Animal Sciences Commons^™

A Mechanistic Examination Of Interspecific Competition Between Wild And Domestic Herbivores, Courtney Check

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Large herbivores, such as mule deer and cattle have similar life histories and likely compete for resources. However, quantifying the extent to which these species compete and the specific resources they compete for has proved challenging. My research examines if cattle influence deer abundance and behavior due to competition for forage, competition for shade, and/or by affecting the predation risk of deer. Using a grid of autonomous trail cameras, I was able to determine if cattle abundance influences local deer abundance in relation to specific resources and habitat features. Using GPS data from collared deer, I was also able to …

Treatment Of Yellow Fever Virus With The Ns4b Inhibitor Bdaa And Effects On Rna‐Sensing Innate Immune Pathways In Hamster And Mouse Models, Abbie E. Weight

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Yellow fever (YF) is an acute and often severe disease cause by yellow fever virus (YFV). Although there is an effective vaccine available to prevent YF, there are no antiviral drugs approved to treat the disease, which has a considerable disease burden in endemic areas of South America and Africa. BDAA is an experimental antiviral treatment which has shown efficacy against YFV both in cell culture and when administered before infection in an animal model of disease. BDAA targets the YFV protein NS4B and has two reported mechanisms of action: the primary mechanism of action is the direct inhibition of …

Leveraging Eco-Evolutionary Models For Gene Drive Risk Assessment, Matthew A. Combs, Andrew J. Golnar, Justin M. Overcash, Alun L. Lloyd, Keith R. Hayes, David A. O'Brochta, Kim M. Pepin

USDA Wildlife Services: Staff Publications

Engineered gene drives create potential for both widespread benefits and irreversible harms to ecosystems. CRISPR-based systems of allelic conversion have rapidly accelerated gene drive research across diverse taxa, putting field trials and their necessary risk assessments on the horizon. Dynamic processbased models provide flexible quantitative platforms to predict gene drive outcomes in the context of system-specific ecological and evolutionary features. Here, we synthesize gene drive dynamic modeling studies to highlight research trends, knowledge gaps, and emergent principles, organized around their genetic, demographic, spatial, environmental, and implementation features. We identify the phenomena that most significantly influence model predictions, discuss limitations of …

Evaluation Of Heat Stress And Dietary Amino Acid Density On Nutrient And Energy Partitioning In Broilers, Jean-Remi Teyssier

Graduate Theses and Dissertations

The simultaneous increase in the global demand for animal-based protein products and the rise in temperature associated with global warming pose important challenges to the poultry industry. Heat stress (HS) occurs when an animal’s heat production (HP) surpasses its capacity to dissipate heat into the surrounding environment, ultimately leading to reduced feed intake (FI) and negative impacts on performance. A better understanding of bird responses to elevated temperatures is required to propose effective nutritional strategies that mitigate the adverse effects of HS. Therefore, this dissertation aimed to characterize the nutritional and physiological mechanisms explaining the loss in performance and carcass …

Investigation Of Consumer Freezing Practices, Condition And Duration On Palatability Of Beef, Elizabeth Sue Neal

Graduate Theses and Dissertations

The objective of these studies was to determine: the impact of extended periods of frozen storage duration and packaging type on palatability traits of cooked beef steaks from two muscles and the impact of freezing type and storage duration on objective and subjective measures of ground beef palatability traits. In study 1, no differences were elicited from any of the possible interactions (P= 0.95) for SSF or CL: package × muscle × freezing duration, package × muscle, package × duration or muscle × duration. However, freezing duration did impact both SSF (P < 0.01) and CL (P < 0.001). Generally, for both SSF and CL steaks that were frozen for 9-months elicited both the highest SSF values as well as the greatest percentage of CL among all treatments. In comparison, EM was impacted by the interaction (P = 0.059) of packaging type  muscle  freezing duration. Samples from OW GM stored for 9-months elicited the highest percentage of EM while fresh OW LL samples resulted in the lowest. Additionally, expressible moisture was impacted by the interaction (P = 0.047) of muscle  freezing duration. Among all treatments, GM steaks that were frozen for 9-months elicited the highest EM values and fresh LL samples the lowest EM values. Contrastingly, there was no significant difference observed in expressible moisture for the interaction (P  0.18) of package type  freezing duration or for the interaction (P = 0.70) of package type  muscle. Generally, fresh OW GM steaks resulted in the greatest concentration of lipid derived volatile compounds such as aldehydes, hydrocarbons and alcohols which contrasted sensory ratings of trained panelists that indicated oxidized and refrigerator-stale ratings increased as storage time increased for OW steaks. In study 2, The interaction of freezer treatment × storage duration impacted gumminess (P = 0.05), a TPA attribute. In greater detail, samples stored in RF for 6-months resulted in the greatest gumminess values (P < 0.001), while those stored in the CF for 12-months elicited the lowest (P < 0.001). Similarly, flavor development was also impacted by the interaction (P = 0.05) of freezer treatment × storage duration. Three lipid derived compounds were of greatest concentration among RF patties stored for 1-month. In contrast, the interaction of freezer treatment × storage duration elicited no impact on consumer ratings, SF or TBARS. Nonetheless, frozen storage duration impacted TPA, flavor development, consumer ratings, SF and TBARS as a main effect (P < 0.05), especially in regard to tenderness and juiciness. Moreover, beef flavor development, tenderness and juiciness are impacted by freezing duration, muscle, freezer type and packaging, however these factors are not necessarily independent of one another. Furthermore, the retail display period is a critical period for fresh beef steaks, especially when packaged in aerobic conditions. For optimal eating experience, beef products should be stored for extended periods in a vacuum packaging, in a designated freezer that is not opened frequently to allow for optimal air flow regulation and minimize freezer burn to improve tenderness and juiciness.

New Species Of Dryolestoid From The Late Cretaceous Allen Formation And Implications For South American Faunal Diversity., Brigid Erin Connelly

Electronic Theses and Dissertations

Dryolestoids are extinct cladotherians mammals from the Jurassic and Cretaceous periods. I describe a collection of dryolestoid specimens from the Late Cretaceous localities of Cerro Tortuga (Allen Formation), Anfiteatro 1, and Shining (both La Colonia Formation) from Patagonia, Argentina. Using comparative morphology, I identify a new species of meridiolestidan dryolestoid based on eleven specimens across both formations. The new species’ recovery from La Colonia Formation represents the first dryolestoid connection between the two approximately contemporaneous formations. The species’ morphology may represent an ecological shift within Meridiolestida from insectivory to herbivory, showing a transition in characters between the plesiomorphic sharp-toothed meridiolestidans …

Identification And Assessment Of Lameness In Sows Through The Utilization Of Nutrack And Gaitfour Systems, Lexi M. Ostrand

Department of Animal Science: Dissertations, Theses, and Student Research

Lameness is a financial concern for producers and a welfare concern for the animals. Utilizing both the GAITFour and NUtrack systems, gilts’ natural tendencies and gait were analyzed to better understand the onset of lameness and what indicators can be identified in a commercial setting. Beginning at 20 weeks of age, video on replacement gilts was collected for 9 consecutive days and processed using the NUtrack System to identify individual gilts’ distance travelled (m), avg speed (m/s), angle rotated (degrees), and time standing (s), sitting (s), eating (s), and laying (s). NUtrack is a deep learning-based multi-object …

Consequences Of Cow-Calf Production With Limited Perennial Forage Grazing, Hannah Speer

Department of Animal Science: Dissertations, Theses, and Student Research

Conversion of perennial grasslands to cropland and rising land prices prompts a need to evaluate alternative beef cow-calf production systems. A 3-yr study was conducted comparing beef cow-calf performance between two August-calving cow systems: perennial forage and corn residue grazing; or summer drylot, fall grazing of late-summer-planted cover crop, and corn residue grazing. Cow body condition score differed between systems, but condition of cows in both systems never fell below adequate. There were no differences in pregnancy rates between systems. Calf weaning weights differed between systems each year; differences are attributed to feedstuff quantity, quality, and type available to calves …

Effect Of Authentic Kefir And Nigella Sativa On Broilers Challenged By Coccidia And Clostridium Perfringens, Julian E. Nixon

All Dissertations

Black seed oil concentrations of 0%, 0.1%, 1% and 5% were added to milk inoculated with kefir grains and incubated at 25°C for 22 h. The pH and microbial count indicated 1% black seed oil caused low inhibition (P > 0.05) of fermentation, but 5% black seed oil caused significant inhibition of the kefir microorganisms (P < 0.05).

Cobb 500 male chicks (n = 256) were distributed in a randomized block design and received one of four treatments: CTRL1 (Non-medicated, no kefir, no Clostridium perfringens), CTRL2 (Non-medicated, no kefir, C. perfringens inoculated), CTRL3 (BMD medicated, no kefir, C. perfringens inoculated), KTRT (Non-medicated, …

Evaluation Of Bone And Muscle Quality In Laying Hens Using Quantitative, Radiographic, Computed Tomographic, Biomechanical, And Tissue Level Measures, Cerano Harrison

All Dissertations

Bone quality is an important measure of welfare in laying hens for researchers, veterinarians, and commercial producers who bear the responsibility of providing them with care. Breeding practices that have resulted in high egg productivity of laying hen strains have resulted in an increased susceptibility to developing osteoporosis. Osteoporosis, a decrease in mineralized bone, is accompanied by increased bone fragility that can lead to potentially painful bone fractures that can inhibit some aspects of the birds natural living, respiration and flight being two examples. Current methods of examining laying hen bone quality involve the implementation of diagnostic imaging and biomechanical …

Informing Management Strategy For The Relict Leopard Frog (Rana Onca): Insights Into Breeding Biology And An Attempt To Improve Augmentation Success Through Pre-Exposure And Clearance Of An Emerging Amphibian Pathogen, Rebeca Rivera

UNLV Theses, Dissertations, Professional Papers, and Capstones

The Relict Leopard Frog, Rana onca, is a species of conservation concern that suffered a decline sometime during the 20th century. Even after two decades of intensive management, the species currently only occupies 20 spring sites in southern Nevada and northwestern Arizona. The causes for the historical decline are mostly speculative, but relate to habitat loss, introduced predators, and emergent disease. Since 2001, R. onca has been under an intensive conservationprogram managed by a multiagency conservation team. There are several objectives specified in the program including the need to investigate the biology of the species and incorporate findings into …

The Effects Of Caffeine On Activity Levels And Motor Behaviors In The Honeybee, Apis Mellifera, Johana Castro

Theses and Dissertations

Caffeine is produced by plants as a defense mechanism against herbivores and pathogens. However, caffeine was found in floral nectar, which contradicts nectar's role in attracting pollinators. Interestingly, low concentrations of caffeine were shown to increase alertness and locomotion in mammals and invertebrates, indicating it may enhance the productivity of pollinators. This investigation examined how caffeine affects activity levels and motor behaviors in the honey bee, Apis mellifera. To test overall activity, forager bees were collected and fed 1 M sucrose to satiation. The following day, bees received 10 µl of 1.0 M sucrose alone or with caffeine ranging from …

Developing A Predictive Geospatial Habitat Model For A Rare Species Of Salamander In Tennessee: A Case Study For The Green Salamander (Aneides Aeneus), Erin Gaylord

Masters Theses and Doctoral Dissertations

Green Salamanders (Aneides aeneus; Cope and Packard 1881) are a secretive and cryptic species of salamander that can be relatively difficult to detect, due to their occupation of arboreal habitats. The incorporation of geospatial tools is critical in developing models that can be used to predict undocumented locations in Tennessee and elsewhere. Locating the species in Tennessee was accomplished through a total of 18 localities and with that, several habitat characteristics were able to be identified including, but not limited to: appropriately shaded and structured rocks, typical fauna co-occurring within the area, and general topography of the area. Of the …

Recreational Fishing Identification Guide, Department Of Primary Industries And Regional Development, Western Australia

Fisheries occasional publications

This guide has been developed to help you identify the more common species in Western Australia that you may encounter. The purpose of this guide is to enhance consistent and accurate species identification. If you are unsure about a particular species (or if it is not in this guide), please discuss it with a representative of the Department of Primary Industries and Regional Development, Western Australia.

Throughout this guide you will see all or some of the marine bioregion symbols with each fish illustration, indicating where the species is most likely to occur.

Updated August 2023.

Multispecies Genomic Sex Identification Using Ddx3 Gene Polymorphisms, Jessica Felts

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

PCR sex determination assays must be reliable and cost effective due to the frequent and integral use of these assays in biological research and the animal production industry. Thus, the design of proof of a primer pair with a built-in control is warranted to not only bypass the extra cost of a multiplex reaction, but also to prevent anomalous results that have been documented with other primer pairs.

The objective of this study was to design primer pairs with built in PCR amplification control to identify sex in Equus caballus (domestic horse), Homo sapiens (humans), Macaca mulatta (rhesus macaque), and …

Anthropogenic Factors Affecting Common Raven Occurrence And Depredation Of Artificial Nests Within Greater Sage‐Grouse Habitat In Southern Utah, Zoë S. Moffett

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Certain species of wildlife are more generalist and adaptive than others. These species often flourish when supported by human activities that provide additional food and habitat for them. The common raven (Corvus corax; hereafter raven) is one such species; their populations have risen and spread throughout the Intermountain West. As generalist scavengers and predators, ravens have been found to pose a severe threat to several threatened or sensitive species, including the greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse). The purpose of my research was to determine the specific anthropogenic and habitat factors that may increase the threat …

An Ecological Survey Of East Texas Salamanders Across The Camp Tyler Outdoor Field School In Smith County, Texas, Justin C. Hunt

Biology Theses

Amphibians are a unique class of organisms with a very long and storied evolutionary history of survival. Many modern amphibian clades occupy several vital ecological roles within their native freshwater environments. One of these roles, typically includes functioning as an ecological indicator species, whereby the presence of stable and diverse populations of many amphibian species, including salamanders, within a freshwater ecosystem have long been considered ecological indicators of good habitat quality and stable ecosystem health. Similarly, salamanders also function as important members of their local food webs and act as valuable mediators of complex trophic hierarchies to facilitate nutrient cycling …

Commercial Fishing Identification Guide 2023, Department Of Primary Industries And Regional Development, Western Australia

Fisheries occasional publications

Throughout this guide you will see all or some of the marine bioregion symbols with each fish illustration, indicating where the species is most likely to occur.

This guide has been developed to help you identify the more common species in Western Australia you may encounter. The purpose of this guide is to enhance consistent and accurate species identification.

If you are unsure about a particular species (or if it is not in this guide), please discuss it with a representative of the Department of Primary Industries and Regional Development, Western Australia.

Impact Of Distillers Removal And Impact Of Lowering Inclusions Of Distillers Grains Plus Solubles And Different Roughage Quality On Finishing Cattle Performance, Sofia Suarez Lorences

Department of Animal Science: Dissertations, Theses, and Student Research

A feedlot trial (Exp. 1) was conducted to evaluate the impact of removing modified distillers grains plus solubles (MDGS) on performance and carcass characteristics. Cattle with MDGS removed on either d 79 or d 43 had reduced final BW, DMI, and ADG. Cattle with MDGS removed on d 43 were 5% less efficient than cattle fed 20% MDGS throughout the entire 124-d feeding period. Cattle fed 20% MDGS throughout the whole feeding had the greatest HCW and LM area. There were no differences in backfat and marbling scores among treatments, and no differences in percent of abscessed livers. In conclusion, …

Mid-Gestation Maternofetal Inflammation Impacts Growth, Skeletal Muscle Glucose Metabolism, And Inflammatory Tone In The Ovine Fetus During Late Gestation, Zena Hicks

Department of Animal Science: Dissertations, Theses, and Student Research

Our 1^st and 2^nd studies assessed the impact of mid-gestation maternofetal inflammation on growth, skeletal muscle glucose metabolism, and inflammatory tone in the late gestation ovine fetus. The objective was to determine if inducing maternofetal inflammation during peak placental growth would lead to more profound IUGR characteristics in the fetus. MI-IUGR fetuses exhibited reduced body and skeletal muscle weights and hallmark asymmetric growth at late gestations. Fetuses had higher baseline glucose:insulin ratios and reduced glucose-stimulated insulin secretion. Moreover, hindlimb glucose oxidation was impaired independent of glucose uptake. Skeletal muscle specific glucose uptake and oxidation was reduced in MI-IUGR …

Babesa Sewage Treatment Plant As A Vital Artificial Wetland Habitat For A Multitude Of Avian Species, Pelden Nima, Mahendra Timsina, Tenzin Jamtsho, Pema Khandu

Research outputs 2022 to 2026

This study aimed to glean basic ecological aspects on diversity and abundance, temporal variation and guild composition of the birds at Babesa Sewage Treatment Plant (STP). The line transect method was used as the sampling technique from November 2021 to October 2022. A total of 80 species belonging to 58 genera, 29 families, and 11 orders were detected, of which three, namely, River Lapwing Vanellus duvaucelii, Falcated Duck Mareca falcata, and Ferruginous Duck Aythya nyroca, are ‘Near Threatened’ with the remaining being ‘Least Concern’. The highest species richness was recorded in the winter (6.29), the highest species diversity in the …

2023 Coordinated Spring Survey Of Mid-Continent Sandhill Cranes, Terry Liddick

United States Fish and Wildlife: Staff Publications

The aerial transect portion of the coordinated spring survey of mid-continent Sandhill cranes was conducted on March 22, 2023 in Nebraska’s Central Platte and North Platte River valleys (United States). The 2023 photo-corrected aerial estimate is 1,259,000 birds. Outside the traditional aerial transect portion, observers conducted ground surveys during the period March 20–22. From these regions, observers in the Official Survey Area (OSA) of Nebraska, Kansas, Texas, Oklahoma, and Wyoming reported an additional 25,363 cranes. The 2023 total estimate (1,284,500) increased 43.1% from 2022. The current three-year average (2021–2023 with no photo correction in 2021), based on photo corrected estimates …

Combining Host And Rumen Metagenome Profiling For Selection In Sheep: Prediction Of Methane, Feed Efficiency, Production, And Health Traits, Melanie K. Hess, Larissa Zetouni, Andrew S. Hess, Juliana Budel, Ken G. Dodds, Hannah M. Henry, Rudiger Brauning, Alan F. Mcculloch, Sharon M. Hickey, Patricia L. Johnson, Sara Elmes, Janine Wing, Brooke Bryson, Kevin Knowler, Dianne Hyndman, Hayley Baird, Kathryn M. Mcrae, Arjan Jonker, Peter H. Janssen, John C. Mcewan, Suzanne J. Rowe

Department of Animal Science: Faculty Publications

Background Rumen microbes break down complex dietary carbohydrates into energy sources for the host and are increasingly shown to be a key aspect of animal performance. Host genotypes can be combined with microbial DNA sequencing to predict performance traits or traits related to environmental impact, such as enteric methane emissions. Metagenome profiles were generated from 3139 rumen samples, collected from 1200 dual purpose ewes, using restriction enzyme-reduced representation sequencing (RE-RRS). Phenotypes were available for methane (CH4) and carbon dioxide (CO2) emissions, the ratio of CH4 to CH4 plus CO2 (CH4Ratio), feed efficiency (residual feed intake: RFI), liveweight at the time …

Waterbody Size Predicts Bank- And Boat-Angler Efforts, Derek S. Kane, Kevin L. Pope, Keith D. Koupal, Mark A. Pegg, Christopher J. Chizinski, Mark A. Kaemingk

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Bank- and boat-angler efforts are logistically difficult and costly to estimate, preventing landscape-scale estimates that are required to address current and future challenges (e.g., climate change, invasive species) for inland recreational fisheries. Using a large Nebraska, USA, recreational fishery dataset (N = 67 waterbodies), we demonstrate that waterbody size can be used to predict bank- and boat-angler efforts across a heterogeneous landscape of extra small (< 104 ha) and large (> 647 ha) waterbodies. Bank and boat anglers respond to waterbody size, however these relationships appear to be unique between the two angler types. Boat-angler efforts increased as a function of waterbody size, whereas bank-angler …

Effect Of Supplementation Prior To Artificial Insemination And During Gestation In Beef Females, Landon Tadich

Department of Animal Science: Dissertations, Theses, and Student Research

Objectives of Experiment 1 was to evaluate the impact of increased energy prior to AI on BW, ADG, and reproductive efficiency in heifers developed on range or in a dry lot. During the winter development period (131 ± 3.5 d/yr) heifers (n= 100/yr) were assigned to either upland range (RANGE) or fed a dry lot diet in two pens that either remained constant (DLLO) or increased in energy prior to AI (DLHI). Heifers developed on RANGE grazed upland winter range until 38 d prior to AI where they then received the DLLO diet. Pre-breeding BW was greater (P £ …

Parents’ Perceptions Of The Philly Goat Project’S All Abilities Ramble: A Qualitative Study Of Animal-Assisted Intervention For Intellectual And Developmental Disorders, Patricia Flaherty-Fischette, Jenée Lee, Yvonne D'Uva-Howard, Elizabeth P. Cramer, Karen Krivit, Sarah Meehan

Developmental Disabilities Network Journal

Individuals with intellectual and developmental disabilities (IDD) are a growing population. Considering the wide diversity in IDD and the financial burden of traditional treatment modalities, Animal-Assisted Interventions (AAI) has emerged as an innovative and non-traditional treatment for individuals with a range of disabilities, including individuals with IDD. To the authors’ knowledge, the present study was one of the first to explore a goat-assisted therapy experience for children with IDD. This study explored the experiences of 23 children with the All Abilities RAMble – a goat-assisted therapeutic activity offered by the Philly Goat Project (PGP). Key themes in our study included …

Design And Redesign Of A Bottom Trawl Survey In Chesapeake Bay, Usa, Robert J. Latour, James Gartland, Christopher F. Bonzek

VIMS Articles

Fisheries-independent surveys that reliably sample a broad size range of exploited and ecologically important species provide valuable data in support of fisheries management and ecosystem science. The operational consistency of surveys over time and space is fundamental to the interpretation of data in the contexts of population dynamics processes, community interactions, policy impacts, and environmental forcing. However, the need to maintain historic sampling protocols over extended time periods limits the utilization of new technologies that could lead to improved data collection. Survey vessel replacements also become inevitable as the maturity of sampling programs becomes multidecadal. This case study describes the …

Evaluating Vaccine Management Strategies For Edwardsiella Ictaluri Infections In Zebrafish (Danio Rerio), Brandy Malbrough

LSU Master's Theses

Aquaculture is a globally important industry that faces significant challenges due to infectious diseases, which can result in substantial financial losses. In 2011, a new strain of Edwardsiella ictaluri emerged as a major pathogen affecting zebrafish in the ornamental fish industry, leading to high mortality rates and posing a severe threat to the sector. Vaccines provide potential benefits for disease prevention in aquaculture, particularly live-attenuated vaccines (LAVs), which induce strong host immune responses. Bacterial attenuation for vaccine development has evolved from serial passage to more targeted genetic modification techniques. However, regulatory constraints limit the availability of licensed LAVs for aquaculture. …

Two New Species Of The Remarkable Scorpion Genus Megacormus Karsch, 1881 (Scorpiones: Euscorpiidae), Rolando Teruel, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Two new species of the very interesting euscorpiid scorpion genus Megacormus Karsch, 1881, are herein described from eastern Mexico. Both had been previously misidentified in the published literature, one as Megacormus segmentatus Pocock, 1900, the other as Megacormus granosus (Gervais, 1844), but the direct comparison of adults of both sexes to adult topotypes from all members of the genus currently accepted as valid taxa, revealed solid morphological characters that warrant their recognition as distinct taxa. Both new species seem also to be endemics with a small distribution area, but apparently not restricted to a single locality. This addition raises the …

Holocene Rice Rats (Genus Oryzomys) From The Upper Mississippi River Drainage Basin, Hugh H. Genoways

Zea E-Books Collection

The expansion and collapse of the geographic range of the Texas rice rat (Oryzomys texensis) in the upper Mississippi River drainage basin at the end of the Holocene was a unique event in North American mammals. In a period of about 4000 years with a point of origin near the American Bottom in Illinois, these small rodents extended their geographic range in a straight-line distance of over 950 km to the west into Nebraska and the same distance to the east into Pennsylvania. Then in less than 400 years this range expansion collapsed back to a point where …