Animal Sciences Commons^™

Infestation By Phorid Flies Disrupts Behavior And Immune Function In Honey Bees Monitored By Radio-Frequency Identification, Gloria Ruiz-Guzmán, Oliverio Delgado-Carrillo, Francisco J. Balvino-Olvera, María De Jesús Aguilar-Aguilar, Violeta Patiño-Conde, Paulo De Souza, Ulises Olivares-Pinto, Mauricio Quesada

Research outputs 2022 to 2026

Honey bees (Apis mellifera Linnaeus) are important pollinators in natural and agricultural ecosystems and play a key role in global food production. However, colonies are increasingly affected by multiple stressors, including emerging parasites, which can compromise their health and performance. Among these, phorid flies (Diptera: Phoridae) have been observed in association with weak or collapsing honey bee colonies in various regions in Mexico, yet their effects on honey bee behavior and immune function under field conditions remain poorly understood. In this study, we investigated the impact of a phorid fly infestation on the behavior, survival, and immune defense of A. …

Cow Size And Reproductive Efficiency: A Western Ranch Perspective, David Secrist

All Current Publications

Production costs and reproductive efficiency are critical elements to the survival of cow-calf operations in the West. A cow’s ability to produce a healthy calf at a marketable weight is closely tied to her maintenance requirements and management’s ability to meet those needs from ranch resources at a low cost. This fact sheet explores public-land grazing, cow reproductive efficiency, and solutions for producers.

Carbamate Toxicosis In Carnaby’S Cockatoos (Zanda Latirostris) In A Drying Climate, A Le Souef, Z M. Kissane, David Forshaw, K J. Riley, K Payne, T Hawkins, J Coggins, J M. Shephard, R Vaughn-Higgins, K S. Warren

Climate Science Research Articles

Pesticide exposure poses a growing threat to the health of wild avian populations worldwide. This report documents the first detections of agricultural chemicals in the tissues of wild Carnaby’s cockatoos (Zanda latirostris) in Western Australia. The events, characterised by morbidity and mortality, occurred in a national park near Perth, following periods of elevated summer temperatures over two seasons. Toxicological analysis of liver and digestive tract contents identified multiple pesticides and an herbicide, including methomyl, a highly toxic carbamate insecticide. Hot weather conditions preceding the events potentially increased the cockatoos’ use of alternative water sources for drinking, such as those in …

The Economics Of Calving Interval, David Secrist

All Current Publications

This fact sheet provides information on cow reproductive efficiency to increase ranch profitability. It discusses monitoring the herd, heifers, mature cows, and calf prices.

Exploring The Significance Of Kenya's Indigenous And Emerging Blue Foods For Sustainable Aquaculture Development. A Review, Jonathan Munguti, Mavindu Muthoka, Domitila Kyule, Esther Magondu, Kevin Obiero, Jimmy Mboya, Menaga Meenakshisundaram, Tanga M. Chrysantus, Gerald Kwikiriza, Francis K. Njonge

All Peer-Reviewed Publications

Kenya's aquaculture sector is at a pivotal stage, transitioning from a historical reliance on Nile tilapia and African catfish toward a more diversified production portfolio that integrates indigenous and emerging freshwater and marine species. This shift is increasingly recognized as essential to enhance climate resilience, food security, and ecosystem health. This systematic review synthesizes more than two decades (2000 to 31st January, 2026) of peer-reviewed literature to evaluate the biological suitability, culture performance, and socio-ecological roles of underutilized native taxa, including Ningu (Labeo victorianus), Jipe tilapia (Oreochromis jipe), freshwater prawns (Macrobrachium spp.), rabbitfish (Siganus sutor), marine-acclimatized Nile tilapia, mud crab …

Genomic Vulnerability Of A Threatened Possum In A Biodiversity And Climate Change Hotspot, Grace I. Marsh, Sean James Buckley, Daniel J. White, Adrian F. Wayne, Bryony J. Palmer, Nicola J. Mitchell

Research outputs 2022 to 2026

Spatial variation in the magnitude and pace of climate change impacts means some species will be more affected than others. This includes those occurring within global biodiversity hotspots, regions with exceptional concentrations of endemic species that have often been shaped by long-term climatic stability. Disproportionate levels of human-induced pressure in these areas are threatening much of the biodiversity values that make these biodiversity hotspots exceptional. Southwest Western Australia is a highly fragmented temperate biodiversity hotspot experiencing rapid climate change and supporting many species of threatened mammals. One Critically Endangered arboreal folivore, the western ringtail possum (ngwayir; Pseudocheirus occidentalis), has contracted …

Phenotypic Variation Between Surface And Cave-Adapted Poeciliids And Its Effect On Metabolism, Karch Knipp, Michael Tobler, Soren Johnson

Undergraduate Research Symposium

Cave-adapted organisms often exhibit pronounced morphological changes relative to their surface counterparts, a phenomenon known as troglomorphy. In Poecilia mexicana (Atlantic molly), these differences include variation in coloration between surface and cave populations. Troglobitic organisms also typically exhibit reduced metabolic rates, likely as an adaptation to environments with low primary productivity. This makes P. mexicana an ideal system for investigating the evolution of metabolic traits. In this study, we leveraged variation in coloration among cave-dwelling mollies to examine potential associations with resting metabolic rate (RMR). Coloration was quantified using PCR values, and individuals were categorized as “yellow” or “non-yellow.” We …

Relationship Between Morphological And Behavioral Laterality In Astyanax Mexicanus, Allison Lendman, Michael Tobler, Erik Johnson

Undergraduate Research Symposium

Populations within the Astyanax genus have experienced extreme differences in environment, leading to distinct morphological adaptations. The cave populations of these fish are eyeless and have acquired fixed, cranial asymmetries. We explored a possible relationship between this physical asymmetry and behavioral laterality. We tested 28 adult fish, 14 male and 14 female, from the Pachón cave in controlled behavioral trials. We found that both sexes demonstrated behavioral laterality, observed as a consistent left-turn bias in these trials. This supports the hypothesis that these populations display behavioral laterality that is correlated to their physical asymmetries. Ongoing research comparing behavioral patterns in …

Under The Surface: Human Disturbance Reduces Species Richness In Glade Microhabitats, Maddie Smith, Becky Hansis-O'Neill, Aimee Dunlap Phd

Undergraduate Research Symposium

Human disturbance can alter microhabitats in ways that affect biodiversity, especially in sensitive ecosystems like glades where many animals rely on rocks for thermoregulation and refuge. This study examined how rock displacement by human activity influences species richness and community composition in glade habitats at Shaw Nature Reserve and Victoria Glades Conservation Area. We hypothesized that disturbed rocks would be less suitable for wildlife and would support fewer species. From September to November 2025, about 30 rocks per site were pseudo-randomly selected and monitored. Each rock was classified as displaced or nondisplaced, and all organisms found beneath them were recorded. …

Home On The Range: Where Deer And Antelope Compete With Feral Horses For Limited Resources, Katelyn Davies, Hannah B. Klugman, Kathryn A. Schoenecker, David C. Stoner

All Current Publications

Given projections for continued drought conditions in the West, a better understanding of how native wildlife respond to competition with feral horses will be critical for developing effective conservation programs in the future. This fact sheet provides information on feral horses and presents study data comparing their use of water resources with that of native wildlife.

Temporary Cattle Identification: Benefits Of Marking With Hair Bleach, Melanie Heaton, Reganne K. Briggs, Rebekah Iverson, Brooke Holgate, David Secrist

All Current Publications

Temporary identification is an important management tool for beef producers. Animals are routinely marked following breeding, pregnancy diagnosis, vaccination, treatment, sorting, shipping, and marketing so they can be quickly identified without repeated handling. Effective temporary identification improves labor efficiency, reduces animal stress, and helps ensure management decisions are applied to the correct animals. This fact sheet provides information on temporary cattle marking using hair bleach.

Historical Chaos Among Tetrabothriideans (Eucestoda) Of Odontocetes (Artiodactyla)—Revising Generic Taxonomy And Species Diversity For Cestodes Among Oceanic Dolphins, Eric P. Hoberg, Kaylen Marie Soudachanh, Robert L. Rausch

MANTER: Journal of Parasite Biodiversity

Explorations over the past 150 years that have defined the diversity and structure of the tetrabothriidean cestode fauna among Odontocete cetaceans (Artiodactyla) are summarized and reviewed. Persistent errors in interpretation of comparative morphological characters, inconsistent taxonomic decisions, and an understanding of generic-level and species diversity are addressed. We outline a revision of the Tetrabothriidea, which now encompasses 8 genera. Prosthecocotyle is resurrected from synonymy with Tetrabothrius, and Cetaceobothridius n. gen is proposed. A clear basis is outlined for differentiation of generic and species diversity among Cetaceobothridius, Priapocephalus, Prosthecocotyle, Strobilocephalus, Tetrabothrius, and Trigonocotyle that constitute the tetrabothriidean fauna of odontocetes; species …

Impacts Of Sprouted Barley On Performance And Carcass Ultrasound Measurements In Angus-Influenced Steers During Backgrounding, Zachary C. Crump, Anthony Fernando Alberto, Bailee L. Brown, Bryce W. Roholt, Lillian L. Okamoto, Ryan A. Spurling, Robert E. Ward, Brady M. Blackett, Robert L. Harding, Sanjeewa D. Ranathunga, Kara J. Thornton

Animal, Dairy, and Veterinary Science Faculty Publications

The objective of this research was to determine the impacts of including sprouted barley (SB) in the diets of backgrounding beef steers. Angus-influenced steers (328 ± 6.59 kg) were assigned to one of four diets (n = 15/diet): a control (CON) diet, or a diet containing 5%, 10%, or 20% SB (DM basis)—replacing corn silage and some rolled barley. Individual intake and feeding behavior were monitored using Vytelle bunks. Body weight (BW) and ruminal fluid samples were collected on d 0, 30, and 60, while dry matter intake (DMI), feeding behavior, average daily gain (ADG), and gain-to-feed ratio (G:F) were …

Bathurst Burr And Its Control, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

Bathurst burr (Xanthium spinosum) is a declared pest in Western Australia (WA). This factsheet describes the nature of the plant, requirements land owners/occupiers must adhere to, control methods, and how to search, detect, and report it.

Bathurst burr is a summer growing annual shrubby plant originating in South America. In south west Australia, some mature plants survive well into winter, with the result that burrs may be found for most of the year. The weed spreads entirely by burrs, which are usually carried by people or animals, attached to clothes, fur, or other fibre by their hooked spines. They may …

Noogoora Burr And Its Control, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

Noogoora burr, also known as cocklebur (Xanthium strumarium), is a declared pest in Western Australia (WA). This factsheet describes the nature of the plant with links to requirements that land owners/occupiers must adhere to and control methods.

Native to western United States of America. Locally abundant in parts of the Kimberley, especially near water courses. Occasionally found in the South West region of WA.

Genomic Investigation Of Population Structure In A Secretive, Semi‐Fossorial Snake (Colubridae: Tropidoclonion Lineatum) Across The Great Plains, Taylor Probst, Cameron D. Siler, Drew R. Davis

School of Integrative Biological & Chemical Sciences Faculty Publications

With advances in genomic technologies, it has become increasingly feasible to generate large numbers of loci to address population genetic and phylogeographic questions. Nevertheless, many widespread and relatively abundant species remain unsampled using molecular approaches. The lined snake ( Tropidoclonion lineatum ), a semi‐fossorial snake distributed across the Great Plains, is one such example. Despite the historical recognition of multiple subspecies based on noted variation in morphological characters, no formal molecular investigation of population structure has been conducted to date due to a paucity of vouchered genetic samples. Here, we present the first genomic assessment of range‐wide population structure in …

Cattle Industry Funding Scheme 2024-25 Annual Report, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity published reports

The Cattle IFS addresses pest and disease threats relevant to the biosecurity of the WA Cattle industry and currently operates across the whole of WA. The IFS contribution is paid on the sale of cattle (0.20 cents per head/carcass) produced within WA.

Killer Whales (Orcinus Orca) In The Indo-Pacific: A Review Of Their Distribution, Population Structure, And Ecology, Paola Lacetera, Paul Tixier, Isabella M. Reeves, Maeva Terrapon, Aaron Barnes, Christophe Guinet, Simon H. Elwen, John Totterdell, Jennah Tucker, Paul Cross, Georgia K. Bisset, John Dickie, John P.Y. Arnould

Research outputs 2022 to 2026

Aim: Killer whales, Orcinus orca, are cosmopolitan top predators showing highly variable ecology and behaviour across populations. In the Indo-Pacific, baseline knowledge in general remains scarce, limiting the assessment of their vulnerability to the accelerated environmental changes, including expanding fisheries this region is undergoing.

Methodology: This review synthesises 170 sources found between 2000–2025 to evaluate the current knowledge on distribution, population structure, and feeding ecology (including depredation) of killer whales in the Indo-Pacific, and to identify priorities for future research and management.

Results: Occurrence was highly variable, from sporadic sightings in most tropical sectors to seasonal and year-round presence at …

Determining The Feasibility Of A Habituation Assessment In Managed Red Wolves, Emily C. Lynch, Joseph W. Hinton, Jennifer B. Nagashima, Curtis Malott, Natalie J. Johnson, Emily Haering, Robin Petersen, Allison Johnson, Julie K. Young

Wildland Resources Faculty Publications

For species extirpated from the wild, ex situ breeding programs are essential for providing the individuals necessary for re-establishing wild populations through reintroductions. However, repeated exposure to humans under managed care may reduce wariness and alter behavioral responses in ways that are maladaptive after release. Although some pre-release behaviors reflect natural responses essential for survival and reproduction, others may result from habituation to humans and increase the risk of conflict, recapture, or mortality following translocation. These risks underscore the need for behavioral assessments to help identify appropriate candidates for release. However, because the assessments themselves require some exposure to humans, …

Cross-Reactivity Of 15 Jev Antigen-Directed Rabbit Antisera With Three Clinically Important Jev Serogroup Members: Wnv, Mvev, And Slev, Sang-Im Yun, Young-Min Lee

Animal, Dairy, and Veterinary Science Faculty Publications

Japanese encephalitis virus (JEV), the prototype member of the JEV serogroup within the genus Orthoflavivirus (family Flaviviridae), is closely related to West Nile virus (WNV), Murray Valley encephalitis virus (MVEV), and St. Louis encephalitis virus (SLEV). To characterize antigenic cross-reactivity within this group, we evaluated 15 region-specific rabbit antisera, previously generated against nearly the entire JEV protein-coding region, by immunoblotting whole-cell lysates from BHK-21 cells infected with WNV, MVEV, or SLEV, with JEV included as a reference. Six antisera (α-E^N-term, α-NS2B, α-NS3^N-term, α-NS3^C-term, α-NS5^N-term, and α-NS5^C-term) robustly recognized homologous …

Characterizing Water Source Selection By Pinyon Jays (Gymnorhinus Cyanocephalus) In Utah, Audrey H. Biser, Randy T. Larsen, Samuel B. St. Clair, Steven L. Petersen

Student Works

Pinyon jays (Gymnorhinus cyanocephalus) are corvids native to semiarid ecosystems of the western US. Populations have declined by 84% since 1966, yet no causes have been identified and imminent decisions about federal status make understanding pinyon jay ecology increasingly urgent. As drought conditions intensify, water is becoming scarcer in systems that are already characterized by its limited availability. Therefore, pinyon jay decline is likely influenced by increasing aridity. Jays have been observed drinking from springs and artificial water sources in Utah; however, their relationship to water is poorly understood. Our study aims to characterize pinyon jay water source …

Fisheries Research Report No. 365: Recreational Fishing For Marron In South-West Western Australia In 2026, Claire B. Smallwood, Karina L. Ryan, Eva Lai

Fisheries Research Reports

The smooth marron (Cherax cainii) (‘marron’) is endemic to freshwater dams and rivers of south-west Western Australia. Marron are managed as a single stock within the South-West Recreational Freshwater Resource and are highly vulnerable to overexploitation due to the biological characteristics of the species (e.g., low fecundity, localised populations) as well as environmental (e.g., habitat loss, reduction in rainfall) and human (e.g., fishing, land clearing) pressures on freshwater ecosystems.

Due to this vulnerability, this species has been the focus of research, monitoring and management since the 1970’s. Since 2000, annual phone-recall (2000 – 2021) and online-recall (2022 – 2026) surveys …

Evaluating The Motivations Of Participants In Online Equine Extension Courses, Sarah Vos

Department of Animal Science: Dissertations, Theses, and Student Research

Traditional program evaluations emphasize participant demographics, knowledge gain, behavior change, and program impact. However, evaluating participant motivation can provide addition insight into why participants enroll in extension programs and help explain participant engagement and persistence throughout a program. The purpose of this study was to evaluate participant motivation in two online equine extension courses and examine potential relationships between motivation, demographics, and course delivery method, and describe participant engagement in Virtual Horse Judging Camp (VHJC). This cross-sectional study utilized convenience sampling of participants in two online equine extension courses, Horse Adult Leader Training and Educational Resource (HALTER) and VHJC. The …

Membrane Progestin Receptors Α And Β (Paqr7 And 8) Are Necessary For Oogenesis In Zebrafish, Md. Almamun Farid, Md. Razain Tanvir, Takumi Mouri, Eisei Tsutsumi, Md. Sohanur Rahman Sohan, Md. Ekramul Hasan, Md Saydur Rahman, Chihiro Yamamoto, Akiteru Maeno, Toshinobu Tokumoto

School of Integrative Biological & Chemical Sciences Faculty Publications

Paqr7 and paqr8 are genes encoding membrane progestin receptor αand β (mPRα and mPRβ, respectively), which are currently classified as members of the progestin and adipoQ receptor (PAQR) family. For mPRα, the first identified mPR gene, there are two paralogs in zebrafish, paqr7a and paqr7b. In order to elucidate the physiological functions of the mPR subtypes, we created gene knockout (KO) fish by editing seven paqr genes in zebrafish and analyzing their phenotypes. The null-mutant strains of paqr7a, paqr7b, and paqr8 presented no significant abnormalities in reproductive functions. Thus, we generated a triple-gene knockout (TKO) strain of …

Molecular Refinement Of The Taxonomy Of Pyrgulopsis Springsnails In Western North America, Michael K. Young, Kristine L. Pilgrim, Eric S. Miskow, Chante L. Lundskog, Kathryn E. Perez, Michael K. Schwartz

School of Integrative Biological & Chemical Sciences Faculty Publications

Springsnails in the genus Pyrgulopsis in western North America have long been a dilemma for taxonomists. Defining species boundaries has been complicated by the presence of undiscovered or cryptic taxa, range over- or underestimation, species complexes representing an unknown number of species, and named species synonymous with other taxa. To address these issues, we conducted an array of molecular species delimitation analyses using sequences from up to 2 mitochondrial and 2 nuclear genes from over 5000 specimens representing 140 of the 151 currently recognized taxa. These analyses reaffirmed most species hypotheses, favored synonymy for some taxa and redrawing of species …

Harnessing Kenyan Aquaculture Through Social Media: Impacts, Challenges And Strategic Directions, Domitila Kyule, Jonathan Munguti, Mavindu Muthoka, Esther Magondu, Menaga Meenakshisundaram, Chrysantus M. Tanga, Kevin Obiero, Cecilia Githukia

All Peer-Reviewed Publications

Aquaculture is increasingly important for food, nutrition and livelihoods in Kenya, but the sector still faces persistent constraints in extension delivery, farmer learning, input access, market coordination and information reliability. This review examines how social media and related digital communication tools are shaping aquaculture development in Kenya, with attention to impacts, challenges, governance needs and strategic directions. A systematic literature review of studies and institutional sources published between 2015 and 2025 was conducted. The search identified 388 records, of which 45 sources were included in the final synthesis after screening, eligibility assessment and quality appraisal. Because the evidence was heterogeneous, …

Tissue-Specific And Sex-Dependent Microbiome Structure In East African Cattle Ticks (Amblyomma Gemma And Rhipicephalus Pulchellus) And Their Bovine Hosts, Dennis Getange, Samson Mukaratirwa, Rua Khogali, Epaphrus Yuko, James Kabii, Joel L. Bargul, Jandouwe Villinger

All Peer-Reviewed Publications

Ticks and their vertebrate hosts share intimate ecological interactions that shape microbial community composition, with implications for tick fitness and pathogen transmission. However, the extent and specificity of tick–host microbial interactions remain poorly understood, particularly in East African tick species. Here, we characterised microbial communities across multiple tissue types from two economically important tick species (Amblyomma gemma and Rhipicephalus pulchellus) and their shared bovine host using 16S rRNA V1-V2 gene sequencing. We profiled haemolymph, midgut, salivary glands, and gonads from individual ticks (25 Am. gemma and 8 Rh. pulchellus), alongside 12 bovine blood samples. Microbiota were dominated by Proteobacteria, Firmicutes, …

Is There Mush-Room For Bettongs On Dirk Hartog Island? Environmental Dna Assessment Of Food Resource Availability For Fauna Translocations, Rebecca J. Quah, Saul J. Cowen, Kelly J. Rayner, Aaron J. Brace, Robert A. Davis, Harriet R. Mills, Anna J.M. Hopkins

Research outputs 2022 to 2026

Conservation translocations require careful assessment of dietary resources to ensure population viability. Here, we used environmental DNA metabarcoding to characterise fungal assemblages across three major habitat types on Dirk Hartog Island, Western Australia, prior to the planned reintroduction of two threatened mycophagous species: the boodie (Bettongia lesueur) and woylie (Bettongia ogilbyi). We detected 243 fungal ASVs, of which 75 represented taxa that are likely to produce macroscopic fruiting bodies accessible to mycophagous mammals. Ectomycorrhizal fungi dominated all habitats, with Pezizaceae being the most abundant family—a pattern consistent with known dietary preferences of both species across multiple Australian locations. Fungal community …

Surveys For Rare Springsnails In Southeast Oregon, 2025 With A Focus On The Donner Und Blitzen Pebblesnail (Fluminicola Insolitus), Jesse Laney

Institute for Natural Resources Publications

The Donner und Blitzen pebblesnail (Fluminicola insolitus) is a critically imperiled (G1/S1) freshwater snail historically known from a single spring, Page Springs, in the Donner und Blitzen River drainage of Harney County, Oregon. The species was petitioned for listing under the U.S. Endangered Species Act in February 2024. On January 26, 2026, the U.S. Fish and Wildlife Service published a positive 90-day finding initiating species status review (USFWS 2026).

In August 2025, the Oregon Biodiversity Information Center (ORBIC) at Portland State University, in coordination with the Nevada Division of Natural Heritage (NDNH), the U.S. Fish and Wildlife Service (USFWS), and …

Bridging The Gap In Science Research: Preparing Students For College- Level Research In The Sciences, Victoria Helwig, Yaoguang Li

UConn Library Presentations

Many first-year students enter college unprepared to fully engage with scientific literature and academic library resources. Drawing on experiences from academic librarians working with STEM students, this session explores common gaps in science research skills, including navigating databases, identifying scholarly sources, and understanding the structure of scientific literature. Participants will be introduced to practical strategies and classroom-ready activities to better prepare students for college-level research. Discussion questions: What science research skills do students struggle with most when entering college? How can high school instruction better support these skills? Where can librarians and educators collaborate to support student success?