and sequence patterns at scale. In addition to the design and implementation of PDBMine, we also present results validating its ability to return structurally meaningful information.

Methods:

We first assess the accuracy of its dihedral angle distributions by comparing them to established Ramachandran space and verifying expected behaviors of residues such as glycine and proline. We then use PDBMine to …


Densest Subgraph Discovery On The Cpu, Hunter Gerard Gareau Jan 2026

Densest Subgraph Discovery On The Cpu, Hunter Gerard Gareau

Theses and Dissertations

The Densest Subgraph Discovery (DSD) problem is a prevalent problem in the field of graph mining, aiming to find the cohesive subgraph. Given a graph �� = (��,��) and an integer �� ≥ 2, the goal is to find a vertex sub- set �� ⊆ �� whose induced subgraph �� (��) maximizes the ��-clique density, defined as the number of ��-cliques per vertex. Larger val- ues of �� capture higher-order connectivity patterns beyond edges, enabling the discovery of more cohesive structures. There have been many solutions to this problem. However, one avenue that other graph mining problems have gone down …


Antibacterial Peptides From Soybean (Glycine Max (L.) Merr.) With In Silico Study Against Escherichia Coli Bacteria, Dian Riana Ningsih, Ely Setiawan, Purwati Purwati, Zusfahair Zusfahair, Anita Hindayanti Rukmana Jan 2026

Antibacterial Peptides From Soybean (Glycine Max (L.) Merr.) With In Silico Study Against Escherichia Coli Bacteria, Dian Riana Ningsih, Ely Setiawan, Purwati Purwati, Zusfahair Zusfahair, Anita Hindayanti Rukmana

Karbala International Journal of Modern Science

Bioactive peptides are produced from soy milk protein hydrolysis using trypsin. The research began with the preparation and separation of soy milk protein, followed by fractionation using ammonium sulphate, protein hydrolysis, and SDS-PAGE analysis of protein hydrolysates. Fractions exhibiting the highest degree of hydrolysis were further fractionated by SPE and tested to determine the antibacterial activity Staphylococcus aureus and Escherichia coli. The peptide sequence of the active peptide as an antibacterial was identified, employing LC-HRMS. The mode of action between active peptides and bacterial membran was analysed using molecular dynamics (MD) simulation. The findings displayed that F15 contained the highest …