Agronomy and Crop Sciences Commons^™

Evaluating The Impact Of Intercropping Vegetables And Cut Flowers On Yield And Conservation Biological Control, Alliance Igiraneza

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Specialty crops such as vegetables are some of the most susceptible to yield losses and increased management difficulty over time due to pests. One of the potential solutions to this problem, which aims at ensuring the sustainability of the sector, is using conservation biological control practices such as intercropping to increase diversity, while maintaining the economic feasibility and profitability of the system. This study was conducted to evaluate the impact of this management practice using Bell pepper (Capsicum annuum var. King Arthur) as the main crop, intercropped with flowers including zinnia (Zinnia elegans var. Benary’s Giant), sunflower ( …

Cis-Variant Gene-Expression Association Analysis: A Targeted Approach To Identify Functional Cis-Regulatory Variation, Sofiya Arora

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Phenotypic diversity in plants is largely driven by changes in gene function arising from mutations in both the coding and regulatory regions. Regulatory variation is particularly pervasive because it can fine-tune gene expression without disrupting protein function and is therefore less likely to be strongly selected against in natural populations. As a result, it has played a central role in evolution and domestication. In our previous genome-wide eQTL mapping study in maize, nearly two-thirds of the expressed genes were found to harbor detectable cis-expression quantitative trait loci (cis-eQTLs) with strong local effects on gene expression. Though these cis-variants are widespread, …

Target-Site Resistance To Glyphosate In Eleusine Indica Biotypes From South Sulawesi And Lampung, Indonesia, Ahmad Nur Lazuardi, Denny Kurniadie, Uum Umiyati, Ryan Widianto

Jurnal Kultivasi

Glyphosate is a non-selective systemic herbicide that has been widely used to control weeds by local corn farmers in South Sulawesi and Lampung Provinces of Indonesia. However, some corn farmers in these two regions were considered that glyphosate herbicide at the standard field dose no longer effective against goosegrass (Eleusine indica). To confirms the level of its resistance to glyphosate, seeds of E. indica suspected to be glyphosate-resistant were collected from corn fields in Soppeng Regency-South Sulawesi and South Lampung Regency-Lampung (designated as GR-1 and GR-2 respectively), along with a known susceptible biotype from Sumedang Regency-West Java (GS) as a …

The Effect Of Liquid Foliar Fertilizer And Pruning Combinations On The Growth Of Productive Phase Arabica Coffee Plants (Coffea Arabica L.), Syifa Djuita Putri, Alvito Krishna Balapradhana, Mira Ariyanti, Intan Ratna Dewi Anjarsari, Yudithia Maxiselly

Jurnal Kultivasi

In recent years, productivity decline in arabica coffee has become a real issue in Indonesia. This decay has been brought about by various external and internal factors that are beyond human control. Various factors, including suboptimal cultivation practices, take part in this process. The objective of the present study was to evaluate the effect of pruning combined with foliar fertilizer application (coconut water and sugarcane molasses) and 6-benzylaminopurine (BAP) on the vegetative growth of arabica coffee plants during the production phase. The research was conducted at Ciparanje Experimental Field, Universitas Padjadjaran, using a randomized complete block design with seven treatments …

Discovering The Genetics Underlying Speciation Traits In Heuchera (Coral Bells), Tajinder Singh

Honors Theses

Hybridization is a key evolutionary mechanism for generating biological diversity, ultimately shaping diversification and adaptation of plant lineages in natural and agroecosystems.  Our understanding of the frequency, distribution, and significance of hybridization is rapidly increasing, but the external driving forces that dictate why certain species hybridize, and others do not remain obscure. The physical traits that shape gene flow and trait sharing among species are likely to be among the key factors that directly control hybridization. Gene flow in most plants is mediated by pollinating insects and thus by pollination syndromes, which are suites of floral traits that have evolved …

Growth And Yield Response Of Shallots To Npk, Nk, And Humic Acid Under Different Mycorrhiza Application, Alfu Laila, Endang Sulistyorini

Jurnal Kultivasi

One strategy to increase shallot production is the utilization of microorganisms in the soil, such as arbuscular mycorrhizal fungi (AMF), which is applied together with fertilizer. This research aimed to investigate the effects of different nutrient inputs and mycorrhizal association on the growth and yield of shallots. This study used a split-plot design with three replications as blocks. The main plot included four treatments: no nutrient inputs, NPK fertilizer, NK fertilizer, and humic acid, while the subplot involved the mycorrhiza application (with or without). The measured variables included growth (plant height and number of leaves) and yield (fresh weight and …

Response Of Chlorophyll, Morphology, And Yield Of Several East Java Superior Soybean (Glycine Max L.) Varieties To Levels Of Salinity, Puji Lestari Tarigan, Ida Retno Moeljani, Fadila Suryandika, Hadi Munarko

Jurnal Kultivasi

Soybean production has been extended to saline areas. This development is a strategy to expand planting areas to suboptimal land to increase worldwide production. To support cultivation in these locations, it is necessary to develop superior varieties that are resistant to salinity and provide supporting technological inputs. In saline conditions, soybeans may face stress that leads to morphological, physiological, and yield disturbances. Consequently, the response of several soybeans in East Java should be observed. This study is a pot experiment and arranged in a Factorial Completely Randomized Design (CRD) consisting of two factors, soybean varieties and NaCl concentrations. The treatments …

Growth Response And Yield Performance Of Upland Rice Intercropped With Legumes, Sevirasari, Wilujeng Hidayati, Zulfa Az Zahroh, Bayu Febriansyah, Marifatul Apri Fiana, Nabilla Najwa Rochmaniah, Khavid Faozi, Lafi Na'imatul Bayyinah, Joko Maryanto, Ahmad Fauzi

Jurnal Kultivasi

Intercropping patterns in upland rice must be carefully managed to prevent excessive competition among crops. This research aimed to determine the ideal proportion of upland rice–legume intercropped and legume types for rice growth and yield. The research was conducted in Mersi, East Purwokerto, Banyumas, Central Java, from April–August 2025. The study was arranged in a split-plot design consisting of a main factor in form of the proportion of upland rice to legumes (1:1, 2:1, and 3:1), and a sub-factor, i.e., legume types (peanuts, mung beans, and soybeans). The data were analyzed using Analysis of Variance and Tukey's HSD test at …

Silage Sorghum Variety Trial: Broome 2023-2024 Wet Season, Carla Milazzo, Aimee Grieves, Christopher Ham, Geoff Moore

Grain and other field crops research reports

Seven sorghum varieties suitable for silage production were planted at the start of the wet season when high temperatures and increasing day length promoted rapid growth.

Late maturing varieties were the highest yielding – producing up to 44 t/ha dry matter over 125 days.

Metabolisable energy content increased as plants matured to the soft dough growth stage, to 8.5 MJ/kg dry matter, falling short of the target 10 MJ/kg for high liveweight gains in cattle.

Effects Of Soil Amelioration On Wheat Growth, Nutrition, And Soil Microbiome Dynamics In Sandy Soil, Shompa Akter, Sultan Mia, M. Asaduzzaman Prodhan, Gaus Azam, Zakaria Solaiman, Kadambot H M Siddique

Grain and Other Field Crops Research Articles

Purpose Cropping regions in Western Australia (WA) face multiple soil constraints including acidity, nutrient deficiencies, compaction and water repellence, which limit crop productivity. Developing sustainable soil management strategies is therefore crucial. This study evaluates the effects of soil amendments—lime, gypsum, clay, compost, and synthetic fertilisers on soil health, nutrient availability, microbial function and wheat production. Methods A glasshouse experiment was conducted using undisturbed soil cores collected in a polyvinyl chloride (PVC) column from a field trial site where four treatments were applied: Control (no amendment), CLG (clay, lime, gypsum), CLG + NPK (CLG + nitrogen, phosphorus, and potassium fertilisers), and …

Effects Of Spatially Targeted Fertilizer Strategies On Canopy Growth Across Contrasting Tart Cherry Orchard Sites, Kurt Wedegaertner, Brent Black, Matt Yost, Grant Cardon

Plants, Soils and Climate Student Research

Variable-rate fertilization is increasingly promoted in perennial orchard systems, but its effectiveness remains difficult to predict because tree responses are often inconsistent and strongly conditioned by site-specific constraints. To address this, we evaluated soil-based and vigor-based zoning frameworks across four commercial tart cherry (Prunus cerasus) orchards representing contrasting soil conditions, canopy structures, and management histories. Within each orchard, management zones were defined using either soil apparent electrical conductivity (ECa) or satellite-derived canopy vigor. Fertilization strategies were implemented by varying fertilizer application timing among zones using split-application approaches while maintaining a constant total fertilizer rate. Tree-level canopy structure was …

Evaluating Differences In The Dynamic Growth Patterns Of Cvi And Ler Genetic Strains Of Arabidopsis During Seedling Establishment, Emily Frost

Undergraduate Research Symposium (2026- )

Seedling establishment is the process by which seedlings transition from depending on seed nutrients to making their own through photosynthesis. An important aspect is photomorphogenesis, the growth of plants in response to light, transitioning from rapid embryonic stem growth to a slower rate focused on root growth and leaf formation. The process is influenced by many genetic and environmental factors, making better characterization essential to understand plant development. For our research, we examined the dynamic growth of two Arabidopsis genetic strains (Cvi and Ler) over time in response to darkness, then to the change in response when light is introduced. …

Weed Seed Burial And Long-Term Viability Following Soil Inversion, Catherine Borger, Sultan Mia, Gaus Azam, Stephen Davies

Grain and Other Field Crops Research Articles

Strategic soil inversion is advocated as a periodic weed management strategy, typically recommended every 4 to 8 yr if the goal is to delay the evolution of herbicide resistance. It is assumed that the weed seeds buried during the inversion process will lose viability during this period. However, long-term seedbank persistence following soil inversion has not been investigated. If the buried seeds retain viability, subsequent inversions or other deep-tillage operations may return them to the soil surface, potentially replenishing the weed seedbank. The current study identified 30 sites within the wheatbelt of Western Australia (in 2020) that had previously been …

Soil Nutrient Sufficiency Does Not Ensure Plant Nutrient Status, Chandralekha Joga Miss

Scholars Week

Soil testing is commonly used to guide nutrient management. However, plants may not use nutrients in the same way that soil tests predict. This can happen when nutrients interact and limit uptake. This study evaluated whether soil test results match plant nutrient status under different compost levels, with a focus on nutrient antagonism. Soils from three compost histories were used: no compost (T1), moderate compost (T2), and long-term high compost from repeated hog manure application (T3). Soils were mixed with ProMix and Perlite (1:1:1), and Chijimisai was grown under greenhouse conditions. Plant height and chlorophyll (SPAD) were measured weekly. Soil …

Comparing Effects Of Crop Rotation And Continuous Monocropping On Soil Chemical Properties: A Review Of Agricultural Practices In The U.S. Corn Belt, Shiba Hari Dhakal Shiba

Scholars Week

Soil chemical health is critical for sustaining long-term agricultural productivity in the U.S. Corn Belt, yet continuous monocropping of corn poses persistent challenges to soil organic matter, soil organic carbon, nutrient balance, and pH stability. This review synthesizes findings from long-term field studies to compare the impacts of crop rotation and continuous monocropping on soil organic matter (SOM), soil organic carbon (SOC), nutrient availability, and soil pH across the Corn Belt. Results consistently show that crop rotation enhances SOM and SOC through increased residue input, diverse root systems, and improved microbial activity, whereas continuous monocropping accelerates organic matter decomposition and …

Agronomic Practices For Climate-Resilient Okra Production In Agroecological Systems: A Review, Samuel Mathu Ndungu, Lokeshwar Kesamreddy, Mathieu A.T. Ayenan, Stephen Othim, Siyabusa Mkuhlani, Yu Hsiang Liu, Amha Besufkad, Wubetu Bihon Legesse, Eric C. Legba, Judith Honfoga, Lukas Pawera

All Peer-Reviewed Publications

Okra is increasingly recognized as a climate-resilient crop within diversified agroecological systems; however, an integrated synthesis of its biophysical, agronomic, and socioeconomic dimensions is lacking. This review consolidates the current knowledge on okra physiology, production ecology, and value chains, with a focus on climate resilience under heat, drought, salinity, pest, and disease pressures. Evidence across regions demonstrates that agroecological practices such as crop diversification, mulching, conservation tillage, integrated pest management, and the use of organic and biological inputs consistently improve soil health, stabilize yields under climatic stress, and reduce dependence on external inputs, although with trade-offs in labor demand and …

Production Of Black And Navy Beans In Virginia, Harbans L. Bhardwaj, Satya S. S. Narina Ph.D.

Virginia Journal of Science

An urgent need exists in Virginia and adjoining states to identify crops to replace declining tobacco acreage. Although not traditionally grown in the region, dry beans (Phaseolus vulgaris L.) have considerable potential as alternative summer crops due to their nutritional benefits and increasing consumer demand. Information on the production potential of these crops in Virginia, however, is not yet available. To remedy this situation, replicated field trials were conducted over three years with six black and four navy bean varieties to characterize grain yields following three row spacings and three planting times. Black beans significantly out-yielded navy beans (2095 …

Arkansas Cotton Variety Tests 2025, F. Bourland, J. Gann, B. Lovelady, B. Guest Jr, J. Mcalee, L. Martin, Z. Treadway, C. Henderson

Arkansas Agricultural Experiment Station Research Series

The primary goal of the Arkansas Cotton Variety Tests is to provide unbiased data regarding the agronomic performance of cotton varieties and advanced breeding lines in the major cotton-growing areas of Arkansas. This information helps seed companies establish marketing strategies and assists producers in choosing varieties to plant. These annual evaluations will then facilitate the inclusion of new, improved genetic material in Arkansas cotton production. Adaptation of varieties is determined by evaluating the lines at five University of Arkansas Division of Agriculture research sites (Manila, Keiser, Judd Hill, Marianna, and Rohwer). The tests at Rohwer were abandoned due to undefined …

Perceived Barriers To Integrated Crop–Livestock Systems: Evidence From A Nebraska Producer Survey, Omid Tarashtwal

Department of Agricultural Economics: Dissertations, Theses, and Student Research

Integrated crop-livestock systems offer agronomic, economic, and environmental benefits, yet reintegration has been slow across the Northern Great Plains despite sustained interest. Existing research has documented barriers to transition conceptually, but quantitative evidence on which barriers producers perceive as most important and which producer and operation characteristics are associated with stronger barrier perceptions remains limited. This thesis addresses that gap using data from the 2023 Nebraska Agriculture Operator Survey.

The analysis focuses on 241 Nebraska producers, including 179 crop-only and 62 livestock-only operations. Seven models are estimated, combining ordered logit estimation for single-item barriers with linear regression for averaged barrier …

International Rice Outlook: International Rice Baseline Projections 2025-2035, A. Durand-Morat, W. Mulimbi

AAES Research Reports and Research Bulletins

• Over the next ten years, global rice consumption is projected to exceed global rice production, making existing stocks crucial for meeting the global rice market demand. • Global production is projected to grow mostly due to productivity gains and some area expansion, with India’s production performance becoming more relevant. • The global rice consumption is projected to climb, driven mainly by population growth. The average global per capita rice consumption is expected to drop slightly over the next decade, primarily due to slower per capita consumption growth in Asia and Africa. • The international prices of long-grain and medium-grain …

Assessment Of Precision Rangeland Management Tools In The Nebraska Sandhills, Hannah K. Allen

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The objective of this thesis is to evaluate tools and management strategies that contribute to rangeland monitoring and livestock distribution in heterogeneous grassland systems of the Nebraska Sandhills. Chapter one reviews relevant literature related to precision livestock management, the Nebraska Sandhills, biomass estimation, and pyric herbivory. The second chapter evaluates the use of fractional green canopy cover (FGCC) derived from the Canopeo mobile application as a rapid method for estimating aboveground biomass in Sandhills rangelands. Biomass samples were collected across topographic positions in both early and late growing season, and relationships between FGCC and clipped biomass were assessed using generalized …

Genome Wide Association Study (Gwas) On Different Economic Traits And Epigenetic Stability Of Sweetpotato In Louisiana, Ajay Dhungana

LSU Doctoral Dissertations

Sweetpotato [Ipomoea batatas (L.) Lam] is a globally important food, feed, and industrial crop, yet its improvement is constrained by a complex hexaploid genome, clonal propagation, and susceptibility to multiple diseases. In Louisiana, production is threatened primarily by Fusarium oxysporum f. sp. batatas (Fusarium wilt) and Ceratocystis fimbriata (Black rot). Furthermore, the in vitro propagation methods essential for disease-free planting material and germplasm conservation can introduce epigenetic instability that undermines clonal fidelity. This dissertation integrates genome-wide association studies (GWAS), genotype by environment interaction (GEI) and DNA methylation profiling to dissect resistance mechanisms and assess epigenetic stability in Louisiana sweetpotato …

The Nexus Between Perceived And Scientific Weather Patterns And Its Effects On Cereal Crop Production In Manyoni District, Tanzania, Fadhili Lufunyo Ngajilo, Helena Elias Myeya, Evarist Fundisha Swai

Journal of Humanities and Social Sciences

This study examines the nexus between perceived and scientific weather patterns, and its effects on cereal crop production in Manyoni District; and involved 157 participants. Both quantitative and qualitative data were collected through a mixed methods research approach. The data were collected through a household survey, FGDs, in-depth interviews and documentary review methods for triangulation and complementarity purposes. The quantitative data were analysed through descriptive and inferential statistics with IBM SPSS (version 27) and Microsoft Excel Office (version 2007). The results indicate that smallholder farmers perceived that rainfall had been fluctuating with increasing trends, while temperature and wind had been …

Vertical Price Transmission In The Philippine Rice Supply Chain: Responses To Shocks In The Post-Tariffication Period, Bates Bathan

The Philippine Agricultural Scientist

In the post-Rice Tariffication Law (RTL) period, several protectionist policies and state interventions have reemerged in the Philippine rice market. Using national-level time series data from January 2018 to April 2025, the study applies autoregressive distributed lag models to assess the impact of policy changes and external shocks on unmilled rice (palay) and rice prices. Results show that National Food Authority (NFA) rice stocks significantly affect palay farmgate prices and special rice retail prices. Vertical price transmission flows from farmgate to wholesale levels for special rice, and from wholesale to retail levels for well-milled and regular-milled rice. Major …

The Dual Nature Of Weedy Rice (Oryza Sativa F. Spontanea): From A Noxious Weed To An Important Genetic Resource For Rice Improvement, Rica M. Rentino, Vanessa Sernicula, May O. Palanog, Roselyn G. Alfetche, Dan Michael A. Angay, Francis L. Tejada, Dexter G. Balboa, Shaireen M. Angay, Fatima-Nasra A. Sahadain, Teodora E. Mananghaya, Karl Vincent J. Jose, Liezel C. Llanes, Jonathan M. Niones, Karla Mae R. Nonog, Frodie F. Waing, Leonilo Gramaje, Albert Christian S. Suner, Ommal H. Abdulkadi, Norvie L. Manigbas, Jose E. Hernandez, Alvin D. Palanog

The Philippine Agricultural Scientist

Weedy rice (Oryza sativa f. spontanea) is becoming a serious threat to rice production in the Philippines, especially in direct-seeding rice areas, owing to its high competitiveness and its similarity to cultivated rice in morphology and ecological requirements. However, weedy rice can be considered both a threat that endangers rice production and an opportunity, as it offers a potential source of novel genes for rice improvement. This study evaluated the extent of weedy rice infestation in direct-seeding areas in the Visayas, measured the phenotypic and genotypic diversity of collected weedy rice ecotypes using simple sequence repeat (SSR) markers, and …

Improvement Of Forage Productivity By Intercropping Pakchong 1 And Napier Grass With Mungbean And Soybean In Los Baños, Laguna, Philippines, Paul Joshua C. Marquez, Eureka Teresa M. Ocampo, Menandro M. Loresco, Lourdes S. Edano Ma, Agapita J. Salces

The Philippine Agricultural Scientist

Forage demand is rising in the Philippines, and to sustainably boost agronomic performance, the beneficial impact of intercropping was investigated. This study characterized the performance of high-yielding forages, namely Napier grass (NG) and Pakchong 1 (PK), when intercropped with soybean (SB) and mungbean (MB) under rain-fed conditions in Los Banos, Laguna. The experiment was conducted in a repeated-measures RCBD replicated 3 times with grass species and cropping system as main factors, resulting in the following treatment combinations: Sole NG, Sole PK, NGSB, NGMB, PKSB, and PKMB. Grasses were ratooned, legumes were harvested, and legume seeds were re-sown every 45 to …

Improvement Of Forage Productivity By Intercropping Pakchong 1 And Napier Grass With Mungbean And Soybean In Los Baños, Laguna, Philippines, Paul Joshua C. Marquez, Eureka Teresa M. Ocampo, Menandro M. Loresco, Ma Lourdes S. Edano, Agapita J. Salces

The Philippine Agricultural Scientist

Forage demand is rising in the Philippines, and to sustainably boost agronomic performance, the beneficial impact of intercropping was investigated. This study characterized the performance of high-yielding forages, namely Napier grass (NG) and Pakchong 1 (PK), when intercropped with soybean (SB) and mungbean (MB) under rain-fed conditions in Los Banos, Laguna. The experiment was conducted in a repeated-measures RCBD replicated 3 times with grass species and cropping system as main factors, resulting in the following treatment combinations: Sole NG, Sole PK, NGSB, NGMB, PKSB, and PKMB. Grasses were ratooned, legumes were harvested, and legume seeds were re-sown every 45 to …

Heterosis For Flowering Time And Leaf Traits In F1 Hybrids From Desi And Kabuli Chickpeas [Research Note], Gizem Kamçi, Behiye Tuba Biçer

The Philippine Agricultural Scientist

The study was conducted at the Faculty of Agriculture in Dicle University, Southeast Anatolia, Türkiye, during the 2023 growing season to estimate heterosis, heterobeltiosis, and dominance for phenological, leaf, and plant traits in F₁ hybrids from desi × kabuli and kabuli × kabuli chickpea crosses. In 2022, 2 desi (Black, ICCV 10) and 3 kabuli (Azkan, ILC 533, ILC 482) chickpea varieties were crossed, producing 10 hybrids and 5 parents evaluated in a randomized complete block design with 3 replications. Significant variation was found among genotypes for all traits. Days to first flowering ranged from 55.7 to 69.0 d, with …

Heterosis For Flowering Time And Leaf Traits In F1 Hybrids From Desi And Kabuli Chickpeas [Research Note], Gizem Kamçi, Behiya Tuba Biçer

The Philippine Agricultural Scientist

The study was conducted at the Faculty of Agriculture in Dicle University, Southeast Anatolia, Türkiye, during the 2023 growing season to estimate heterosis, heterobeltiosis, and dominance for phenological, leaf, and plant traits in F₁ hybrids from desi × kabuli and kabuli × kabuli chickpea crosses. In 2022, 2 desi (Black, ICCV 10) and 3 kabuli (Azkan, ILC 533, ILC 482) chickpea varieties were crossed, producing 10 hybrids and 5 parents evaluated in a randomized complete block design with 3 replications. Significant variation was found among genotypes for all traits. Days to first flowering ranged from 55.7 to 69.0 d, with …

Evaluation Of Publicly Available Maize Germplasm Adaptation To Environments In Nebraska, Garrett Snodgrass

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Publicly available maize germplasm represents an important resource for breeding programs seeking to expand genetic diversity and improve hybrid performance. However, effective use requires characterization of per se phenotypic performance of parental lines and evaluation of the parental line’s hybrid progeny adaptation to a given target population of environments. Furthermore, understanding population structure and heterotic grouping is imperative for maximizing efficiency of breeding decisions. The objectives of this study were to (1) evaluate phenotypic performance of parental lines and hybrids across environments in Nebraska, and to (2) refine heterotic group classification of parental lines within the University of Nebraska-Lincoln’s Hybrid …