Marine Biology Commons^™

Margalefidinium Polykrikoides Cyst Resuspension In The Lafayette River, A Sub-Tributary Of The Chesapeake Bay, Gabrielle Greaney, Eduardo Perez Vega, Katherine Crider, Dreux Chappell, Kimberly Powell, Richard Hale, Peter Bernhardt, Margaret Mulholland

Undergraduate Research Symposium

Harmful Algal Blooms are a collection of algae in a body of water that can cause serious environmental issues and health problems in both people and aquatic organisms. Dinoflagellates are microscopic, unicellular, and eukaryotic organisms that are well known for forming harmful algal blooms because of eutrophication. Coastal Virginia suffers from HABs in the Chesapeake Bay and its tributaries. A common species of dinoflagellate, known as Margalefidinium polykrikoides exists in the Chesapeake Bay. The purpose of this study is to determine if sediment resuspension produced by wind generated surface gravity waves cause cysts (dinoflagellate resting stages) to be suspended into …

Using California Harmful Algae Risk Mapping To Predict Sea Lion Strandings, Florybeth La Valle, Sydney Socquet

Seaver College Research And Scholarly Achievement Symposium

Domoic acid (DA) is a toxin produced by marine diatoms of the genus Pseudo-nitzschia (Pn) and bioaccumulates in California sea lions (Zalophus californianus). DA toxicosis can cause neurological issues and death, and the rate at which Z. californianus become stranded due to this condition has been increasing since it was first diagnosed in a marine mammal in 1998. We compared geotemporal data of sea lion strandings with data from the California Harmful Algae Risk Mapping (C-HARM) Model to analyze patterns that may indicate when and where a sea lion stranding due to DA toxicosis will occur. C-HARM geographically visualizes the …

Health And Safety Effects Of Airborne Soil Dust In The Americas And Beyond, Daniel Q. Tong, Thomas E. Gill, William A. Sprigg, Robert Scott Van Pelt, Alexander Baklanov, Bridget Marie Barker, Jesse E. Bell, Juan Castillo, Santiago Gassó, Cassandra Gaston, Amit U. Raysoni

School of Earth, Environmental, & Marine Sciences Faculty Publications

Risks associated with dust hazards are often underappreciated, a gap between the knowledge pool and public awareness that can be costly for impacted communities. This study reviews the emission sources and chemical, physical, and biological characteristics of airborne soil particles (dust) and their effects on human and environmental health and safety in the Pan-American region. American dust originates from both local sources (western United States, northern Mexico, Peru, Bolivia, Chile, and Argentina) and long-range transport from Africa and Asia. Dust properties, as well as the trends and interactions with criteria air pollutants, are summarized. Human exposure to dust is associated …

Movement, Behavior, And Trophic Ecology Of A Pelagic Predator Guild In The Eastern Tropical Pacific Ocean, Ryan Keith Logan

All HCAS Student Capstones, Theses, and Dissertations

Pelagic apex predators exert strong influences on ecological communities, and often support valuable commercial or recreational fisheries worldwide. Yet, due to their rarity and pelagic lifestyle, many species, such as billfishes, have proven particularly difficult to study at resolutions necessary to define dynamics of recovery from fishery interaction, physical interaction with environmental features and prey exploitation, and competitive interactions among other billfish predators. This leads to a paucity of knowledge on billfish ecology and habitat use, and hinders management efforts. With the ever-improving and miniaturization of technology and oceanographic datasets, the ability to define and quantify these interactions of fish …

Epidermal Threads Reveal The Origin Of Hagfish Slime, Yu Zeng, David C. Plachetzki, Kristen Nieders, Hannah Campbell, Marissa Cartee, M. Sabrina Pankey, Kennedy Guillen, Douglas Fudge

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

When attacked, hagfishes produce a soft, fibrous defensive slime within a fraction of a second by ejecting mucus and threads into seawater. The rapid setup and remarkable expansion of the slime make it a highly effective and unique form of defense. How this biomaterial evolved is unknown, although circumstantial evidence points to the epidermis as the origin of the thread- and mucus-producing cells in the slime glands. Here, we describe large intracellular threads within a putatively homologous cell type from hagfish epidermis. These epidermal threads averaged ~2 mm in length and ~0.5 μm in diameter. The entire hagfish body is …

Age, Growth And Maturity Of The Yellow Stingray (Urobatis Jamaicensis), A Biannually Reproductive Tropical Batoid., Jessica Schieber, Daniel P. Fahy, John K. Carlson, David W. Kerstetter

Marine & Environmental Sciences Faculty Articles

Urobatis jamaicensis is a coastal batoid species affected by habitat loss and small-scale exploitation from fisheries and the aquarium trade, yet the life-history information available is limited. This is the first study to assess the vertebral centra from 195 stingrays to estimate age and growth patterns and compare them with the biannual reproductive pattern previously reported for this species. Age-at-size data were compared using five different growth models and found a two-parameter von Bertalanffy growth function (VBGF), the Gompertz model, and a modified VBGF fit best for males, females and sexes combined, respectively. Maturity was achieved before one year. However, …

Black Crowned Night Heron, Kevin Rafferty, Briana K. Zaffiro, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Ycnh 3d Skull, Kevin Rafferty, Briana K. Zaffiro, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Mafr 3d Skull, Kevin Rafferty, Briana K. Zaffiro, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

3D Scan of a Magnificent Frigatebird

Rosp 3d Skull (Roseate Spoonbill), Kevin Rafferty, Briana K. Zaffiro, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

3D skull of a roseate spoonbill

Isomerization Of Galactose To Tagatose: Recent Advances In Non-Enzymatic Isomerization, Jikai Zhao, Zhuo Wang, Qing Jin, Danyi Feng, Juhee Lee

School of Earth, Environmental, & Marine Sciences Faculty Publications

The valorization of galactose derived from acid whey to low-calorie tagatose has gained increasing attention. Enzymatic isomerization is of great interest but faces several challenges, such as poor thermal stability of enzymes and a long processing time. In this work, non-enzymatic (supercritical fluids, triethylamine, arginine, boronate affinity, hydrotalcite, Sn-β zeolite, and calcium hydroxide) pathways for galactose to tagatose isomerization were critically discussed. Unfortunately, most of these chemicals showed poor tagatose yields (70%). The latter is able to form a tagatose–calcium hydroxide–water complex, which stimulates the equilibrium toward tagatose and prevents sugar degradation. Nevertheless, the excessive use of calcium hydroxide may …

Initial Impacts Of The Covid-19 Pandemic On Australian Fisheries Production, Research Organisations And Assessment: Shocks, Responses And Implications For Decision Support And Resilience, Emily M. Ogier, David C. Smith, Sian Breen, Caleb Gardner, Daniel J. Gaughan, Harry K. Gorfine, Alistair J. Hobday, Natalie Moltschaniwskyj, Ryan Murphy, Thor Saunders, Michael Steer, James Woodhams

Fisheries Research Articles

Australia’s fisheries have experience in responding individually to specific shocks to stock levels (for example, marine heatwaves, floods) and markets (for example, global financial crisis, food safety access barriers). The COVID-19 pandemic was, however, novel in triggering a series of systemic shocks and disruptions to the activities and operating conditions for all Australia’s commercial fisheries sectors including those of the research agencies that provide the information needed for their sustainable management. While these disruptions have a single root cause—the public health impacts and containment responses to the COVID-19 pandemic—their transmission and effects have been varied. We examine both the impacts …

Grow-Out Culture Of Oyster Magallana Bilineata (Röding, 1798) Using Pouches: A Comparison Of Growth And Survival In The River And Earthen Pond, Ma. Junemie Hazel L. Lebata-Ramos, Ellen Flor D. Solis, Mark Jude C. Almeida

The Philippine Agricultural Scientist

Oysters are among the most in-demand aquaculture commodities in the Philippines and worldwide. With the decreasing culture area and the deteriorating water quality of oyster beds, there is a need to explore new culture sites and techniques to address the problems of dwindling stocks and the increasing demand for better quality oysters. This study compared the growth and survival of the oysters Magallana bilineata, the new accepted name of Crassostrea iredalei, cultured in an earthen pond and the river using pouches suspended from rafts. Mean growth rates of oysters in length and weight were significantly higher in those …

Capturing Of Organic Carbon And Nitrogen In Eelgrass Sediments Of Southern Scandinavia, Carmen Leiva-Dueñas, Anna Elizabeth Løvgren Graversen, Gary T. Banta, Marianne Holmer, Pere Masque, Peter Anton Upadhyay Stæhr, Dorte Krause-Jensen

Research outputs 2022 to 2026

The ability of seagrass meadows to filter nutrients and capture and store CO₂ and nutrients in the form of organic carbon (OC) and nitrogen (N) in their sediments may help to mitigate local eutrophication as well as climate change via meadow restoration and protection. This study assesses OC and N sediment stocks (top 50 cm) and sequestration rates within Danish eelgrass meadows. At four locations, eelgrass-vegetated and nearby unvegetated plots were studied in protected and exposed areas. The average OC and N sediment 50 cm stocks were 2.6 ± 0.3 kg OC m ^{− 2} and 0.23 ± 0.01 …

Recent Global Warming Induces The Coupling Of Dissimilar Long-Term Sedimentary Signatures In Two Adjacent Volcanic Lakes (Azores Archipelago, Portugal), David Vázquez-Loureiro, Alberto Sáez, Vítor Gonçalves, Teresa Buchaca, Armand Hernández, Pedro M. Raposeiro, Erik J. De Boer, Pere Masqué, Santiago Giralt, Roberto Bao

Research outputs 2022 to 2026

Paleoclimatological information derived from the study of lacustrine sedimentary records is not only biased by taphonomical processes but also by potential differences in the expression of climate variability in the sediments due to site-specific factors. Using a multiproxy approach (the elemental and isotopic compositions of organic matter, diatom assemblages, and marker pigments of algae and cyanobacteria), we study the different environmental signatures recorded since the Little Ice Age (LIA) in the sediments of two volcanic lakes located within the same caldera on São Miguel Island (Azores Archipelago). Lake Santiago is a crater lake whose eutrophic status in the last stage …

Building Artificial Reefs From Recycled Construction Materials: A Feasibility Study, Nicholas H. Lew

Construction Management

Naturally occurring reefs are some of the world’s most biologically diverse ecosystems formed by jagged rocks tucked slightly below sea level. In recent years global warming began to pose a major threat to many reef habitats. Most relevant is the increase in surface seawater temperatures that cause coral to bleach, taking away major food sources for larger marine species. Researchers have combated this by deploying artificial reefs in substitution for naturally formed limestone rock formations in order to promote the expansion of coastal habitats. This project specifically aims to utilize construction waste towards the production of artificial reefs, effectively upcycling …

Remote Sensing For Cost-Effective Blue Carbon Accounting, Martino E. Malerba, Micheli Duarte De Paula Costa, Daniel A. Friess, Lukas Schuster, Mary A. Young, David Lagomasino, Oscar Serrano, Sharyn M. Hickey, Paul H. York, Michael Rasheed, Jonathan S. Lefcheck, Ben Radford, Trisha B. Atwood, Daniel Lerodiaconou, Peter Macreadie

Research outputs 2022 to 2026

Blue carbon ecosystems (BCE) include mangrove forests, tidal marshes, and seagrass meadows, all of which are currently under threat, putting their contribution to mitigating climate change at risk. Although certain challenges and trade-offs exist, remote sensing offers a promising avenue for transparent, replicable, and cost-effective accounting of many BCE at unprecedented temporal and spatial scales. The United Nations Framework Convention on Climate Change (UNFCCC) has issued guidelines for developing blue carbon inventories to incorporate into Nationally Determined Contributions (NDCs). Yet, there is little guidance on remote sensing techniques for monitoring, reporting, and verifying blue carbon assets. This review constructs a …

Data From: Mechanisms Of Gill-Clogging By Hagfish Slime, Luke Taylor, Gaurav Chaudhary, Gaurav Jain, Andrew Lowe, Andre Hupe, Atsuko Negishi, Yu Zeng, Randy Ewoldt, Douglas Fudge

Biology, Chemistry, and Environmental Sciences Faculty Data Sets

Abstract of Proc. Roy. Soc. article:

Hagfishes defend themselves from gill-breathing predators by producing large volumes of fibrous slime when attacked. The slime’s effectiveness comes from its ability to clog predators’ gills, but the mechanisms by which hagfish slime clogs are uncertain, especially given its remarkably dilute concentration of solids. We quantified the clogging performance of hagfish slime over a range of concentrations, measured the contributions of its mucous and thread components, and measured the effect of turbulent mixing on clogging. To assess the porous structure of hagfish slime, we used a custom device to measure its Darcy permeability. We …

Increased Floodplain Inundation In The Amazon Since 1980, Ayan Fleischmann, Fabrice Papa, Stephen K. Hamilton, Alice Fassoni-Andrade, Sly Wongchuig, Jhan Carlo Espinoza, Rodrigo Paiva, John Melack, Etienne Fluet-Chouinard, Rafael M. Almeida

School of Earth, Environmental, & Marine Sciences Faculty Publications

Extensive floodplains throughout the Amazon basin support important ecosystem services and influence global water and carbon cycles. A recent change in the hydroclimatic regime of the region, with increased rainfall in the northern portions of the basin, has produced record-breaking high water levels on the Amazon River mainstem. Yet, the implications for the magnitude and duration of floodplain inundation across the basin remain unknown. Here we leverage state-of-the-art hydrological models, supported by in situ and remote sensing observations, to show that the maximum annual inundation extent along the central Amazon increased by 26% since 1980. We further reveal increased flood …

Marine Ecological Protection And Restoration: International Agendas And China Action, Ke Duan, Zhengyan Liu, Shengkang Liang, Yanbin Li, Dongliang Lu

Bulletin of Chinese Academy of Sciences (Chinese Version)

International conventions and initiatives can promote collective action against global crises, and strengthen the efforts of countries to take concerted actions. This study summarizes the important international agendas related to marine ecological conservation and restoration, and analyzes China's policy mechanism in recent years. It believes that the policies in China and international documents are synergistic and effective in jointly strengthening efforts to respond to the global crisis. This study also puts forward some countermeasures and suggestions for China to build a detailed regional marine ecological map, strengthen ecological corridor restoration, improve scientific and technological support systems, and promote international cooperation …

Saving The Critically-Endangered Western Gray Whale, Jen Maresh

Sustainability Research & Practice Seminar Presentations

Professor Jen Maresh, Biology - Saving the Western Gray Whale: How Science, Industry, and the Public are Coming Together to Protect a Critically Endangered Species from Oil & Gas Activities

On The Architecture Of Collaboration In Inter-Organizational Natural Resource Management Networks, Gordon M. Hickey, Evelyn Roozee, Remko Voogd, Jasper R. De Vries, Antonia Sohns, Dongkyu Kim, Owen Temby

School of Earth, Environmental, & Marine Sciences Faculty Publications

This paper reviews the architecture of collaboration that exists within inter-organizational natural resource management (NRM) networks. It presents an integrative conceptual framework designed to help operationalize the multi-level interactions that occur between different dimensions of trust, risk perception, and control as key concepts in inter-organizational collaboration. The objective is to identify and justify a series of propositions considered suitable for assessing inter-organizational NRM network collaboration through empirical work. Such an integrative conceptualization goes beyond the existing trust scholarship related to collaborative NRM, and, we argue, offers a useful starting point for further exploring some of the ‘inner’ social dynamics affecting …

Analysis Of “A Forest Under The Sea”- Studying Giant Kelp’S Benefits To Ecosystems, And Evaluating Kelp Restoration, Natalie V. Boyd

CAFE Symposium 2023

I wrote a research paper on how Giant Kelp needs to be restored due to the rising ocean temperatures. There are two methods that I specifically focused on and learned about which are "Super Kelp" and "Green Gravel." Giant Kelp is critical to our ecosystem and marine life specifically due to all the benefits that it supplies. For example, kelp forests can sequester up to 20 times more carbon than a land forest. Unfortunately, the kelp is dying off rapidly now because of climate change; specifically the rising temperatures and increased ocean acidification. In order to save the kelp, action …

Black Vulture Skull, Briana K. Zaffiro, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Skull from 8 cm total length [Coragyps atarus (Black Vulture)]

Metal Contents In House Geckos (Squamata: Gekkonidae) From Industrial And Urban Areas Of Southern Tamaulipas, Mexico And Western Andalucía, Spain, May Reflect Airborne Metal Pollution, Luisiana Morales-Zamudio, Alejandro Fierro-Cabo, Md. Saydur Rahman, Miguel Antonio Dominguez-Crespo

School of Earth, Environmental, & Marine Sciences Faculty Publications

House geckos share living quarters with humans in the tropical and subtropical regions inhabited by these reptiles. Gecko behavior, biological traits, continuous exposure to suspended particulate matter 0 µm in diameter (PM10) and dust, as well as status as exotic species, motivated the choice of these species to examine environmental exposure to ambient air pollutants, in particular metals, and subsequent accumulation in these organisms. One part of the study was conducted in Tamaulipas (Mexico) where Hemydactylus frenatus is abundant in urban and industrial environments, the other part was conducted in Andalucia (Spain) where Tarentola mauritanica is found in similar environments. …

Multiple Behaviors For Turning Performance Of Pacific Bluefin Tuna (Thunnus Orientalis), Abigail M. Downs, Allison Kolpas, Barbara A. Block, Frank E. Fish

Biology Faculty Publications

Tuna are known for exceptional swimming speeds, which are possible because of their thunniform lift-based propulsion, large muscle mass and rigid fusiform body. A rigid body should restrict maneuverability with regard to turn radius and turn rate. To test if turning maneuvers by the Pacific bluefin tuna (Thunnus orientalis) are constrained by rigidity, captive animals were videorecorded overhead as the animals routinely swam around a large circular tank or during feeding bouts. Turning performance was classified into three different types: (1) glide turns, where the tuna uses the caudal fin as a rudder; (2) powered turns, where the animal uses …

Impacts Of Tectonic Subsidence On Basin Depth And Delta Lobe Building, Tian Y. Dong, Jeffrey A. Nittrouer, Brandee Carlson, Brandon Mcelroy, Elena Il’Icheva, Maksim Pavlov, Hongbo Ma

School of Earth, Environmental, & Marine Sciences Faculty Publications

Channel avulsions on river deltas are the primary means to distribute sediment and build land at the coastline. Many studies have detailed how avulsions generate delta lobes, whereby multiple lobes amalgamate to form a fan-shaped deposit. These studies often assume steady subsidence and uniform basin depth. In nature, however, lobe building is disrupted by variable subsidence, and progradation of lobes into basins with variable depth: conditions that are prevalent for tectonically active areas. Herein, we explore sediment dispersal and deposition patterns across scales using measurements of delta and basin morphology compiled from field surveys and remote sensing, collected over 150 …

Global Dataset On Seagrass Meadow Structure, Biomass And Production, Simone Strydom, Roisin Mccallum, Anna Lafratta, Chanelle L. Webster, Caitlyn M. O'Dea, Nicole E. Said, Natasha Dunham, Karina Inostroza, Cristian Salinas, Samuel Billinghurst, Charlie M. Phelps, Connor Campbell, Connor Gorham, Rachele Bernasconi, Anna M. Frouws, Axel Werner, Federico Vitelli, Viena Puigcorbé, Alexandra D'Cruz, Kathryn M. Mcmahon, Jack Robinson, Megan J. Huggett, Sian Mcnamara, Glenn A. Hyndes, Oscar Serrano

Research outputs 2022 to 2026

Seagrass meadows provide valuable socio-ecological ecosystem services, including a key role in climate change mitigation and adaption. Understanding the natural history of seagrass meadows across environmental gradients is crucial to deciphering the role of seagrasses in the global ocean. In this data collation, spatial and temporal patterns in seagrass meadow structure, biomass and production data are presented as a function of biotic and abiotic habitat characteristics. The biological traits compiled include measures of meadow structure (e.g. percent cover and shoot density), biomass (e.g. above-ground biomass) and production (e.g. shoot production). Categorical factors include bioregion, geotype (coastal or estuarine), genera and …

What Drives Larval Condition For Northern Anchovy (Engraulis Mordax)? Implications For Coastal Pelagic Species Recruitment Fluctuations And Fishery Management Practices, Michelle Robidas

Theses

Discerning the causes of population boom and bust cycles for coastal pelagic species (CPS) has been a major focus of fisheries management research for over a century. Year-class strength is contingent on larval survival and condition, which can be influenced by larval size at age and growth rate. These two factors, in turn, can be affected by maternal investment and environmental variables such as water temperature, salinity, oxygen, and chlorophyll a. We evaluated each of these factors from 127 two to eight week-old Northern Anchovy (Engraulis mordax) larvae off the coast of San Diego to San Francisco, …

Evidence Of An Established Population Of Cherax Quadricarinatus (Von Martens, 1868) In South Texas, Usa, Adam Sanjar, Drew R. Davis, Richard J. Kline

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Cherax quadricarinatus (von Martens, 1868) is a large parastacid crayfish (Decapoda: Parastacidae) native to Australia and Papua New Guinea. Due to various factors, C. quadricarinatus is an emerging invasive species in an increasing number of regions across the world. Deleterious ecological effects of C. quadricarinatus introduction have been documented in many of these regions, and its spread has been monitored and restricted where possible. Previously, only a small, isolated population of C. quadricarinatus in southern California had been reported within the continental United States. Here, we report the collection of three adult C. quadricarinatus from Brownsville, Cameron County, Texas, the …