Other Life Sciences Commons^™

Legacy Effects Of Habitat Degradation By Lesser Snow Geese On Ground-Nesting Savannah Sparrows Along The Hudson Bay Lowlands, Stephen L. Peterson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Little is known of the direct and indirect legacy of Lesser Snow Goose (LSGO) habitat degradation in northern Canada on the biodiversity of other avian species. It is believed that a human-induced trophic cascade caused in part by agricultural habitat modification along migratory routes and wintering grounds has contributed to the increase in LSGO numbers, which has resulted in increased foraging pressure by LSGO on northern breeding and stopover sites. This habitat degradation may lead to decreased abundance and richness of Arctic / sub-Arctic avian species across landscapes that LSGO utilize and degrade.

Here we evaluated the annual change in …

Mule Deer And Wildlife Crossings In Utah, Usa, Megan Schwender

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Wildlife-vehicle collisions (WVCs) negatively impact wildlife populations and create dangerous driving situations for motorists. In Utah, USA, mule deer (Odocoileus hemionus) encounter a variety of hazards as they attempt to cross highways and interstates, some of which are 8 lanes wide. Agencies have sought to mitigate the risks posed to drivers and mule deer by building crossing structures for wildlife. The objectives of this study were to evaluate the effectiveness of crossing structures in Utah to safely pass mule deer under highways and to determine the variables that best explain mule deer passage use. From 2008 - 2011 …

Effects Of Inorganic Nutrients And Dissolved Organic Carbon On Oxygen Demand In Select Rivers In Northern Utah, Joseph L. Crawford

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Our nation’s waterways are a valuable resource whose quality is influenced by their surroundings as well the amount of nutrients (largely nitrogen and phosphorus) in the water. Nutrients play an important role in aquatic ecosystems; however, if nutrient levels become too high, it is detrimental to water quality. Excess fertilizer that runs off of agricultural land and into the rivers and streams is a common source of nutrients in our waterways. Other sources of nitrogen and phosphorus include effluent released from wastewater facilities.

There are many negative side effects of high nutrients in the water. They can create large algal …

Effects Of Age On Induced Glaucoma In An In Vivo Rat Model, Robert Cox

Honors Theses

Previous in vitro studies from this lab have demonstrated that injection of a hypertonic saline solution into the episcleral vein of the rat’s eye mimics the effect of glaucoma. However, the age of the rat related to the amount of cell loss in the retina ganglion cell (RGC) layer is unknown. To address this issue, we propose to analyze the correlation of age and cell loss between 3-6 month and 1-year-old Long Evan rats. When inducing glaucoma in the Long Evan rats, the left eye in each rat was left untreated and used as an internal control. In the right …

Intraocular Pressure Measurements In A Rat Glaucoma Model, Michael Doyle

Honors Theses

The main objective of this study was to determine if consistent intraocular pressure (IOP) measurements could be obtained from an in vivo Long Evans rat glaucoma model. An increase in IOP is the primary risk factor associated with glaucoma and reliable IOP measurements would validate our in vivo glaucoma model that we are inducing in rats. The study used nine Long Evans rats. Three rats severed as controls, three received surgery to induce glaucoma and three were administered PNU-282987 neuroprotective eye drops and then surgery to induce glaucoma. IOP measurements were obtained by tapping the retina of the rat eye …

Pbl Waste Not Want Not: Using Agricultural Plant Waste, Illinois Mathematics And Science Academy

Teacher Resources

This sample Problem Based Learning (PBL) lesson focuses on the best use for agricultural waste, using an apple orchard as the hypothetical problem. The unit is designed as a sample curriculum for educators learning the PBL process.

Journey To The End Of The Earth: Analyzing The Outcomes Of A Field-Based Research Program In Antarctica, William Robertson, Claudia Garcia

Selected Works Temporary Series

With the need to increase minority representation in science, specifically in polar science research, the University of Texas at El Paso (UTEP) developed an innovative field research experience entitled the International Polar Year- Research and Educational Opportunities in Antarctica for Minorities (IPY-ROAM). Supported by a National Science Foundation (NSF) grant, twenty-eight participants including undergraduate students, graduate students, teachers and university faculty completed a semester long online course and performed field research in Antarctica within the areas of aquatic ecology, terrestrial biology, physical science, ecotourism and education. The purpose of this article is to determine possible outcomes that individuals experienced through …

Candida Albicans Czf1 And Efg1 Coordinate The Response To Farnesol During Quorum Sensing, White-Opaque Thermal Dimorphism, And Cell Death, Melanie L. Langford, Jessica C. Hargarten, Krista D. Patefield, Elizabeth Marta, Jill R. Blankenship, Saranna Fanning, Kenneth W. Nickerson, Audrey L. Atkin

Kenneth Nickerson Papers

Quorum sensing by farnesol in Candida albicans inhibits filamentation and may be directly related to its ability to cause both mucosal and systemic diseases. The Ras1-cyclic AMP signaling pathway is a target for farnesol inhibition. However, a clear understanding of the downstream effectors of the morphological farnesol response has yet to be unraveled. To address this issue, we screened a library for mutants that fail to respond to farnesol. Six mutants were identified, and the czf1/czf1 mutant was selected for further characterization. Czf1 is a transcription factor that regulates filamentation in embedded agar and also whiteto- opaque switching. We found …

Journey To The End Of The Earth: Analyzing The Outcomes Of A Field-Based Research Program In Antarctica, William Robertson, Claudia Garcia

Departmental Papers (TE)

With the need to increase minority representation in science, specifically in polar science research, the University of Texas at El Paso (UTEP) developed an innovative field research experience entitled the International Polar Year- Research and Educational Opportunities in Antarctica for Minorities (IPY-ROAM). Supported by a National Science Foundation (NSF) grant, twenty-eight participants including undergraduate students, graduate students, teachers and university faculty completed a semester long online course and performed field research in Antarctica within the areas of aquatic ecology, terrestrial biology, physical science, ecotourism and education. The purpose of this article is to determine possible outcomes that individuals experienced through …

Bioactive Natural Products, A. Hamid A. Hadi, Mehmet Emin Duru, Ana Belen Martin-Diana

Other resources

Bioactive natural products have never ceased to play an important role in the search of novel therapeutic agents. Natural products from the nature such as the plant and marine sources form an integral part of the living system, and they have existed ever since the beginning of life. Therefore, it is undeniable that works related to natural products continue to develop in many aspects involving researchers from various scientific backgrounds. This special issue is dedicated to compile twelve articles on chemical and biological aspects of research developments in natural products.

Los Hongos Comestibles De La Región De Molango De Escamilla, Hidalgo, México, Miriam Jiménez-González, Leticia Romero-Bautista, Miguel Ángel Villavicencio-Nieto, Blanca Estela Pérez-Escandón

Estudios científicos en el estado de Hidalgo y zonas aledañas

Se realizaron 28 salidas a la región de Molango de Escamilla entre los años 2004-2006, en la temporada de lluvias con el fin de obtener los cuerpos fructíferos de los hongos que son consumidos en la región, así como recopilar los nombres comunes e identificar las especies. Se aplicaron entrevistas estructuradas, semiestructuradas y abiertas. Se identificaron 19 especies y en este trabajo se describen 13. Las especies comestibles mayormente consumidas fueron Pleurotus djamor, Cantharellus odoratus, Armillaria tabescens, Polyporus alveolaris y Amanita tecomate. Se reporta por primera vez en la región el uso comestible de Russula cessans, Russula virescens, Russula aff. …

Differential Gene Expression Patterns In Hpv-Positive And Hpv-Negative Oropharyngeal Carcinomas, Swati Tomar

Theses and Dissertations

Head and neck (HN) cancer is the fifth most prevalent malignancy worldwide with 90% of them categorized as squamous cell carcinomas (SCC). Carcinomas of the oropharynx, pharynx and the oral cavity, comprise a subset of HNSCC and are referred to as oropharyngeal squamous cell carcinomas (OPSCC). Up to 60% of OPSCC and 25% of HNSCC are positive for high-risk human papillomavirus (HR-HPV), primarily HPV16. HPV positive and HPV negative OPSCC’s are molecularly and biologically distinct with differences in risk factors, age of presentation and clinical behavior. The precise molecular signatures of each have been well studied with respect to gene …

How Parental Divorce During Emerging Adulthood Gives Meaning To Women’S Experiences: A Phenomenological Approach, Kayla Reed

Theses and Dissertations--Family Sciences

This study examined how parental divorce impacts emerging adults’ familial relationships, romantic relationships, and development to build a basis for understanding emerging adult experiences. The participant sample consisted of 8 females between the ages of 19 and 24 (M = 21.6). A qualitative transcendental or psychological phenomenological research method was used. 90-minute interviews were conducted focusing on romantic relationships, family relationships, reactions and thoughts of parental divorce, and self-perception. NVIVO was used to allow a “bottom-up” design, emergent design, and interpretive inquiry for data analysis. Three themes emerged from the data: impacts of family dynamics, effects of developmental stage, and …

Histone Biotinylation In Candida Albicans, Sahar Hasim, Swetha Tati, Nandakumar Madayiputhiya, Renu Nandakumar, Kenneth W. Nickerson

Kenneth Nickerson Papers

Candida albicans is an opportunistic fungal pathogen in humans. It is a polymorphic fungus: it can live as yeasts, hyphae, or pseudohyphae. Biotin is required for cell growth and fatty acid metabolism because it is used as a cofactor for carboxylases such as acetyl-CoA carboxylase, and pyruvate carboxylase. In addition, we have discovered that biotin is used to modify histones in C. albicans. Biotinylation was detected by Western blots using a monoclonal antibiotin HRP-conjugated antibody as well as with qTOF and LC/MS/MS mass spectrometry. As a precaution, the antibiotin antibody was dialyzed against neutravidin prior to use. During this study, …

Using Biophysical Geospatial And Remotely Sensed Data To Classify Ecological Sites And States, Carson A. Stam

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Within the Intermountain West, vast expanses of big sagebrush shrubland and steppe are considered emblems of the western range. Currently, there are approximately 60 million hectares of big sagebrush within the 11 western states, four million of which are in the state of Utah. However, the historic distribution of sagebrush has been impacted by conversion to other types of land cover through juniper encroachment, urbanization, invasive weeds, and agricultural expansion. In Utah alone, big sagebrush communities have been reduced to approximately 55% of their historic extent. A primary and current example of the cumulative impact of big sagebrush loss is …

Population Dynamics And Movements Of Translocated And Resident Greater Sage-Grouse On Anthro Mountain, Utah, Natasha W. Gruber

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Greater sage-grouse (Centrocercus urophasianus) populations have declined range-wide. Species translocations have been identified as a conservation strategy to augment declining populations in restored habitats. I evaluated protocols previously used to successfully translocate greater sage-grouse in Utah by comparing annual production, survival, habitat use, integration and seasonal movements of translocated birds and their chicks to the resident population. To conduct this study, I translocated 60 greater sagegrouse hens captured and radio-collared on Parker Mountain to Anthro Mountain in the spring of 2009 and 2010. I also captured and radio-collared 19 resident hens to serve as my control group. All …

A Pilot Study: The Use Of A Survey To Assess The Food Knowledge Of Nutrition Students At Various Levels Of Nutrition Education, Chante Chambers

College of Education and Human Sciences: Dissertations, Theses, and Student Research

A working definition of a concept known as ‘food literacy’ encompasses using basic food preparation knowledge that has been learned, understood, and practiced to make better food decisions. To advance these skills for client service, a post-secondary nutrition program would need to include objectives that allow application of knowledge. For this reason, the purpose of this study was to determine the difference in knowledge and application among students in 100, 200 and 400 level college nutrition course(s). A survey was developed to measure the food knowledge of these college students as they prepare for careers as health care professionals. The …

The Effects Of Habitat Manipulations On Utah Prairie Dogs (Cynomys Parvidens) And Their Habitat On The Awapa Plateau Recovery Area In South-Central Utah, Gretchen Elizabeth Caudill

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Utah prairie dogs have been listed, in some capacity, under the Endangered Species Act since 1972. The lack of suitable habitat, particularly cool season grass cover,
has been identified as the primary factor impeding species recovery. Due to reproduction costs, Utah prairie dogs require a large quantity of cool season grasses. Lack of recovery has also been attributed to poor juvenile survival. Increased resources have been shown to increase weights, which would increase survival through the winter.

Beneficial habitat management techniques for Utah prairie dogs have yet to be determined for the Awapa Plateau recovery area. Utah prairie dogs require …

Quorum Sensing And Other Aspects Of The Biology Of Candida Albicans, Kenneth W. Nickerson

Kenneth Nickerson Papers

Most dimorphic fungi exhibit cell density dependent effects in that they grow as yeasts when inoculated at > 10⁶ cells per ml and as mycelia when inoculated at < 10⁶ cells per ml. For Candida albicans, we discovered (2001) that this phenomenon (quorum sensing) is due to the production and secretion of the C₁₅ isoprenoid trans-trans farnesol. Since then, we found that C. albicans cells treated with sublethal levels of zaragozic acid (2003) or fluconazole (2004) produced 10-40X more farnesol and that these fluconazole treated cells were ca. 5X more toxic to mice following tail vein injection. This suggestion …

A Life Of Water, Sherry Pogorzelski

Social Sciences

No abstract provided.

San Antonio High School Food Justice Program: A Handbook And Evaluation Of Edible Education, Katherine B. Tenneson

Pitzer Senior Theses

This senior environmental studies thesis explains and analyzes edible education through a food and gardening program at a continuation high school in Claremont, California. The first chapter situates the program-specific analysis by providing background information of the edible education movement, a history of the Edible Schoolyard in Berkeley, California, and an explanation of why food is a powerful teaching tool. The second chapter delineates the program by describing all of its components and compiling essential resources and teaching documents. The third chapter is based on interviews with 9 of 12 involved students and 7 teachers, and thoroughly explains the outcomes …

Effect Of Plant-Derived Molecules On Acinetobacter Baumannii Biofilm On Abiotic Surfaces, Ryan P. Pelletier

Honors Scholar Theses

The emergence of multiple drug resistant (MDR) Acinetobacter baumannii has lead to an increased interest in finding alternative antimicrobial compounds for controlling the pathogen. The present study investigated the effect of three plant-derived antimicrobials, namely eugenol (EUG), carvacrol (CAR), and thymol (THY), on A. baumannii biofilms. Using concentrations equal to or greater than the minimum bactericidal concentration (MBC) of each compound, the ability of EUG, CAR, and THY to inactivate the mature biofilms of three strains of MDR A. baumannii on polystyrene microtiter plates and stainless steel coupons was examined. All three plant-derived compounds significantly inactivated the bioflims of all …

Moss Mural, Chelsea Fredrikson

Senior Honors Projects

Moss Mural: Bridging the Arts and Sciences

Chelsea Fredrikson

Major: Fine Arts

Advisor: Robert Dilworth

Advisor Department: Fine Arts

Date 5-2012

Abstract

When we are young, in elementary school, we are encouraged to learn subjects together. Fine arts, science, math, and literature all work as one, and overlap to teach us valuable lessons and tools we can use as we grow. But as we become older school systems segregate subjects, forcing students to chose a direction. Do I have a creative mind, or a logical mind?

As an art student I’ve tried over the course of my college …

Modeling Freshwater Mussel Distribution In Relation To Biotic And Abiotic Habitat Variables In The Middle Fork John Day River, Oregon, Ericka E. Hegeman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Freshwater mussels are the most threatened taxonomic group in North America with extinction rates that exceed those of many species found in both terrestrial and freshwater ecosystems including fish, birds, and amphibians. Part of the reason that mussels are so threatened is because their larvae are parasitic on fish, making the completion of their life cycle dependent upon healthy fish populations. The imperilment of freshwater mussels is a cause for concern because of the benefits that mussels provide to freshwater ecosystems including habitat enhancement, substratum stabilization, nutrient cycling, and water clarification. Restoration and conservation efforts targeting western freshwater mussels have …

Drivers Of Nest Success And Stochastic Population Dynamics Of The Common Eider (Somateria Mollissima), David Thomas Iles

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Human-caused climate alterations to Arctic ecosystems have resulted in a constellation of impacts on the biological relationships within them, yet the consequences of these changes on the population dynamics of many species are poorly understood. Thus, an understanding of the drivers of variation in population performance is needed to inform the management and conservation of imperiled species. Here, we use a long-term dataset for the common eider, an Arctic-breeding sea duck, to examine the drivers of annual variation in nest survival, and evaluate the effects of variation in vital rates on population growth. Our chapter 2 results suggested that increased …

Avian Response To Post Wildland Fire Reseeding Treatments In Great Basin Shrubsteppe, Adam B. Brewerton

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Wildfire is often considered a destructive force. However, we have learned that fire is a natural part of many ecosystems and can even be productive by recycling nutrients, and allowing for regrowth. A natural pattern of fire frequency allows for native plants and animals to recover from its destructiveness and capitalize on its benefits. Environmental changes, such as exotic invasive species, like cheatgrass, and livestock grazing, can make recovery less likely. Cheatgrass also promotes fire. As cheatgrass establishes, fires become more frequent and larger, making it hard or impossible for native plants to recover. Land managers often reseed to restore …

Genetic Diversity And Genetic Structuring At Multiple Spatial Scales Across The Range Of The Northern Leopard Frog, Rana Pipiens, Ryan P. O'Donnell

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Genetic diversity is the raw material for evolution: evolution cannot happen without genetic diversity, and the ability of a population to respond to a changing environment depends directly on how diverse its genes are. Understanding the distribution of genetic diversity is important for many reasons, including predicting whether species will be able to adapt to climate change and predicting the spread of invasive species. Information about the distribution of genetic diversity across the range of the Northern Leopard Frog, a declining species, will not only help us to ensure that the species can continue to evolve in response to changing …

Identifying And Quantifying Sediment Sources And Sinks In The Root River, Southeastern Minnesota, Justin Collin Stout

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Fine sediment, normally understood to refer to sand, silts, and clays; is a natural constituent in all rivers. When in excess this fine sediment can degrade the habitat for aquatic life in these rivers, and carry with it many pollutants and nutrients which can cause adverse effects on wildlife and human populations.

Understanding how this fine sediment moves through a river system, from erosion off of hillslopes, transport through the river, and finally export from the mouth of the system is vital part to land and river management. However, predicting how fine sediment moves through a system is a difficult …

Mapping Fire Fuels Through Detection Of Canopy Biomass Loading In Juniper, Sagebrush, And Gambel Oak Communities, Sean Laroy Hammond

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Fire fuel inventory processes are customarily labor intensive endeavors. There is a growing need for an increase in accuracy of these inventories at a landscape level, due in large part to the ever increasing development of Wildland Urban Interface (WUI). More accurate inventory and mapping of wildland fuels will facilitate a more accurate simulation of wildfire behavior and analysis of fire behavior given a myriad of fuels treatments. This paper examines one approach to inventorying fire fuels at a landscape level and developing fuel model maps to be utilized in landscape level fire behavior simulations for use by land managers …

Livestock Foraging Behavior In Response To Sequence And Interactions Among Alkaloids, Tannins, And Saponins, Tiffanny L. Jensen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

During the past several decades, people worldwide have expressed a growing interest in reconstructing ecosystems to enhance ecological, economic, and social values. Yet, to do so we must find ways to enhance biodiversity, environmental quality and the sustainability of grazing lands. In all these instances, plants are the glue that binds soils, water, herbivores, and people. However, monocultures or simple grass-legume mixtures are not always ideal for intensively managed pastures due to their seasonality, susceptibility to pests, and monotony of plant nutrients and toxins. All plants contain so-called “toxins,” more appropriately referred to as secondary compounds, which are crucial in …