Botany Commons^™

Genetic Structure Of Pseudoroegneria Spicata In The Northern Palouse Prairie And Channeled Scablands, Ethan Timothy Bean

EWU Masters Thesis Collection

Establishing genetically diverse communities that can adapt to dynamic selective pressures is crucial in ecological restoration. However, the genetic structure of native plant species used for restoration is often poorly understood. Pseudoroegneria spicata, is a keystone species of the Inland Northwestern US that has become a staple in commercially available restoration seed mixes. It is abundant in remnant prairies of the endangered Palouse Prairie ecoregion, which is characterized by rolling hills of deep loess soil. Less than 1% of native Palouse Prairie is left, due to agricultural conversion, with remnants highly fragmented and isolated. P. spicata is also common in …

Evaluation Of The Effects Of Temperature, Light, And Uv-C Radiation On Hsp70aexpression In Chlamydomonas Reinhardtii, Tuba Sevgi̇, Eli̇f Demi̇rkan

Turkish Journal of Botany

In this study, various physical parameters (temperature, light intensity and UV-C radiation) which could be effective in heat shock response on C.reinhardtii by using molecular tools were investigated. In total, 256 transformants were obtained, among them, 160 transformants had continuous expression while 96 of them had heat-inducible expression. In these transformants, arylsulfatase activities were detected qualitatively and quantitatively. The best two transformants were selected and used in studies. To determine the effect of temperature, the cells were shifted from 23 °C to 35 °C, 37 °C, 40 °C and 42 °C. The heat shock response was induced at all temperatures. …

Interactive Effects Of Salinity And Plant Density On The Growth Ofcyperus Arenarius, A Sand Dune Stabilizer, Farhat Agha, Muhammad Zaheer Ahmed, Bilquees Gul, Muhammad Ajmal Khan

Turkish Journal of Botany

Competition and environmental stress are crucial factors for structuring plant population in natural habitats. Cyperus arenarius, a sedge of coastal sand dunes habitat, is a suitable species for coastal restoration and dune stabilization, but how salinity and plant density interact in affecting its growth is still unknown. Here, growth, survival, and physiological responses of C. arenarius to salinity (sea-salt) and plant density were investigated. A set of growth experiments in which combinations of 4 salinity levels (0, 2, 4, and 6 S m-1 sea-salt) and 3 planting densities (2, 5, 8 plants pot-1) were tested under controlled greenhouse conditions. Plant …

Medicinal Plants Of Pakistan And Their Xanthine Oxidase Inhibition Activity To Treat Gout:A Systematic Review, Kanwal Ashiq, Khalid Hussain, Muhammad Islam, Naureen Shehzadi, Ejaz Ali, Sana Ashiq

Turkish Journal of Botany

Gout is the most prevalent form of arthritis that arises due to hyperuricemia. Xanthine oxidase inhibitors (XOI) are usually prescribed to treat gout. Although treatment options are available, these therapies are associated with side effects, and natural remedies may be proven helpful in this regard. This systematic review aims to present consolidated information on the xanthine oxidase inhibition potential of the plants located in Pakistan. An extensive literature review reveals that no such study that systematically summarizes existing data is currently available. The present study is registered with PROSPERO (ID: CRD42021247416) and performed according to PRISMA guidelines. Several databases were …

Phenolic Content, Antibacterial, Antioxidant, And Toxicological Investigations Oferodium Guttatum (Geraniaceae) Collected From The Northeast Of Morocco, Hanae Naceiri Mrabti, Latifa Doudach, Mohamed Reda Kachmar, Abdelaziz Ed Dra, Zineb Khali, Nidal Naceiri Mrabti, Kaoutar Benrahou Benrahou, Khouloud Harraqui, Gökhan Zengi̇n, Abdelhakim Bouyahya, Moulay El Abbes Faouzi

Turkish Journal of Botany

Erodium genus contains several medicinal traditionally used and pharmacologically explored. However, Erodium guttatum has not been well valorized. Therefore, the aim of the present study was to evaluate the antibacterial and antioxidant activities of E. guttatum extracts in addition to their toxicity. To achieve the objectives of this study, methanol and aqueous extracts of E. guttatum were prepared. Then, antibacterial activity was evaluated against Escherichia coli ATCC 25922, Klebsiella pneumoniae ATCC 43816, Salmonella typhimurium ATCC 14028, Pseudomonas aeruginosa ATCC 27853, Staphylococcus aureus ATCC 25923, and Listeria monocytogenes ATCC 13932 by disc diffusion and broth microdilution methods. The antioxidant activity was …

A Comparative Study Of Physicochemical Properties, Antioxidant And Enzyme Inhibitionactivities Of Oils Extracted From Seeds Of Seven New Sunflower (Helianthus Annuus L.) Lines, Ahmed A. A. Abdalla, Sakina Yagi, Gökhan Zengi̇n, Abdelwahab H. Abdallah, Abdirahman Elmi, Rosella Spina, Francois Dupire, Dominique Mattar

Turkish Journal of Botany

This study was aimed to evaluate the physicochemical properties and chemical profile of seeds oil obtained from new seven sunflower (Helianthus annuus L.) lines as well as their antioxidant and enzyme inhibition activity. The seeds powder was extracted by maceration in n-hexane. The oil content of the seven lines was ranged from 20.04% to 36.65% and was either yellow or pale yellow in color. No significant variations were observed on the refractive index (1.46 unit) of the oil. Oils of the seven lines were significantly (p ? 0.05) different in their saponification values (32.13-282.66 mg KOH/g oil), peroxide values (1.76-13.26 …

Mesua Ferrea L. (Calophyllaceae) Exerts Therapeutic Effects In Allergic Asthma Bymodulating Cytokines Production In Asthmatic Rats, Poonam Arora, Shahid Hamid Ansari, Lalit Mohan Nainwal

Turkish Journal of Botany

In the present study, ethanolic extract of Mesua ferrea L. stamens was investigated for its potential to reverse some features of bronchial asthma in ovalbumin-induced murine model of asthma. Mesua ferrea commonly called nagakeshar (Family, Calophyllaceae) is a well-known antiallergic drug in the Asian folk system of medicines. In the present work, pharmacological studies are done to provide scientific evidence for therapeutic potential of plants in allergic asthma. Asthma was induced in experimental rats with allergen suspension of ovalbumin and aluminium hydroxide followed by treatment with dexamethasone (2.5 mg/Kg, p.o) or M. ferrea stamen extract (3.75 and 15 mg/Kg, b.w., …

Inhibitory Effects Of Propiconazole On Rice Root Development And Abilities Of Brassinosteroid And Auxin In Alleviating Its Effects, Watcharapong Wimonchaijit

Chulalongkorn University Theses and Dissertations (Chula ETD)

Propiconazole is commonly used as a fungicide to minimize crop loss caused by various fungal diseases in many crop plants, including rice. Propiconazole has the potentials to deteriorate the environmental problems due to its chemical properties that it is highly persistent in soil after application, suggesting that the constant use of propiconazole could be problematic. Hence, the evaluation of its effects on plant growth and development is necessary for the assessment of future use of propiconazole. Here, we demonstrated that propiconazole had inhibitory effects on plant growth. Treatments of propiconazole resulted in shoot dwarfism, abnormal leaf morphology, reduced plant biomass, …

Epiphytic Microbiota Of Kai Cladophora Sp. From Nan River, Nan Province, Thailand, Karnjana Ruen-Pham

Chulalongkorn University Theses and Dissertations (Chula ETD)

Cladophora is a cosmopolitan green algal genus in northern Thailand, commonly known as Kai or Sa Rai Kai, which the local people use for culinary and medicinal purposes. In nature, Cladophora acts as an ecological engineer in the ecosystem by creating, modifying, and maintaining the habitat by providing oxygen and microhabitats for several organisms, including prokaryotes and eukaryotes, namely epiphytic microbiota. These epiphytic microbiota living on the algal host's surface might exhibit crucial roles in the ecosystem. However, most understandings of the Cladophora microbiota were from the USA. Therefore, this study aims to investigate the Cladophora microbiota collected from Nan …

Effect Of Osgtl1 Promoter Editing On Stomatal Distribution Pattern And Photosynthesis In Rice Oryza Sativa L., Widya Fajariani

Chulalongkorn University Theses and Dissertations (Chula ETD)

GT2-LIKE1 (GTL1) gene is a negative regulator of stomatal development. It regulates stomatal number in plants. The CRISPR/Cas9 system has been used to modify the OsGTL1 promoter. This research aims to screen Cas9-free rice with OsGTL1 promoter modification to investigate the modification effects on the stomatal distribution pattern and the photosynthesis process. Cas9 specific primers were designed for Cas9 screening in all tillers of 8 T3 rice lines. Among them, only a single T3 line was found to be Cas9-free in all tillers. The nucleotide sequences of OsGTL1 promoter in some Cas9-free plants revealed the modification in OsGTL1 promoter, which …

Phylogenetic Analysis Of Salt Tolerant Genes In Local Thai Rice And Salt Tolerant Gene Identification By F2 Bulk-Segregant Analysis, Susinya Habila

Chulalongkorn University Theses and Dissertations (Chula ETD)

Genetic diversity is important for developing salt-tolerant rice varieties. This research used the existing whole-exome sequences of eight Thai rice varieties, including the standard checks for tolerance and susceptibility, and the previously reported salt-tolerant genes to understand the mechanisms of salt tolerance in Thai rice, as well as the bulk-segregant analysis (BSA) to identify salt-tolerant QTLs in ‘Jao Khao’, the salt tolerant Thai rice. Salt responsive characteristics were used to classify tolerant and susceptible genotypes at the seedling stage. Phylogenetic analysis of SNPs from exome sequences showed that the Thai rice varieties were monophyletic and distantly related to 'Pokkali' and …

Stomatal Conductance And Reed Canary Grass Suppression Traits Of Native Michigan Trees, David E. Martinez, Martin L. Vanderschoot, Dave Warners

Student Papers and Reports

Reed canary grass (Phalaris arundinacea), a prominent invasive understory species, threatens native Michigan biodiversity statewide. A notable affected area includes a stretch of agricultural land along Schooley Drain in Caledonia, MI, located in the headwaters of the Plaster Creek watershed. Our study pursues the following questions: “Do native trees provide enough shade to reduce the growth of Reed canary grass?” and “Which native trees best transpire water from a floodplain?”: To answer these questions, we initiated a long term evaluation of seven different species of native Michigan trees to investigate which species best inhibits the growth of reed …

The Systematics Of Physaria Sensu Stricto From Wyoming And Surrounding Areas, Jason Ratcliff

Dissertations and Theses @ UNI

Two genera of Brassicaceae – Lesquerella and Physaria – were recently united on the basis of monophyly. Classically, these genera have been distinguished based on morphology with 'traditional” Physaria species having doubly inflated (didymous) fruits. Molecular data consisting of ribosomal internal transcribed spacer (ITS) DNA sequences indicate Physaria has evolved from the larger Lesquerella genus, thus making Lesquerella a paraphyletic grouping as previously described. A revised treatment of the combined Physaria recognized 106 species within the genus, of which 26 taxa occur in Wyoming. Of the Wyoming taxa, those traditionally described as belonging to Physaria (i.e.Physaria sensu stricto) have …

Capparis Decidua Edgew (Forssk.) Stem Extract Alleviates The Water Stress Perturbations In Wheat (Triticum Aestivum L.) At Early Growth Stage, Muhammad Nawaz, Qasim Ali, Muhammad Azeem, Fehmina Asghar, Hasnain Ishaq, Naeem Iqbal, Sajid -Ur-Rahman

Journal of Bioresource Management

Water shortage is one of the major limiting factors of crop productivity worldwide. This study was planned to explore the impact of Capparis decidua stem extract on wheat varieties (FSD-2008, 12066 and 13348) under water stress condition. Water deficit condition negatively impacted the seedling germination, growth, photosynthetic pigments and ions uptake capacity. Water limited condition significantly (p≤0.05) increased time to attain 50% germination, lipid peroxidation, H₂O₂ and enhanced the antioxidant mechanism to overcome the oxidative stress. Different concentrations of C. decidua extract i.e. Not Soaking (NS), 10%, 20%, 30% and 40% were used for seed …

Characterizing Patterns In Texas Gulf Coast Beach Dune Plant Species Composition, Cody Foster

Electronic Theses and Dissertations

Regional vegetation patterns of Texas beach plant communities were analyzed using cluster analysis, ANOSIM, SIMPER, NMDS, and ISA for fives zones representing the foredune complex of twenty Gulf Coast beaches. ANOVA revealed that zones differ in terms of percent bare sand, percent vegetative cover, and species richness. Cluster Analysis, ANOSIM, and SIMPER results indicate that Texas beaches can be divided into northern and southern regions based on differences in species composition of plant communities. Indicator Species Analysis (ISA) indicates that northern beaches are characterized by the presence of Rayjacksonia phyllocephala, Ambrosia Strophostyles, Ambrosia psilostachya, and Panicum amarum …

Genome-Wide Association Mapping And Genomic Prediction Of Anther Extrusion In Cimmyt Hybrid Wheat Breeding Program Via Modeling Pedigree, Genomic Relationship, And Interaction With The Environment, Anil Adhikari, Bhoja Raj Basnet, Jose Crossa, Susanne Dreisigacker, Fatima Camarillo, Pradeep Kumar Bhati, Diego Jarquin, Yann Manes, Amir M.H. Ibrahim

Department of Agronomy and Horticulture: Faculty Publications

Anther extrusion (AE) is the most important male floral trait for hybrid wheat seed production. AE is a complex quantitative trait that is difficult to phenotype reliably in field experiments not only due to high genotype-by-environment effects but also due to the short expression window in the field condition. In this study, we conducted a genome-wide association scan (GWAS) and explored the possibility of applying genomic prediction (GP) for AE in the CIMMYT hybrid wheat breeding program. An elite set of male lines (n = 603) were phenotype for anther count (AC) and anther visual score (VS) across three field …

Development Of Mping-Based Activation Tags For Crop Insertional Mutagenesis, Alexander Johnson, Edward Mcassey, Stephanie Diaz, Jacob Reagin, Priscilla S. Redd, Daymond R. Parrilla, Hanh T. Nguyen, Adrian Stec, Lauren A.L. Mcdaniel, Thomas E. Clemente, Robert M. Stupar, Wayne A. Parrott, C Nathan Hancock

Department of Agronomy and Horticulture: Faculty Publications

Modern plant breeding increasingly relies on genomic information to guide crop improvement. Although some genes are characterized, additional tools are needed to effectively identify and characterize genes associated with crop traits. To address this need, the mPing element from rice was modified to serve as an activation tag to induce expression of nearby genes. Embedding promoter sequences in mPing resulted in a decrease in overall transposition rate; however, this effect was negated by using a hyperactive version of mPing called mmPing20. Transgenic soybean events carrying mPing-based activation tags and the appropriate transposase expression cassettes showed evidence of transposition. Expression analysis …

New Record Of Bacopa Egensis (Plantaginaceae) For The Flora Of Mexico, Daniel Gonzalez-Socoloske, Nicholas P. Tippery, Nelly Del Carmen Jiménez Pérez, Donald H. Les

Faculty Publications

Bacopa egensis is newly reported for the flora of Mexico and an updated key is provided for the Mexican Bacopa species

The Virome Of Peony And The Population Structure Of Its Most Prominent Viruses, Cullen Shaffer

Graduate Theses and Dissertations

Peony (Peonia lactiflora, Pall.) is a popular ornamental that has been cultivated for millennia. Due to its popularity, plant material is frequently moved across international borders allowing for the spread of viruses. The virome of several peony plants was investigated and four viruses; namely Amazon lily mild mottle virus (ALiMMV), Cycas necrotic stunt virus (CNSV), Gentian Kobu-sho associated virus (GKaV) and Lychnis mottle virus (LycMoV) were detected for the first time in the Western Hemisphere. Incidence ranged from a few plants for ALiMMV to near universal infection for CNSV. GKaV was found in individuals that were infected with Lemoine’s disease …

Holt & Plyler (1984) Checklist Of The Vascular Flora Of The Robert B. Gordon Natural Area, Jack Holt, Jim Plyler

Gordon Natural Area Baseline Plant Survey Documents

This research represents the first site-wide floristic survey of the Gordon Natural Area (GNA), and consists of 348 species in 238 genera and 95 families. The survey was conducted by two West Chester University undergraduate students, Jack Holt and Jim Plyler, under the supervision of Dr. William Overlease. The bulk of the work took place during 1984; however, some woody species previously noted in the GNA by Jim Plyler were also incorporated into the list. The checklist was compiled for all vascular families encountered at the GNA, with the exception of the Grass Family (Poaceae), Rush Family (Juncaceae), and Sedge …

The Prairie Naturalist, Vol. 52, Issue 2, December 2020

The Prairie Naturalist

Comparing Native Bee Communities on Reconstructed and Remnant Prairie in Missouri • Joseph LaRose, Elisabeth B. Webb, and Deborah Finke

Patterns and Potential Causes of Changing Winter Bird Distributions in South Dakota • David L. Swanson, Reza Goljani Amipkhiz, and Mark D. Dixon

Greater prairie-chickens and sharp-tailed grouse have similarly high nest survival in the Nebraska Sandhills • Larkin A. Powell, Walter H. Schacht, Julia P. Ewalt, and Katie R. McCollum

Captive Ring-necked Pheasant Response to Very High Experimental Doses of Lead • Travis J. Runia and Alex J. Solem

Trends in a Greater Prairie Chicken Population Established by Translocation …

Genomic Selection Of Forage Agronomic Traits In Winter Wheat, Frank Maulana, Ki-Seung Kim, Joshua D. Anderson, Mark E. Sorrells, Twain J. Butler, Shuyu Liu, P. Stephen Baenziger, Patrick Byrne, Xue-Feng Ma

Department of Agronomy and Horticulture: Faculty Publications

Genomic selection (GS) can improve genetic gain of complex traits in plant breeding. Phenotyping agronomic traits of winter wheat (Triticum aestivum L.) for dualpurpose use is expensive and time-consuming. In this study, we compared the prediction accuracies of four GS models (RR-BLUP, GBLUP, GAUSS, and BL) for forage yield (FY), plant height (PH) and heading date (HD) of the hard winter wheat diversity panel (n = 298) using random and stratified sampling methods. In addition, we determined the appropriate training population (TP) size and marker density for GS of the traits. Moderate to high prediction accuracies ranging from 0.66 …

Reducing Mowing Requirements In Home Lawn And Golf Course Turfgrass, Mark A. Keck

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Turfgrass systems are routinely managed by frequent mowing to increase aesthetics and function. Mowing is resource intensive with a high labor and energy demand. Reducing the number of mowings events in a growing season will decrease the labor and energy but may reduce quality as well. Previous work has looked at reducing mowing by changing the frequency and by using a plant growth regulator (PGR). Limited information is available about how to reduce mowing while maintaining acceptable quality. We looked at two different management practices to reduce mowing and maintain quality. The first study evaluated seven different mowing frequencies at …

Evaluating The Impact Of Grafting On Local Tomato Production In Nebraska, Raihanah Hassim

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Vegetable grafting has been known to improve plant production under both biotic and abiotic stresses. With an increase in interest among local growers towards grafting production, it is important to provide enough vegetable grafting information. Therefore, the objective of this study is to assess the impact of grafting, rootstock cultivar, and local conditions and management on the yield and quality of tomato across the diverse growing and environmental conditions, specifically in Nebraska. Three open-field and one limited growing condition study were conducted between 2018 and 2019 across Nebraska. In the open-field trial, two determinant fresh market tomatoes, ‘Nebraska Wedding’ and …

Fine-Scale Patterns Of Genetic Structure In The Host Plant Chamaecrista Fasciculata (Fabaceae) And Its Nodulating Rhizobia Symbionts, Mahboubeh Hosseinalizadeh Nobarinezhad, Lisa A. Wallace

Biological Sciences Faculty Publications

In natural plant populations, a fine-scale spatial genetic structure (SGS) can result from limited gene flow, selection pressures or spatial autocorrelation. However, limited gene flow is considered the predominant determinant in the establishment of SGS. With limited dispersal ability of bacterial cells in soil and host influence on their variety and abundance, spatial autocorrelation of bacterial communities associated with plants is expected. For this study, we collected genetic data from legume host plants, Chamaecrista fasciculata, their Bradyrhizobium symbionts and rhizosphere free-living bacteria at a small spatial scale to evaluate the extent to which symbiotic partners will have similar SGS …

Influence Of Burning And Grazing Management Practices On Subirrigated Sandhill Meadow Hay Production, Tara M. Harms

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Subirrigated meadows are a valuable forage resource to Sandhills ranching operations being used for hay production, grazing, or a combination of both. Practices that sustain meadow productivity should be encouraged to ensure a consistent feed supply for cattle. The potential influence of prescribed burning or pre-freeze and post-freeze grazing on forage production and quality are not well understood on these meadows. In grasslands, including meadows, excess dead plant material can accumulate, causing a potential reduction in forage yield and quality. Results of our three-year field study suggest that burning meadows in the spring is a suitable management option to remove …

Fungicide Resistance: Surveillance, Risk Assessment And Evolution In Two Soil-Borne Pathogens, Nikita Gambhir

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Fungicide-resistant pathogens are an increasing threat to fungicide efficacy and plant health. The goal of this dissertation was to advance the foundational knowledge required to prevent and detect fungicide resistance development in the seedling disease pathogen, Rhizoctonia zeae and the white-mold pathogen, Sclerotinia sclerotiorum. Corn and soybean fields in 12 states (Iowa, Illinois, Indiana, Kansas, Kentucky, Michigan, Minnesota, Missouri, North Dakota, Nebraska, South Dakota, and Wisconsin) were surveyed for R. zeae. In vitro fungicide sensitivity was determined for 91 isolates to fludioxonil, sedaxane, and/or prothioconazole. Rhizoctonia zeae was sensitive to all fungicides (EC₅₀ < 3 µg/ml) except azoxystrobin (EC₅₀ > 100 µg/ml). In …

Evaluating The Untapped Potential Of U.S. Conservation Investments To Improve Soil And Environmental Health, Andrea Basche, Katherine Tully, Nora L. Alvarez-Berrios, Julian Reyes, Laura Lengnick, Tabitha Brown, Jennifer M. Moore, Rachel E. Schattman, Lana Koepke Johnson, Gabrielle Roesch-Mcnally

Department of Agronomy and Horticulture: Faculty Publications

There is increasing enthusiasm around the concept of soil health, and as a result, new public and private initiatives are being developed to increase soil health-related practices on working lands in the United States. In addition, billions of U.S. public dollars are dedicated annually toward soil conservation programs, and yet, it is not well quantified how investment in conservation programs improve soil health and, more broadly, environmental health. The Environmental Quality Incentives Program (EQIP) is one of the major U.S. public conservation programs administered on privately managed lands for which public data are available. In this research, we developed a …

False Cypress -- Hinoki, Grace Flynn

BIO 140 Arboretum Project

In this semester my class and I in Biology Lab 140 chose one tree to document. The tree that I chose was the False Cypress-Hinoki. This tree was located in front of Misto Gatehouse. Every week I would take pictures of my tree and document changes I had noticed. Throughout the class I was able to see the changes that occurred to my tree.

A Survey Of Leaf Venation In New Caledonian Syzygium (Myrtaceae), Jiawei Xu Montojo

Electronic Theses & Dissertations

New Caledonia is a globally recognized biodiversity ‘hotspot’ characterized by a rich flora and a large number of endemic species. Syzygium Gaertn., the largest genus of woody plants in the world, is common in New Caledonia with approximately 70 species. A comparative survey of leaf morphology and architectural traits among 27 species of New Caledonian Syzygium was conducted, focusing on leaf venation patterns. Separate and detailed descriptions of leaf morphology and leaf venation characters are provided for the species. In addition to morphological differences, this study found differences at the species level among characters such as the number of intramarginal …