Marine Biology Commons^™

2007 Great Bay Water Quality (Datasonde) Monitoring Program, Jonathan Pennock

PREP Reports & Publications

In situ water quality assessment has become an important source of data for monitoring, research and management activities in estuaries nationwide. As part of the National Estuarine Research Reserve System, the Great Bay System-Wide Monitoring Program (SWMP) produces in situ water quality data for four sites in and around Great Bay. This project extends the SWMP program to include year-round in situ data for a station at the University of New Hampshire Coastal Marine Lab pier at the mouth of the Piscataqua River and summmer data for a station in the Salmon Falls (SF) River. This suite of stations provides …

2007 Great Bay Organic Nitrogen And Light Extinction Monitoring Program, Jonathan Pennock

PREP Reports & Publications

Nitrogen is most often considered to be the limiting nutrient for plant growth in marine waters. As a result, knowledge of nitrogen loading and ambient water-column concentrations are considered to be critical to understanding the response of aquatic ecosystems to nutrient over-enrichment—a process known as eutrophication when it results in the excess production of organic matter. Plant production in many estuarine systems may also be limited by light availability as a result of high levels of turbidity in the water resulting from sediments, dissolved organic matter, and phytoplankton in the water column. Light limitation resulting from human-induced increases in turbidity …

Mercury Transport And Bioaccumulation In The Alvarado Lagoon System, Veracruz State, Mexico, Edward O. Keith, Jane L. Guentzel

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Alvarado Lagoon System (ALS) consists of shallow rivers and lagoons connected to the Gulf of Mexico (GOMEX) by a narrow channel. We collected samples of water and seafood in the wet (September 2005) and dry (March 2003 and 2005) seasons, and human hair and sediment in 2005. Total Hg in sediments ranged from 27.5 to 90.5 μg Hg/g dry weight, while fish and shellfish Hg levels ranged from 0.01 to 0.35 μg Hg/g wet weight. Total Hg in human hair ranged from 0.10 to 3.36 μg Hg/g (n = 47) and 58 % of the hair samples were above …

Fisheries Research Report No. 170 - Biomass And Commercial Catch Estimates For Abalone Stocks In Areas Proposed As Sanctuary Zones For The Capes Marine Park, A. Hesp, Neil R. Loneragan, Norman G. Hall, H T. Kobryn, A.M. Hart, Frank Fabris, Jeremy Prince

Fisheries Research Reports

This study was undertaken to estimate the biomasses, biologically sustainable catches and current average annual commercial catches of three fished species of abalone, Haliotis roei (Roei), Haliotis laevigata (Greenlip) and Haliotis conicopora (Brownlip) in the proposed sanctuaries of the Capes Marine Park, south-western Australia. The current annual, catch estimates represent the catches that would be foregone by commercial fishers if the sanctuaries are implemented and will be used to evaluate the potential compensation to fishers (not part of this study). The biomass and catch estimates for each species in the proposed sanctuaries were estimated from a combination of scientific survey …

Fisheries Research Report No. 173 - Evaluation Of The Effectiveness Of Reducing Dolphin Catches With Pingers And Exclusion Grids In The Pilbara Trawl Fishery, Peter Stephenson, S. Wells

Fisheries Research Reports

Final FRDC Report – Project 2004/068

“Savewave” acoustic pingers were trialed on one vessel to determine if they would deter dolphins entering the trawl net. During daylight hours, the pingers were deployed on alternate shots in the configuration recommended by the manufacturer. On the other alternate shots, no pingers were deployed. A video camera in an underwater housing was attached to the headrope facing downstream for 18 trawl shots. On the 14 shots where usable video footage was obtained (11 with pingers deployed and 7 with pingers not deployed) the number of dolphins viewed in the camera frame was counted …

Who's Eating Whom? Identification And Quantification Of Deep-Pelagic Prey Fishes In The North Atlantic Ocean, A. Heger, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Understanding the structure and functioning of marine ecosystems requires accurate knowledge of trophic interactions. Trophic ecology studies generally underestimate prey diversity due to the difficulties imposed by digestion. Further, this degradation leads to uncertainty in the quantification of prey biomass (i.e., energy flow between various ecosystem components). Trophic interactions in the deep sea are poorly known relative to coastal ecosystems due to an incomplete inventory of meso-and bathypelagic species composition. The CoML field project MAR-ECO has increased our knowledge of the faunal structure of the mid-North Atlantic. Deep-pelagic fish specimens from the 2004 MARECO expedition provided a basis for an …

Bathypelagic Fish Diversity In The Sargasso Sea, Northwestern Atlantic Ocean, Tracey Sutton, Peter Wiebe, Ann Bucklin, Laurence P. Madin

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Of the various marine habitats, one of the (if not the) most daunting to quantify is the under-sampled bathypelagic zone (> 1000 m depth), which at 60% of the ocean’s volume is the largest habitat on Earth. One project addressing this challenge is the Census of

Marine Zooplankton (CMarZ), whose goal is the assessment of biodiversity of animal plankton throughout the world’s oceans. The 2006 CMarZ cruise in the Western North Atlantic provided an unprecedented opportunity to sample bathypelagic micronekton using a large midwater trawl (10-m2 MOCNESS) outfitted with fine (0.335-mm) mesh netting. This netting allowed non-destructive sampling of the …

The Importance Of Stealth: Recent Findings With The Eye-In-The-Sea Deep-Sea Observatory, Edith A. Widder, E. H. Raymond, Tracey Sutton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Eye-in-the-Sea (EITS) observatory was designed to be acoustically quiet and to use far-red illumination to observe deep-sea animals unobtrusively. The EITS has clearly demonstrated the critical importance of stealth in research ocean observatories. Its use has revealed both animals and behaviors never seen before. Additionally recordings of animal activity under different lighting conditions and in the presence or absence of different sound-producing vehicles (ROVs and submersibles) have revealed to what extent tools for exploration bias observations. Recent recordings made during a 2007 NOAA Ocean Exploration mission to deep waters around the Bahamas provide excellent additional examples of the importance …

(2008) Wellhead Protection Program - Lary Lane, Gilman, And Stadium Wells In The Town Of Exeter, Nh, Wellhead Protection Program

PREP Reports & Publications

A Wellhead Protection Program (WHPP) identifies existing and potential sources of contamination to public water supply wells. The purpose of a WHPP is to prevent contamination of groundwater used for drinking water, recognizing the best way to maintain high quality drinking water is to prevent contaminants from reach drinking water sources. The Federal Safe Drinking Water Act requires states to develop Wellhead Protection Programs. New Hampshire’s Groundwater Protection Act, NH RSA 485-C, provides the basis for protection in New Hampshire. The Town of Exeter, New Hampshire has developed this WHPP for three wells, the Lary Lane well, the Gilman well, …

Seasonal Variability Of The Observed Barrier Layer In The Arabian Sea, Pankajakshan Thadathil, Prasad Thoppil, R.R. Pao, P.M. Muraleedharan, Y.K. Somayajulu, V.V. Gopalakrishna, Raghu Murtugudde, G.V. Reddy, C. Revichandran

Faculty Publications

The formation mechanisms of the barrier layer ( BL) and its seasonal variability in the Arabian Sea ( AS) are studied using a comprehensive dataset of temperature and salinity profiles from Argo and other archives for the AS. Relatively thick BL of 20-60 m with large spatial extent is found in the central-southwestern AS ( CSWAS), the convergence zone of the monsoon wind, during the peak summer monsoon ( July-August) and in the southeastern AS ( SEAS) and northeastern AS ( NEAS) during the winter ( January-February). Although the BL in the SEAS has been reported before, the observed thick …

Testing Of Great Bay Oysters For Two Protozoan Pathogens, John I. Nelson

PREP Reports & Publications

Two protozoan pathogens, Haplosporidium nelsoni (MSX) and Perkinsus marinus (Dermo) are known to be present in Great Bay oysters. With funds provided by the New Hampshire Estuaries Project (NHEP), the Marine Fisheries Division of New Hampshire Fish and Game Department, (NHF&G) continues to assess the presence and intensity of both disease conditions in oysters from the major beds, some open for harvest, within the Great Bay estuarine system. Histological examination of Great Bay oysters has also revealed other endoparasites.

Comment On "How Accurate Are (234)Th Measurements In Seawater Based On The Mno(2)-Impregnated Cartridge Technique?'' By Pinghe Cai Et Al., Chin-Chang Hung, S. Bradley Moran, J. Kirk Cochran, Laodong Guo, Laodong Guo, Peter H. Santschi

Faculty Publications

No abstract provided.

A Seascape Approach To Predicting Reef Fish Distribution, Brian K. Walker

Oceanography Faculty Theses and Dissertations

Linking small-scale measurements of species distributions to broad-scale seascapes is necessary to understanding and predicting organismal distributions and their dynamics. This applies to reef fish populations as well. Reef fish studies are often limited to small spatial scales because of logistical and economic constraints; however, viewing the data at larger spatial scales might elucidate unforeseen relationships and patterns and facilitate regional management and conservation efforts. To address this growing need, an empirical model was created to predict reef fish abundance and species richness for the entire seascape using the relationship between the fish, benthic habitats, and GIS-derived topographic complexity metrics …

Effects Of Cyclic Hypoxia On Gene Expression And Reproduction In A Grass Shrimp, Palaemonetes Pugio, Nancy J. Brown-Peterson, C. Steve Manning, Vishal Patel, Nancy D. Denslow, Marius Brouwer

Faculty Publications

Cyclic changes in dissolved oxygen occur naturally in shallow estuarine systems, yet little is known about the adaptations and responses of estuarine organisms to cyclic hypoxia. Here we examine the responses of Palaemonetes pugio, a species of grass shrimp, to cyclic hypoxia (1.5-8 mg/l dissolved oxygen; 4.20-22.42 kPa) at both the molecular and organismal levels. We measured alterations in gene expression in hepatopancreas tissue of female grass shrimp using custom cDNA macroarrays. After short-term (3-d) exposure to cyclic hypoxia, mitochondrial manganese superoxide dismutase (MnSOD) was upregulated and 70-kd heat shock proteins (HSP70) were downregulated. After 7-d exposure, nuclear genes encoding …

Shellfish Tissue Monitoring In New Hampshire Estuaries 2006, Phil Trowbridge

PREP Reports & Publications

Conducted by a committee of Canadian and US government and university scientists, Gulfwatch examines the effects of decades of development and industrialization on the water quality of the Gulf as it relates to human health as well as its impact on other marine organisms. Gulfwatch scientists collect blue mussels at over 60 US and Canadian sites Gulf-wide, and analyze the organisms’ tissue for potentially harmful levels and concentrations of toxins including heavy metals, chlorinated pesticides, polychlorinated biphenyls (PCBs), and polycyclic aromatic hydrocarbons (PAHs).

New Hampshire increased the number of Gulfwatch sampling locations from two sites per year in 1997 to …

Real-Time Coral Stress Observations Before, During, And After Beach Nourishment Dredging Offshore Se Florida, L. Fisher, Kenneth Banks, David S. Gilliam, Richard E. Dodge, D. Stout, Bernardo Vargas-Ángel, Brian K. Walker

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Beach nourishment in Southeast Florida involves dredging sand source borrow areas located between offshore reefs. From May 2005 to February 2006 Broward County, FL. nourished 10.9 km of beach with 1.5 ×106 m3 of sand. As part of a program to monitor potential reef community impacts, a visual stress index was developed from laboratory experiments and histological analyses for three stony coral species (Montastrea cavernosa, Solenastrea bournoni, and Siderastrea siderea). Scoring involved healthy = 0; moderately stressed = 1 (polyp swelling, increased mucus); markedly stressed = 2 (coloration changes, increased mucus secretion, tissue thinning); and severely stressed = 3 (severe …

Guide To Understand Brentwood's Land Use Regulations, Brentwood Conservation Commission

PREP Reports & Publications

No abstract provided.

Fisheries Research Report No.172 - Identifying Obstacles To Profitably Growing Out Western Rock Lobsters, Roy Melville-Smith, Danielle Johnston, B. Johnston, N. J. Thomson

Fisheries Research Reports

A Report Prepared for the Aquaculture Development Council.

The cost of growing out western rock lobsters from pueruli to marketable-sized lobsters has been modeled from available information. The model uses different scenarios of survival rates, marketing weights, market prices, feed costs, puerulus prices, labour costs, puerulus compensation costs, discount rates and capital costs. The sensitivity of estimated profitability to various input costs and rock lobster prices was assessed by estimating the impact of changes on the estimates of net present value (NPV) internal rate of return (IRR) and benefit:cost ratio. Importantly, the aim of the study was to identify key …

Summary Report For Round 1 Of The Community Technical Assistance Program, Jennifer Hunter

PREP Reports & Publications

The New Hampshire Estuaries Project (NHEP) initiated its Community Technical Assistance Program (CTAP) in 2005. The program provides consulting assistance to the 42 New Hampshire communities that are part of the watershed areas for the Great Bay estuary, Hampton Seabrook Harbor estuary, and Atlantic coast. Assistance is available in the areas of land conservation planning, wetlands/stream buffer protection, and stormwater management. Eleven communities applied for and received assistance through the first round of the program.

Characterization Of Unusual Gymnamoebae Isolated From The Marine Environment, Margaret Wacera Mbugua

Theses, Dissertations and Capstones

Amoebae are important heterotrophic protists (protozoa) and this study focuses on three unusual forms from the marine environment. Amoebae are ubiquitous and play an important role as consumers in microbial communities. A common coastal ctenophore (Mnemiopsis sp.) is known to harbor an undescribed naked amoeba on the comb plate surface. The nature of the symbiotic association is unknown although electron microscopy suggests these micrograzers are degrading comb plates (Moss et al., 2001). A second amoeba isolate from mangrove waters is new to science by virtue of its distinctive trophic form that does not conform to any described species. …

Patterns In Southeast Florida Coral Reef Community Composition, M. P. Sathe, David S. Gilliam, Richard E. Dodge, L. E. Fisher

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Southeast (SE) Florida coral reef system is the northern extension of the Florida reef tract. This high latitude system lies offshore a heavily populated and urbanized coast and therefore is affected by numerous environmental and anthropogenic stressors. Using annual monitoring data collected in 2004, the southeast lorida reef community was analyzed to investigate patterns in community composition in various habitat types. Data was collected by SCUBA divers who conducted a 30m2 belt transect survey at 24 sample sites offshore Broward County (SE), Florida. Sites ranged in depth range from six to 18 meters. The 24 sites occurred on five …

Long-Term Monitoring Of A High-Latitude Coral Reef System Off Southeast Florida, Usa: A Partnership Between Academia And Resource Management, David S. Gilliam, Kenneth Banks, Michael Callahan, Chantal Collier, Richard E. Dodge, Louis E. Fisher, Jennifer Wheaton

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Significant coral reef community development exists along the eastern shelf of the United States from the Dry Tortugas through the Florida Keys (Monroe County) and Southeast (SE) Florida (Miami-Dade, Broward, Palm Beach, and Martin Counties). State and county resource managers have partnered with academia to monitor the health of the SE Florida reef system. Since 2000, more than 20 sites have been monitored annually offshore Broward County. Quantitative data includes stony coral species cover, colony size, density, and condition (bleaching, disease, etc.) and gorgonian and sponge density. The SE Florida Coral Reef Evaluation and Monitoring Project (SECREMP) was established in …

A-State Offering Students Courses On Marine Mammals, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

Arkansas State University Students Prepare Manatee Exhibit, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

Nobody’S Dolphins, Aldemaro Romero Jr.

Publications and Research

No abstract provided.

Winter 2008, Nsu Oceanographic Center

Currents

No abstract provided.

Additional Records Of Deep-Sea Fishes From Off Greater New England, Karsten E. Hartel, Christopher P. Kenaley, John K. Galbraith, Tracey Sutton

Marine & Environmental Sciences Faculty Articles

Recent review of deep-sea fishes captured deeper than 200m off greater New England, from the Scotian Shelf at 44°N to the southern New England Shelf at about 38°N, documented 591 species. Subsequent trawling activity and reviews of deep-sea taxa occurring in the area have revealed that an additional 40 species in habit the deep sea off New England. Thirty-two of these new records were captured in the course of 44 bottom trawls and 94 mid-water trawls over or in the proximity of Bear Seamount (39°55'N, 67°30'W). Five of the 40 species have been described as new to science, at least …

Diverse Bacterial Pks Sequences Derived From Okadaic Acid-Producing Dinoflagellates, Roberto Perez, Li Liu, Jose V. Lopez, Tianying An, Kathleen S. Rein

Marine & Environmental Sciences Faculty Articles

Okadaic acid (OA) and the related dinophysistoxins are isolated from dinoflagellates of the genus Prorocentrum and Dinophysis. Bacteria of the Roseobacter group have been associated with okadaic acid producing dinoflagellates and have been previously implicated in OA production. Analysis of 16S rRNA libraries reveals that Roseobacter are the most abundant bacteria associated with OA producing dinoflagellates of the genus Prorocentrum and are not found in association with non-toxic dinoflagellates. While some polyketide synthase (PKS) genes form a highly supported Prorocentrum clade, most appear to be bacterial, but unrelated to Roseobacter or Alpha-Proteobacterial PKSs or those derived from other Alveolates …

The State Of Coral Reef Ecosystems Of Southeast Florida, Chantal Collier, Rob Ruzicka, Ken Banks, Luiz Barbieri, Jeff Beal, David Bingham, James Bohnsack, Sandra Brooke, Nancy Craig, Richard E. Dodge, Lou Fisher, Nick Gadbois, David S. Gilliam, Lisa Gregg, Todd Kellison, Vladimir Kosmynin, Brian Lapointe, Erin Mcdevitt, Janet Phipps, Nikki Poulos, John Proni, Patrick Quinn, Bernhard Riegl, Richard E. Spieler, Joanna Walczak, Brian K. Walker, Denise Warrick

Marine & Environmental Sciences Faculty Reports

The northern extension of the Florida reef tract and a complex of limestone ridges run parallel to the subtropical Atlantic coastline of southeast Florida. Spanning 170 km from the northern border of Biscayne National Park (BNP) in Miami-Dade County to the St. Lucie Inlet in Martin County, the reefs and hardbottom areas in this region support a rich and diverse biological community (Figure 5.1). Nearshore reef habitats in southeast Florida include hardbottom areas, patch reefs and worm reefs (Phragmatopoma spp.) exhibiting abundant octocoral, macroalgae, stony coral and sponge assemblages. Offshore, coral reef associated biotic assemblages occur on linear Holocene Acropora …

The Colonial Zoanthid Palythoa Caribaeorum: Population Dynamics On Southeast Florida Reefs, Joanna C. Walczak

HCNSO Student Theses and Dissertations

The colonial zoanthid Palythoa caribaeorum (Cnidaria, Zoanthidea) (Duchassaing and Michelotti 1861) is a major benthic component of most Caribbean reefs and is an extremely aggressive spatial competitor (Suchanek and Green 1981). This study looks at annual visits to 16 permanent monitoring sites over 3 reef designations (Inshore Ridge Complex, Middle Reef, and Outer Reef) in Broward County, Florida from 2002-2006. The data obtained in this study fills an informational void regarding the role of zoanthids in the southeast Florida reef benthic community. The study was conducted in two parts. Part One used digital imagery analysis to quantify the spatial cover …