Marine Biology Commons^™

Severe 2010 Cold-Water Event Caused Unprecedented Mortality To Corals Of The Florida Reef Tract And Reversed Previous Survivorship Patterns, Diego Lirman, Stephanie Schopmeyer, Derek Manzello, Lewis J. Gramer, William F. Precht, Frank E. Muller-Karger, Kenneth Banks, Brian Barnes, Erich Bartels, Amanda Bourque, James Byrne, Scott Donahue, Janice Duquesnel, Louis Fisher, David S. Gilliam, James C. Hendee, Meaghan E. Johnson, Kerry Maxwell, Erin Mcdevitt, Jamie Monty, Digna Rueda, Rob Ruzicka, Sara Thanner

Marine & Environmental Sciences Faculty Articles

Background

Coral reefs are facing increasing pressure from natural and anthropogenic stressors that have already caused significant worldwide declines. In January 2010, coral reefs of Florida, United States, were impacted by an extreme cold-water anomaly that exposed corals to temperatures well below their reported thresholds (16°C), causing rapid coral mortality unprecedented in spatial extent and severity.

Methodology/Principal Findings

Reef surveys were conducted from Martin County to the Lower Florida Keys within weeks of the anomaly. The impacts recorded were catastrophic and exceeded those of any previous disturbances in the region. Coral mortality patterns were directly correlated to in-situ and satellite-derived …

Oyster Reefs As Natural Breakwaters Mitigate Shoreline Loss And Facilitate Fisheries, Steven B. Scyphers, Sean P. Powers, Kenneth L. Heck Jr., Dorothy Byron

University Faculty and Staff Publications

Shorelines at the interface of marine, estuarine and terrestrial biomes are among the most degraded and threatened habitats in the coastal zone because of their sensitivity to sea level rise, storms and increased human utilization. Previous efforts to protect shorelines have largely involved constructing bulkheads and seawalls which can detrimentally affect nearshore habitats. Recently, efforts have shifted towards “living shoreline” approaches that include biogenic breakwater reefs. Our study experimentally tested the efficacy of breakwater reefs constructed of oyster shell for protecting eroding coastal shorelines and their effect on nearshore fish and shellfish communities. Along two different stretches of eroding shoreline, …

Boynton-Delray Coastal Water Quality Monitoring Program, Thomas P. Carsey, Charles M. Featherstone, Kelly D. Goodwin, Christopher D. Sinigalliano, S. Jack Stamates, Jia-Zhong Zhang, John Proni, Joseph R. Bishop, Cheryl J. Brown, Madeleine M. Adler, Patricia Blackwelder, Husain Alsayegh

Marine & Environmental Sciences Faculty Reports

This report discusses a sequence of six cruises in the vicinity of the Boynton-Delray (South Central) treated-wastewater plant outfall plume (26°27'43"N, 80°2'32"W), the Boynton Inlet (26°32'43"N, 80°2'30"W), and the Lake Worth Lagoon, Palm Beach County, Florida. The sampling cruises took place on June 5-6, 2007; August 28-29, 2007; October 18-19, 2007; February 14 and 18, 2008; May 19-20, 2008; and July 11-13, 2008. Water was sampled at 18 locations at the surface, middle, and near the seafloor (where there was sufficient depth) for a total of 45 samples; these samples were analyzed for a variety of nutrients and related parameters. …

Fisheries Occasional Publication No.99 - Review Of The Western Australian Rock Lobster Stock Assessment, Andre E. Punt, Department Of Fisheries Western Australia

Fisheries Occasional Publications

In 2000, the West Australian Rock Lobster (WRL) fishery became the first fishery in the world to be certified by the Marine Stewardship Council (MSC). At the annual audit in December 2010, the MSC’s independent certifying body, Scientific Certification Systems, set a number of conditions for ongoing certification. The most important condition under Principle 1, Stock Assessment, was to have an international stock assessment and modelling expert undertake a review of the latest version of the WRL Stock Assessment Report that has been used to provide advice for the management of the fishery, and 2010 stock assessment and 2010/11 management …

Application Of A Gene-Based Population Dynamics Model To The Optimal Egg Size Problem: Why Do Bivalve Planktotrophic Eggs Vary In Size?, Eric N. Powell, Jason Morson, John M. Klinck

CCPO Publications

The presumption is that egg quality influences larval survival and that egg size influences egg quality. Thus, larger eggs should be favored by selection. Counterweighing the tendency for egg size to increase is the number of eggs that can be produced if egg size remains small. We examine how egg size and egg number counterbalance in Crassostrea oysters, resulting in an average egg size near 50 mu m. Simulations imposing a diversity of ranges in larval survivorship-from little advantage for large eggs relative to small eggs to a great advantage-yield some anticipated outcomes in which genotypes generating larger eggs are …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

The Role Of Crassostrea Virginica Hemocytes In Shell Formation: Ex Vivo Mineral Deposition By Cultured Hemocytes, Emily A. Untener, Douglas C. Hansen, Karolyn Hansen

Biology Faculty Publications

Abstract of Technical Paper Presented at the 103rd Annual Meeting National Shellfisheries Association Baltimore, Maryland March 27–31, 2011

Dissolved And Colloidal Element Transport Through The Coastal Transition Zone, Moo Joon Shim

Dissertations

There are several factors (e.g., hurricanes, floodplain, and anthropogenic sources) that could modify trace element behavior through the coastal transition zone (CTZ). However, there is still a lack of information about these variables in affecting trace elements in the CTZ. For this study, water samples were collected in the Pearl River (PR), Bay of St. Louis (BSL), and the Mississippi River plume to study the effects of these factors on trace element.

A possible effect of Hurricane Katrina on water quality was examined in the East Pearl River (EPR). Hurricane Katrina could have resulted in increased inputs of organic matter …

Temporal And Spatial Variability Of Phytoplankton Biomass In Coastal Mississippi Waters, Lorin Matthew Dornback

Master's Theses

Chlorophyll concentrations were measured in western Mississippi coastal waters to determine the spatial and temporal variability of phytoplankton. Nutrients (nitrate, silicate, phosphate), river discharge, temperature, salinity, stratification, tides, currents and winds were measured in concert with the phytoplankton concentrations. The purpose of this study was to determine the seasonal variability in phytoplankton and what was driving the variability. This study was comprised of a three year (September 2007-November 2010) time series where samples were taken once a month for eight stations. Profiles of each station were taken using a Conductivity, Temperature and Depth (CTD) sensor and a WET Labs FL-3 …

Feeding Selectivity And Habitat Usage Of Esox Americanus, Scott Richard Clark

Master's Theses

Patterns of piscine prey selection and habitat usage of Esox americanus were assessed through a series of field and experimental studies. Although few detailed studies exist on the foraging behavior and habitat usage of E. americanus, throughout its range it may be an important trophic component in maintaining fish assemblage structure in many lower order streams. Across 17 sampled streams, the presence of E. americanus among reaches within streams was found to be strongly correlated with increasing levels of habitat complexity. Reaches occupied by E. americanus featured increased amounts of in-stream physical structure, increased variability in stream width and …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

A Molecular Assessment Of Speciation And Evolutionary History Of The Globally Distributed Spotted Eagle Ray (Aetobatus Narinari), Vincent P. Richards, Marcy Henning, Wayne Witzell, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The spotted eagle ray (Aetobatus narinari), a species of conservation concern (Near Threatened IUCN category) is commonly associated with coral reef ecosystems worldwide where it is likely to play an important predatory role. Currently described as a single, circumglobally distributed species, geographic differences in parasite diversity have led to suggestions that A. narinari may constitute a species complex. There has been no systematic evidence to support this suggestion, however. If multiple species of spotted eagle ray exist, each will likely posses decreased geographic ranges and population sizes, altering the impacts of threats and requiring separate assessments of conservation …

Bridging The Marine–Terrestrial Disconnect To Improve Marine Coastal Zone Science And Management, Benjamin I. Ruttenberg, Elise F. Granek

Environmental Science and Management Faculty Publications and Presentations

Coastal zone ecosystems sit between larger terrestrial and marine environments and, therefore, are strongly affected by processes occurring in both systems. Marine coastal zone systems provide a range of benefits to humans, and yet many have been significantly degraded as a result of direct and indirect human impacts. Management efforts have been hampered by disconnects both between management and scientific research and across linked marine–terrestrial systems. Management jurisdictions often start or end at the shoreline, and multiple agencies at different levels of government often have overlapping or conflicting management goals or priorities, or suffer from a lack of knowledge or …

Phylogeography Of The Reef Fish Cephalopholis Argus(Epinephelidae) Indicates Pleistocene Isolation Across The Indo-Pacific Barrier With Contemporary Overlap In The Coral Triangle, Michelle R. Gaither, Brian W. Bowen, Tiana-Rae Bordenave, Luiz A. Rocha, Stephen J. Newman, Juan A. Gomez, Lynne Van Herwerden, Matthew T. Craig

Fisheries Research Articles

Background

The Coral Triangle (CT), bounded by the Philippines, the Malay Peninsula, and New Guinea, is the epicenter of marine biodiversity. Hypotheses that explain the source of this rich biodiversity include 1) the center of origin, 2) the center of accumulation, and 3) the region of overlap. Here we contribute to the debate with a phylogeographic survey of a widely distributed reef fish, the Peacock Grouper (Cephalopholis argus; Epinephelidae) at 21 locations (N = 550) using DNA sequence data from mtDNA cytochrome b and two nuclear introns (gonadotropin-releasing hormone and S7 ribosomal protein).

Results

Population structure was significant …

Invertebrate Zooid Polymorphism: Hydractinia Polyclina And Pagurus Longicarpus Interactions Mediated Through Spiralzooids, Charlotte M. Regula-Whitefield

All Theses And Dissertations

Evaluating the net interaction between symbionts can be challenging when one participant is a colonial animal with polymorphic zooids, because each zooid type has unique functions. The colonial hydroid Hydractinia polyclina has three distinct zooid types, each of which contributes particular components to the interaction with host hermit crabs. Of these three zooid types, the function of spiralzooids is not well understood. Previously, spiralzooids have been proposed to contribute a strong negative interaction component by directly reducing their host hermit crab’s reproductive output. However, this hypothesis is not supported by past or current data. I propose that spiralzooids instead function …

Rna Interference In Marine And Freshwater Sponges: Actin Knockdown In Tethya Wilhelma And Ephydatia Muelleri By Ingested Dsrna Expressing Bacteria, Ajna S. Rivera, April L. Hill, Et. Al.

Biology Faculty Publications

Background: The marine sponge Tethya wilhelma and the freshwater sponge Ephydatia muelleri are emerging model organisms to study evolution, gene regulation, development, and physiology in non-bilaterian animal systems. Thus far, functional methods (i.e., loss or gain of function) for these organisms have not been available.

Results: We show that soaking developing freshwater sponges in double-stranded RNA and/or feeding marine and freshwater sponges bacteria expressing double-stranded RNA can lead to RNA interference and reduction of targeted transcript levels. These methods, first utilized in C. elegans, have been adapted for the development and feeding style of easily cultured marine and freshwater poriferans. …

Study Of The Far Wake Of A Large Ship, M. Gilman, Alexander Soloviev, H. Graber

Marine & Environmental Sciences Faculty Articles

A large dataset of high-resolution photographic images of far wakes of a volunteer observing ship (Royal Caribbean’s Explorer of the Seas) has been acquired under various meteorological conditions and ship operation modes. This work presents the description of instrumentation, methodology, and the results of the experiment. Environmental and ship operation factors that affect appearance and geometric properties of ship wakes in photographic and satellite-based radar images have been analyzed. The photo imagery reveals an asymmetry of the wake depending on wind direction relative to the ship course. In addition, a good agreement between the averaged shape of the wakes …

Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2010, New Hampshire Department Of Environmental Services, Matthew A. Wood, Philip Trowbridge

PREP Reports & Publications

Nitrogen, phosphorus, and sediment loads to the Great Bay Estuary are a growing concern. The Piscataqua Region Estuaries Partnership ( PREP) calculates the nitrogen load from tributaries to the Great Bay Estuary for its State of the Estuaries reports. Therefore, the purpose of this study was to collect representative data on nitrogen, phosphorus, and suspended sediment concentrations in tributaries to the Great Bay Estuary in 2010. The study design followed the tributary sampling design which was implemented by the New Hampshire Department of Environmental Services between 2001 and 2007 and by the University of New Hampshire in 2008 and 2009, …

Nudibranch Predators Of Octocorallia, Eric Brown

HCNSO Student Capstones

Nudibranchs are soft-bodied marine heterobranch gastropod molluscs which lack a shell and mantle cavity. The basic body plan is bilaterally symmetrical with an expanded notum, but in regards to other physical characteristics they exhibit a wide range of forms. Compared to other molluscs, evolutionarily the head and body became flattened and streamlined and tentacles have been lost or shifted to different areas of the body. Nudibranchs are found in many variations of size and color; despite the fact that these animals in general are noted for flamboyant colors and prominent external anatomical structures, many species rely upon a more cryptic …

Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2010, New Hampshire Department Of Environmental Services, Matthew A. Wood, Philip Trowbridge

PREP Reports & Publications

Nitrogen, phosphorus, and sediment loads to the Great Bay Estuary are a growing concern. The Piscataqua Region Estuaries Partnership (PREP) calculates the nitrogen load from tributaries to the Great Bay Estuary for its State of the Estuaries reports. Therefore, the purpose of this study was to collect representative data on nitrogen, phosphorus, and suspended sediment concentrations in tributaries to the Great Bay Estuary in 2010. The study design followed the tributary sampling design which was implemented by the New Hampshire Department of Environmental Services between 2001 and 2007 and by the University of New Hampshire in 2008 and 2009, so …

A New Species Of Leucothoid Amphipod, Anamixis Bananarama, Sp. N., From Shallow Coral Reefs In French Polynesia (Crustacea, Amphipoda, Leucothoidae), James Darwin Thomas, Traudl Krapp-Shickel

Marine & Environmental Sciences Faculty Articles

Both leucomorph and anamorph developmental stages of Anamixis bananarama sp. n., are illustrated and described from shallow back reef environments of Moorea, French Polynesia. Distinguished by vestigial fi rst gnathopods that persist in post-transformational adult males, this is the second species in the genus to exhibit this unusual character. In other features such as coxae and second gnathopods A. bananarama sp. n. resembles other Pacific Plate endemics of Anamixis known from the region. Specific host association is not documented but suspected to be small calcareous asconoid sponges associated with coral rubble.

Super-Aggregations Of Krill And Humpback Whales In Wilhelmina Bay, Antarctic Peninsula, Douglas P. Nowacek, Ari S. Friedlaender, Patrick N. Halpin, Elliott L. Hazen, David W. Johnston, Andrew J. Read, Boris Espinasse, Meng Zhou, Yiwu Zhu

Environmental, Earth, and Ocean Sciences Faculty Publication Series

Ecological relationships of krill and whales have not been explored in the Western Antarctic Peninsula (WAP), and have only rarely been studied elsewhere in the Southern Ocean. In the austral autumn we observed an extremely high density (5.1 whales per km²) of humpback whales (Megaptera novaeangliae) feeding on a super-aggregation of Antarctic krill (Euphausia superba) in Wilhelmina Bay. The krill biomass was approximately 2 million tons, distributed over an area of 100 km² at densities of up to 2000 individuals m⁻³; reports of such ‘super-aggregations’ of krill have been absent in …

Simultaneously Hermaphroditic Shrimp Use Lipophilic Cuticular Hydrocarbons As Contact Sex Pheromones, Dong Zhang, John A. Terschak, Maggy A. Harley, Junda Lin, Jörg D. Hardege

Ocean Engineering and Marine Sciences Faculty Publications

Successful mating is essentially a consequence of making the right choices at the correct time. Animals use specific strategies to gain information about a potential mate, which is then applied to decision-making processes. Amongst the many informative signals, odor cues such as sex pheromones play important ecological roles in coordinating mating behavior, enabling mate and kin recognition, qualifying mate choice, and preventing gene exchange among individuals from different populations and species. Despite overwhelming behavioral evidence, the chemical identity of most cues used in aquatic organisms remains unknown and their impact and omnipresence have not been fully recognized. In many crustaceans, …

The Effect Of Air Temperature On The Incubation Period And Hatching Success Of In Situ Loggerhead Sea Turtle (Caretta Caretta) Clutches In Broward County, Florida, Lucy Teal Kawana, Curtis M. Burney, Louis Fisher

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The survival rates of pre-emergent sea turtle hatchlings are critically dependent upon temperature. This study aims to determine if changes in air temperature have influenced the incubation time and/or the survivorship of the pre-emergent loggerhead sea turtle (Caretta caretta) hatchlings for past sea turtle nesting seasons in Broward County. Air temperature data within the hatching seasons of 1999 to 2009 was obtained from the NOAA National Climatic Data Center’s Fort Lauderdale beach station. The loggerhead sea turtle hatching data collected by the Broward County Sea Turtle Conservation Program from the same time period was examined to assess the …

Review Of Panulirus Argus Virus 1-- A Decade After Its Discovery, Donald C. Behringer Jr., Mark J. Butler Iv, Jeffrey D. Shields, Jessica Moss

Biological Sciences Faculty Publications

In 2000, a pathogenic virus was discovered in juvenile Caribbean spiny lobsters Panulirus argus from the Florida Keys, USA. Panulirus argus virus 1 (PaV1) is the first naturally occurring pathogenic virus reported from lobsters, and it profoundly affects their ecology and physiology. PaV1 is widespread in the Caribbean with infections reported in Florida (USA), St. Croix, St. Kitts, Yucatan (Mexico), Belize, and Cuba. It is most prevalent and nearly always lethal in the smallest juvenile lobsters, but this declines with increasing lobster size; adults harbor the virus, but do not present the characteristic signs of the disease. No other PaV1 …

Are Western Australian Waters The Least Productive Waters For Finfish Across Two Oceans? A Review With A Focus On Finfish Resources In The Kimberley Region And North Coast Bioregion, B. W. Molony, S. J. Newman, L. Loll, R C J Lenanton, B. Wise

Fisheries Research Articles

The marine ecosystems of Western Australia, including those in the Kimberley, are classified as being of moderate to low productivity. This is primarily a consequence of the influence of the Leeuwin Current, the eastern boundary current that flows poleward delivering warm, low nutrient waters, and only sporadic short-term upwelling events to shelf habitats off the Western Australian coast. This, coupled with little riverine inflow from old weathered terrestrial systems, results in low levels of primary and secondary production in habitats along most of the coast. The consequence is that finfish fisheries in the Kimberley and throughout the State typically land …

Activation Of Amp-Activated Protein Kinase As An Early Indicator For Stress In The Lobster, Homarus Americanus, Stephanie Podolski

All Theses And Dissertations

Variations in water temperature, salinity, pH, and oxygen concentration are stressors that marine invertebrates face on a daily basis. Each of these physiological stressors creates a large cellular demand for energy. In mammals, energy metabolism is regulated by the enzyme AMP-activated protein kinase (AMPK), which is highly conserved during evolution. This project was designed to test the hypothesis that AMPK is present and activated by temperature, hypoxia, and anoxia stress in the lobster, Homarus americanus.

Animals were exposed to a rapid and progressive increase in temperature (6ºC per hour) beginning at 14 ºC. We measured lactate concentrations and AMPK …

Population Dynamics Of Sheepshead (Archosargus Probatocephalus; Walbaum 1792) In The Chesapeake Bay Region: A Comparison To Other Areas And An Assessment Of Their Current Status, Joseph Charles Ballenger

OES Theses and Dissertations

Sheepshead recently have seen an increase in fishing pressure in Virginian waters of the Chesapeake Bay. This increase in fishing pressure has led to demands to install effective management measures to protect the fishery. However, no study regarding the population dynamics, and thus potential yield, of sheepshead has been conducted north of Cape Hatteras. We addressed the need for information regarding the population dynamics of Chesapeake Bay sheepshead by investigating their age distribution, growth rate and reproductive biology. We used this information to construct yield-per-recruit models, which local management agencies may use in the formation of scientifically based management measures. …

Experimental Quantification Of Nutrient Bioextracti On Potential Of Oysters In Estuarine Waters Of New Hampshire, Raymond E. Grizzle, Krystin M. Ward

PREP Reports & Publications

This project was a short-term field experiment conducted in summer 2010 and designed to provide preliminary data on the bioextraction (removal) of carbon (C) and nitrogen (N) for two different size classes (both <76mm shell height) of eastern oysters (Crassostrea virginica) at six sites in the Great Bay estuarine system in New Hampshire. Sites were chosen to represent a range of ambient nutrient concentrations, water flow conditions, and location within the estuary. Two of the sites were at oyster aquaculture farms: Granite State Shellfish at the mouth of the Oyster River, and Little Bay Oyster Company near Fox Point in Little Bay. At each site, …