Animal Sciences Commons^™

Study Of Three Potential Variables That May Impact The Maximum Shear Force And Shear Variation During The Growth And Transport Of Mixed Sex Broilers Grown In Commercial Poultry Houses, Mark Christie

Graduate Theses and Dissertations

Temperature conditions during the transportation to the processing facility of commercial broilers have a direct impact on the meat texture, specifically maximum shear force and shear variation of cooked breast meat. Analysis of a calendar year of flock data (N=346), reveals that the largest impact of transport conditions, specifically temperature, is on the standard deviation of the flocks range of cooked shear values. The optimal transport temperature that yields broiler breast meat with average flock minimum shear and standard deviation values is approximately 60°F. The shear values for flocks at or near 60°F are on average 1 kg less than …

Vegetation Characteristics And Bird Communities Associated With Singing Painted Buntings In Northwest Arkansas, Lauren Kristina Thead

Graduate Theses and Dissertations

It has been shown that bird communities are affected by the species composition and physical structure of plant communities. Within avian communities, the bird species that are the most localized in distribution tend to be the most affected by habitat changes. My research analyzed plant and bird communities found with the Painted Bunting (Passerina ciris Linnaeus), a locally common but declining species throughout much of its range. First, I describe vegetation characteristics associated with singing male Painted Buntings in northwest Arkansas. I categorized field sites with singing male Painted Buntings as either managed for wildlife or unmanaged, based on land-use …

The Study Of Alcoholic Liver Diseases, Seun Emmanuel Owoseni

Electronic Theses and Dissertations

Excessive alcohol consumption is the primary contributing factor in the development of alcoholic liver diseases (ALD). Nicotine contained in tobacco is a major addictive alkaloid, which enhances the effects of ALDs. The major enzyme involved in nicotine metabolism is cytochrome P450 2A5 (CYP2A5) which is produced in the liver. Alcohol can stimulate the CYP2A5 enzyme. We utilized cyp2a5-/- knockout mice in this research to examine the effects of CYP2A5.

The cyp2a5-/- mice and wild-type (WT) mice were fed liquid ethanol diet with or without nicotine to induce ALD. Nicotine enhancing effects on ALD were observed in WT mice but not …

Responsiveness Of Cobb Mv × 700 Broilers To Dietary Amino Acid And Energy Density, Craig William Maynard

Graduate Theses and Dissertations

As new broiler crosses are introduced to the industry, it is of paramount importance to understand their nutritional digressions from previous and other modern broilers. In particular, amino acids (AA) and dietary energy have been identified as key drivers of live performance and carcass composition. In addition, increased nutrient density in broiler diets have been linked to an increase in breast muscle myopathies such as white striping and woody breast. Therefore, a series of trials were conducted to determine the responsiveness of live performance, carcass characteristics, and breast muscle myopathies of Cobb MV × 700 broilers to dietary AA and …

Fall Migration And Winter Habitat Use Of Northern Saw-Whet Owls (Aegolius Acadicus) In The Ozark Highlands, Mitchell L. Pruitt

Graduate Theses and Dissertations

Studying movement ecology is important not only in understanding the distribution of a species, but in understanding the magnitude of migration through certain regions, as well as explaining regional differences in demographics. The Northern Saw-whet Owl (Aegolius acadicus) is a small, migratory forest owl found throughout much of North America. Despite being captured widely during fall migration, the species’ movement ecology is poorly understood. Exploratory studies outside the saw-whet owl’s normal range have successfully captured the species during fall migration. In the Ozark Highlands ecoregion of the central United States, their status has been considered vagrant during fall and winter. …

Effect Of Macrograzers (Campostoma Spp. And Faxonius Spp.) On Periphyton In Ozark Streams With Considerations Given To Macrograzer Biomass, Phosphorus, And Season: Mensurative And Manipulative Studies, Kayla R. Sayre

Graduate Theses and Dissertations

Nutrient and benthic algal biomass relationships can guide numeric nutrient criteria development in lotic systems. However, herbivorous macrograzers may confound this relationship by reducing the slope of the positive relationship between nutrients and periphyton biomass in streams. I conducted a mensurative field study to determine if stoneroller and crayfish abundance related to algal biomass at varying nutrient concentrations and manipulated macrograzer presence with electrical exclosures in streams to examine macrograzer effects on algal biomass and understand whether these effects on periphyton varied with total phosphorus (TP) or season. Macrograzer density was quantified across a TP gradient (n=15 streams; range = …

The Evaluation Of Genetic And Phenotypic Differences Associated With Short Term Selection Of Four Different Feed Efficiency Strategies In Japanese Quail, Alex David Gilley

Graduate Theses and Dissertations

The concept of feed efficiency (FE), one unit of feed required to improve one unit of desired output, is relatively simple. However multiple outputs are desired in a commercial poultry breeding program, resulting in the need for nutrients to be partitioned in a particular manner. At the broadest level, nutrients are partitioned between production and maintenance requirements. The requirements for production and maintenance varies between birds. It is the poultry breeder’s responsibility to select individuals most aligned with the breeding objective. Irrespective of the breeding objective, various related and non-related traits influence a bird’s FE. To effectively improve FE, the …

Optimizing Methods To Determine Metabolizable Energy Values Of Feed Ingredients For Broilers, Skyler P. West

Graduate Theses and Dissertations

Determination of metabolizable energy (ME) and amino acid (AA) digestibility values of single feed indigents continues to be two of the most important aspects for successful least-cost poultry feed formulation. It would be advantageous if a common diet type could be utilized to determine both ME and AA digestibility values of feed ingredients within a single assay. Two experiments were conducted to evaluate the effect of basal diet type and excreta collection method on the ME value of single feed ingredients determined in broiler chicks using the regression method. In experiment 1, the objective was to investigate the influence of …

Efficacy Of Natural Compounds With Novel Carrier Systems For Controlling Campylobacter Jejuni In Post-Harvest Poultry, Sandip Shrestha

Graduate Theses and Dissertations

Campylobacter jejuni, a leading cause of bacterial gastroenteritis worldwide, is strongly associated with the consumption and/or mishandling of raw contaminated poultry products. Thus, interventions aiming to reduce C. jejuni counts on poultry products could greatly reduce the incidence of human campylobacteriosis. In the first study, the efficacy of a generally recongnized as safe (GRAS) compound, carvacrol (CR; derived from oregano oil), as an antimicrobial wash treatment to reduce C. jejuni on chicken skin was evaluated. Three delivery systems of CR: suspension, emulsion and nanoemulsion were used. C. jejuni counts were reduced up to 4 log10 cfu/sample by 2% dose of …

Development And Application Of A Reverse Genetics System For Zika Virus, Jordan C. Frank

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Zika virus (ZIKV) has emerged in many regions of the world, with infection outcomes spanning from no apparent illness to crippling nervous system disease. ZIKV and its close relatives, West Nile virus, Japanese encephalitis virus, dengue virus, and yellow fever virus are primarily transmitted by mosquitoes. Three ZIKVs were selected: MR-766 (Uganda, 1947), P6-740 (Malaysia, 1966), and PRVABC-59 (Puerto Rico, 2015), whose place of origin and time of isolation differ substantially. Stable, complementary DNA (cDNA) copies of the three ZIKV RNA genomes were cloned to examine the significance of viral and host genetic variations in directing ZIKV infection outcomes. Using …

Influence Of Environmental Variables On Survival Rates Of Pronghorn (Antilocapra Americana) Neonates Across Idaho, Brett R. Panting

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study was completed to better understand pronghorn antelope (Antilocapra americana) populations found throughout Idaho. Antelope were studied in three separate and distinct study areas. The Big Desert, Camas Prairie, and Little Lost and Pahsimeroi valleys were all selected as study sites. Idaho Department of Fish and Game (IDFG) is concerned with current pronghorn populations found throughout Idaho. Pronghorn are a valued big game species found in Idaho. Increasing pronghorn populations in Idaho is a focus of IDFG.

We captured and VHF-collared pronghorn fawns found in our three study areas. Fawns were monitored daily with telemetry equipment for …

Bats Of Saint Lucia, Lesser Antilles, Scott C. Pedersen, Gary G. Kwiecinski, Hugh H. Genoways, Roxanne J. Larsen, Peter A. Larsen, Carleton J. Phillips, Robert J. Baker

University of Nebraska State Museum: Mammalogy Papers

Eight species of bat have been previously recorded from the island of Saint Lucia: Noctilio leporinus, Monophyllus plethodon, Artibeus jamaicensis, Brachyphylla cavernarum, Ardops nichollsi, Sturnira paulsoni, Molossus molossus, and Tadarida brasiliensis. Herein, we add a ninth species to the fauna—Pteronotus davyi. These nine species represent nine genera from four families: Noctilionidae, Mormoopidae, Phyllostomidae, and Molossidae. This fauna includes four trophic guilds: N. leporinus (piscivore/insectivore), M. plethodon (nectarivore/pollenivore), A. jamaicensis × schwartzi, B. cavernarum, A. nichollsi, and S. paulsoni (frugivores), and P. davyi, M. molossus, and …

Multi-Metric Conservation Assessment For The Imperiled Clinch Dace, Michael James Moore, Donald J. Orth, Eric M. Hallerman

Southeastern Fishes Council Proceedings

Planning frameworks allow managers to spatially prioritize actions to promote species conservation. Traditional aquatic conservation planning frameworks are often organized at the ecological community or ecosystem level, which often neglect imperiled taxa occupying species-poor assemblages. In this study, we develop a multi-metric conservation assessment for the 15 geographically distinct candidate conservation areas (CCAs) occupied by the imperiled Clinch Dace (Chrosomus sp. cf. saylori). Clinch Dace habitat is threatened by anthropogenic landscape alterations, especially for coal mining and timber harvest. Our framework used four metrics to assess the conservation value of each subpopulation of Clinch Dace namely: “habitat …

Profitability Of Developing Beef Heifers On Stockpiled Winter Forages, Zachary David Mcfarlane, Chris Boyer, J. Travis Mulliniks

Journal of Applied Farm Economics

We estimate the profitability of developing heifers on one stockpiled cool-season grass and two stockpiled warm-season grasses during the winter months by comparing distributions of net present value (NPV) over an 11-year useful life. Furthermore, distributions of payback period and the break-even price for each calf over the heifer’s production life were generated for each forage species. These results are compared across forages as well as to a simulated drylot system for heifer development. Data comes from a grazing experiment in Tennessee, where heifers grazed big bluestem and Indian grass combination (BBIG), switchgrass (SW), or endophyte-infected tall fescue (TF) pastures. …

Automatic Identification Of Animals In The Wild: A Comparative Study Between C-Capsule Networks And Deep Convolutional Neural Networks., Joel Kamdem Teto, Ying Xie

Master of Science in Computer Science Theses

The evolution of machine learning and computer vision in technology has driven a lot of

improvements and innovation into several domains. We see it being applied for credit decisions, insurance quotes, malware detection, fraud detection, email composition, and any other area having enough information to allow the machine to learn patterns. Over the years the number of sensors, cameras, and cognitive pieces of equipment placed in the wilderness has been growing exponentially. However, the resources (human) to leverage these data into something meaningful are not improving at the same rate. For instance, a team of scientist volunteers took 8.4 years, …

Cryptic Diversity In The Mexican Highlands: Thousands Of Uce Loci Help Illuminate Phylogenetic Relationships, Species Limits And Divergence Times Of Montane Rattlesnakes (Viperidae: Crotalus ), Christopher Blair, Robert W. Bryson Jr, Charles W. Linkem, David Lazcano, John Klicka, John E. Mccormack

Publications and Research

With the continued adoption of genome‐scale data in evolutionary biology comes the challenge of adequately harnessing the information to make accurate phylogenetic inferences. Coalescent‐based methods of species tree inference have become common, and concatenation has been shown in simulation to perform well, particularly when levels of incomplete lineage sorting are low. However, simulation conditions are often overly simplistic, leaving empiricists with uncertainty regarding analytical tools. We use a large ultraconserved element data set (>3,000 loci) from rattlesnakes of the Crotalus triseriatus group to delimit lineages and estimate species trees using concatenation and several coalescent‐based methods. Unpartitioned and partitioned maximum …

The Relative Effects Of Forest Amount, Forest Configuration, And Urban Matrix Quality On Forest Breeding Birds, Alexandra V. Shoffner, Andrew M. Wilson, Wenwu Tang, Sara A. Gagné

Environmental Studies Faculty Publications

Urbanization modifies landscape structure in three major ways that impact avian diversity in remnant habitat: habitat amount is reduced and habitat configuration and matrix quality are altered. The relative effects of these three components of landscape structure are relatively well-studied in agricultural landscapes, but little is known about the relative effect of urban matrix quality. We addressed this gap by investigating the relative effects of forest amount, forest configuration, and matrix quality, indicated by degree of urbanization and agriculture amount, on the diversity of three guilds of forest birds using data from 13,763 point counts from Pennsylvania, USA. Forest amount …

Pathogenesis Of Rift Valley Fever Virus Aerosol Infection In Stat2 Knockout Hamsters, Brady T. Hickerson, Jonna B. Westover, Arnaud J. Van Wettere, Johanna D. Rigas, Jinxin Miao, Bettina L. Conrad, Neil E. Motter, Zhongde Wang, Brian B. Gowen

Animal, Dairy, and Veterinary Science Faculty Publications

Rift Valley fever virus (RVFV) is an emerging pathogen capable of causing severe disease in livestock and humans and can be transmitted by multiple routes including aerosol exposure. Several animal models have been developed to gain insight into the pathogenesis associated with aerosolized RVFV infection, but work with these models is restricted to high containment biosafety level (BSL) laboratories limiting their use for antiviral and vaccine development studies. Here, we report on a new RVFV inhalation infection model in STAT2 KO hamsters exposed to aerosolized MP-12 vaccine virus by nose-only inhalation that enables a more accurate delivery and measurement of …

Courtship Behavior, Communication, And Copulation In Tigrosa Annexa, Samuel White

Scholars Week

The evolution of multimodal communication, where signalers use multiple signal components in multiple sensory modalities, has become the subject of investigation by many researchers. Signaling puts males at risk of predation, so why do males of some species evolve extra signals that may increase this risk? In some wolf spider species, males incorporate many visual and vibrational signals into a display that they use to attract a female for mating. Female spiders are often aggressive toward courting males and so the male display also functions to decrease the odds of cannibalism. Female wandering spiders deposit silk containing pheromones that communicate …

Improved Reference Genome For The Domestic Horse Increases Assembly Contiguity And Composition, Theodore S. Kalbfleisch, Edward S. Rice, Michael S. Depriest Jr., Brian P. Walenz, Matthew S. Hestand, Joris R. Vermeesch, Brendan L. O'Connell, Ian T. Fiddes, Alisa O. Vershinina, Nedda F. Saremi, Jessica L. Petersen, Carrie J. Finno, Rebecca R. Bellone, Molly E Mccue, Samantha A. Brooks, Ernest Bailey, Ludovic Orlando, Richard E. Green, Donald C. Miller, Douglas F. Antczak, James N. Macleod

Maxwell H. Gluck Equine Research Center Faculty Publications

Recent advances in genomic sequencing technology and computational assembly methods have allowed scientists to improve reference genome assemblies in terms of contiguity and composition. EquCab2, a reference genome for the domestic horse, was released in 2007. Although of equal or better quality compared to other first-generation Sanger assemblies, it had many of the shortcomings common to them. In 2014, the equine genomics research community began a project to improve the reference sequence for the horse, building upon the solid foundation of EquCab2 and incorporating new short-read data, long-read data, and proximity ligation data. Here, we present EquCab3. The count of …

Does Experience With Sagebrush In Utero And Early In Life Influence Use Of Sagebrush By Sheep?, Juan J. Villalba, Fred Provenza, Ashley Longmore

Poisonous Plant Research (PPR)

Learning from mother begins early in the developmental process and can have lifelong effects when it comes to foraging behavior. Pregnancy is not just an incubation period but a starting point for animal well-being and disease later in life. A better understanding of the effects that early exposure to unpalatable feeds impinges on their use later in life may help create management plans that utilize grazing animals to their full potential as landscape manipulators.

Thus, the objective of this research was to explore how experience in utero and early in life with sagebrush (Artemesia tridentata spp. tridentata) -a …

No Evidence For Kin Protection In The Expression Of Sickness Behaviors In House Mice, Patricia C. Lopes, Per Block, Alice Pontiggia, Anna K. Lindholm, Barbara König

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

When infected, animals change their behaviors in several ways, including by decreasing their activity, their food and water intake, and their interest in social interactions. These behavioral alterations are collectively called sickness behaviors and, for several decades, the main hypotheses put forward to explain this phenomenon were that engaging in sickness behaviors facilitated the fever response and improved the likelihood of host survival. However, a new hypothesis was recently proposed suggesting that engaging in sickness behaviors may serve to protect kin. We tested this kin protection hypothesis by combining a field and a laboratory experiment in house mice. In both …

Habitat Segregation Between Brown Bears And Gray Wolves In A Human-Dominated Landscape, Cyril Milleret, Andrés Ordiz, Guillaume Chapron, Harry Peter Andreassen, Jonas Kindberg, Johan Månsson, Aimee Tallian, Petter Wabakken, Camilla Wikenros, Barbara Zimmermann, Jon E. Swenson, Håkan Sand

Ecology Center Publications

Identifying how sympatric species belonging to the same guild coexist is a major question of community ecology and conservation. Habitat segregation between two species might help reduce the effects of interspecific competition and apex predators are of special interest in this context, because their interactions can have consequences for lower trophic levels. However, habitat segregation between sympatric large carnivores has seldom been studied. Based on monitoring of 53 brown bears (Ursus arctos) and seven sympatric adult gray wolves (Canis lupus) equipped with GPS collars in Sweden, we analyzed the degree of interspecific segregation in habitat selection …

Factors Affecting Trailer Thermal Environment Experienced By Market Pigs Transported In The Us, Y Xiong, Richard S. Gates, Angela R. Green-Miller

Department of Animal Science: Faculty Publications

Extreme weather conditions challenge pig thermoregulation during transport and are addressed by the National Pork Board (NPB) Transport Quality Assurance® (TQA) program that provides guidelines for trailer boarding, bedding, and misting. These guidelines are widely applied, yet very little is known about the microenvironment within the trailer. In this study, TQA guidelines (V4) were evaluated via extensive thermal environment measurements during transport in order to evaluate spatial variability and implications on ventilation pattern. Effects of trailer management strategies including bedding, boarding, and misting were examined and the trailer was monitored for interior temperature rise and THI responses within six separate …

Transforming Lives In Coastal Communities Through Economic Development: Breeding Crassostrea Virginica For Alternative Oyster Culture, Brian Randall Callam

LSU Doctoral Dissertations

This dissertation helped address the commercialization of triploid Crassostrea virginica production and develop tetraploid C. virginica broodstock in Louisiana by addressing triploid commercialization and tetraploid broodstock development. This was done by: 1) developing regional breeding plans for diploid and tetraploid C. virginica targeted at the Gulf Coastal Region, 2) assessing the effect of chromosome set manipulation on gonadal development in diploid, triploid, and tetraploid C. virginica, 3) quantifying the variation of commercially important hatchery traits in triploid C. virginica larvae from different tetraploid parents, 4) developing an up-to-date remote setting manual for the Gulf Coastal Region for industry use, …

Influence Of Crossbreeding On Meat Goat Doe Fitness When Comparing Boer F1 With Base Breeds In The Southeastern United States, Piush Khanal, Maria L. Leite-Browning, Richard Browning Jr.

Agricultural and Environmental Sciences Faculty Research

Understanding fitness level among various breeds is essential for sustainable meat goat production. Research on the relative fitness of Boer F₁ does and straightbred base breed has been limited. Meat goat does of various genotypes (Boer, Kiko, Spanish, Boer × Kiko reciprocal F₁ crosses, and Boer × Spanish reciprocal F₁ crosses) were studied to evaluate breed effects on doe fitness traits and the expression of heterosis over 7 production years. The herd was semi-intensively managed under humid subtropical pasture. Doe age affected (P < 0.05) various traits. Boer × Kiko does were heavier (P < 0.05) than Boer does at fall breeding, but Boer × Spanish does did not differ (P > 0.05) from Boer does for breeding weight. The body weights of …

Integrate Use Of Drones And Qr Codes As Complementary Components For Monitoring, Control And Surveillance Systems For Artisanal Fishing Vessels In Peru, Eduardo Israel Zamora Chung

World Maritime University Dissertations

This dissertation aims to design a new monitoring, control and surveillance (MCS) component that may be suitable for Peruvian artisanal fishing. When it refers to suitable, it means that it should be low-cost and compatible with other MCS systems to improve the fight against Illegal, Unreported and Unregulated (IUU) fishing. In this regard, through the triangulation among methods including the content analysis as well as interviews and questionnaires to the primary stakeholders of the Peruvian artisanal fishing, it was found that there is a direct connection between a suitable MCS and the fulfilment of the target 14.b of the Sustainable …

Compliance And Enforcement For The Exclusive Economic Zone Fisheries Management In The United Republic Of Tanzania, Christian Alphonce Nzowa

World Maritime University Dissertations

No abstract provided.

Community-Based Organisations As An Approach To Effective Sustainable Artisan Fishing, Mary Mindi Wabit Epse Ngawana

World Maritime University Dissertations

Fishing in Cameroon is one of the main economic activities and lifeline of the coastal communities in the South West Region of Cameroon, especially the artisanal fishing which is mostly traditional and subsistence. Cameroon fisheries are either fully exploited or are already in the critical state of over-exploitation by foreigners and local communities. However, illegal fishing and aggressive fishing practices in the marine environment has led to over exploitation of the fisheries, mangroves and environmental deterioration. There is an urgent need to develop and introduce effective and efficient sustainable approaches, to the exploitation and management of Cameroon’s fisheries and other …

Iuu Fishing : A Gateway To Transnational Crimes In Jamaica, Judy-Ann Icinda Neil

World Maritime University Dissertations

No abstract provided.