Animal Sciences Commons^™

Time Series Forecast Analysis In Wholesale Broiler Markets, Christopher R. Sims

Graduate Theses and Dissertations

In 2016 the chicken industry provided nearly 1.2 million jobs, 68 billion dollars in wages, 313 billion dollars in economic activity and 24 billion dollars in government revenue (John Dunham & Associates, Inc., 2016). Broiler production has changed dramatically from the early 90’s to the turn of the 21st century. Technological advancements, continuous improvements, production efficiencies and industry changes have made the industry the global market it is today. The poultry industry is an extremely volatile market with prices constantly fluctuating in response to input price volatility and demand and supply changes. These changes are often driven by world economic …

Evaluating Social Network Dynamics Of Bigg’S Killer Whales (Orcinus Orca) And Vessel Traffic Within A Transboundary Region: Implications For Conservation Management, Courtney Smith

Dissertations

The social lives of animals are defined by group dynamics based on the nature and strength of associations and movements between individuals, often resulting in highly complex and interconnected social networks. However, understanding of how environmental variables may shape this structure is poorly understood. Within the inland waters of Washington State and southern Vancouver Island, British Columbia, mammal-eating Bigg’s (transient) killer whales occur in relatively small, but stable social groups. Group size and occurrence in recent years has increased, coinciding with a growing whale watching industry. Given the central importance of the social network within killer whale population dynamics, such …

Escorting Of Mother-Calf Pairs Of Humpback Whales (Megaptera Novaeangliae) In The Colombian Pacific During The Breeding Season, Natalia Botero Acosta

Dissertations

Humpback whales (Megaptera novaeangliae) belonging to the “breeding G-stock” annually migrate from the Antarctic Peninsula and southern Chile to the southeastern Pacific to reproduce. Associations between mother-calf pairs and escorts were examined in the Gulf of Tribugá, northern Colombian Pacific, using photo-identification and behavioral/spatial sampling. Research hypotheses included: 1. The association between cows and escorts is short-lived, consistent with a male reproductive strategy, 2. The presence of escort(s) elicits a behavioral response from mother-calf pairs and, 3. The patterns of spatial distribution reflect the spatial segregation of maternal females. Groups were classified as mother-calf pairs (Mc), mother, calf …

Genetic Diversity Of Kemp's Ridley (Lepidochelys Kempii) Sea Turtles On South Padre Island, Texas, Hilary R. Frandsen

Theses and Dissertations

In 2010, researchers observed an abrupt decline in nesting numbers of the Kemp’s ridley following 35 years of positive growth. In wake of this halt, and subsequent lowered nesting averages, evaluation of the genetic diversity of remaining individuals is relevant to investigate the plausibility of a genetic bottleneck, and determine the reproductive stability of the Kemp’s ridley.

Here, I evaluate the genetic diversity within a sampling of the Kemp’s ridleys on South Padre Island using two methods: targeting the mitochondrial control region and targeting the complete mitochondrial genome. Opportunistic samples were donated from juvenile ridleys on the East coast, and …

Reduction Of Escherichia Coli Surrogates For Shiga Toxin-Producing Escherichia Coli On Beef Cuts By Dipping In Lactic Or Peroxyacetic Acid For Short Or Extended Times And The Effect On Ground Beef Quality, Ashley Rae Mccoy

Department of Animal Science: Dissertations, Theses, and Student Research

Shiga Toxin-producing Escherichia coli (STEC) are adulterants in ground beef. Antimicrobial interventions reduce STEC, but effectiveness may depend on application time and the impact on ground beef quality.

Objectives were to evaluate reductions in rifampicin-resistant E. coli (E. coli^RIF) on beef clod surfaces, and the effect on ground beef quality. Beef clods were sectioned and dipped in 4.5% lactic acid (LA) or 380 ppm peroxyacetic acid (PA) for 15 or 180 s. E. coli^RIF were inoculated (~5.3 log CFU/cm2) onto fat or lean tissue surfaces. Non- inoculated treatments were ground into ~454 g …

Management Strategies For Beef Heifer Development, Shelby Ann Springman

Department of Animal Science: Dissertations, Theses, and Student Research

Four experiments were conducted to determine the impact of development systems, trace mineral source, and trace mineral supplementation on beef heifers. Experiment 1 utilized 300 Angus-based, spring-born heifers to evaluate postweaning heifer development systems on gain, reproductive performance, and feed efficiency as a pregnant heifer. Heifers were blocked by BW and randomly assigned to graze corn residue, upland range, or were fed 1 of 2 diets in a drylot differing in energy levels: high or low. Heifer development system did not impact AI or final pregnancy rates. Development cost per pregnant heifer was not different among treatments. Furthermore, pregnant heifer …

Methane From Lactating Dairy Cattle: Studies For Mitigation, Diurnal Variation, And Role In Energy Metabolism, Jared Vern Judy

Department of Animal Science: Dissertations, Theses, and Student Research

Reducing methane production in dairy cattle has received an increased interest due to environmental concerns associated with its potency as a greenhouse gas. Methane represents lost energy in cattle and reduction may increase animal efficiency and productivity. Experiment 1 evaluated strategies of mitigating methane production in lactating dairy cattle with inclusion of dried distillers grains and solubles (DDGS), DDGS with added corn oil, and DDGS with added calcium sulfate and effects on energy and nitrogen balance. Inclusion of DDGS, corn oil, and calcium sulfate, increased DMI and milk yield. Methane production was reduced with addition of corn oil …

Evaluation Of Corn Condensed Distillers Solubles In Beef Cattle Diets And Grazing Double-Cropped Forages Following Corn Harvest, Benjamin H. Hansen

Department of Animal Science: Dissertations, Theses, and Student Research

Corn condensed distillers solubles (CDS) is a protein and energy dense by-product from dry-milled production of ethanol. Recent oil extraction has posed modifications to the nutrient profile of CDS, suggesting that de-oiled CDS needs to be re-evaluated in beef cattle diets. Three experiments were conducted to evaluate the effects of CDS in high-concentrate diets, forage-based diets, as well as evaluate the effects of CDS on diet digestibility and rumen fermentation parameters in forage-based diets. Feeding CDS in high-concentrate diets up to 20% of the diet DM or in combination with wet distillers grains plus solubles (WDGS) improved performance and resulted …

Impact Assessment Of Push-Pull Pest Management On Incomes, Productivity And Poverty Among Smallholder Households In Eastern Uganda, Ruth T. Chepchirchir, Ibrahim Macharia, Alice W. Murage, Charles A.O. Midega, Zeyaur R. Khan

All Peer-Reviewed Publications

The paper evaluates the impact of adoption of push-pull technology (PPT) on household welfare in terms of productivity, incomes and poverty status measured through per-capita food consumption in eastern Uganda. Push-pull is a habitat management strategy for the integrated management of stemborers, striga weeds and poor soil fertility involving the use of a natural repellent (push) and an attractant (pull). This biological technology simultaneously reduces the impact of three major production constraints to cereal-livestock farming in Africa − pests, weeds and poor soil. Cross sectional survey data were collected from 560 households in four districts in the region (Busia, Tororo, …

The Development Of A Specific Pathogen Free (Spf) Barrier Colony Of Marmosets (Callithrix Jacchus) For Aging Research, Corinna N. Ross, Steven Austad, Kathy Brasky, Celeste J. Brown, Larry J. Forney, Jonathan A. Gelfond, Robert Lanford, Arlan Richardson, Suzette D. Tardif

Biology Faculty Publications (Archived)

A specific pathogen free (SPF) barrier colony of breeding marmosets (Callithrix jacchus) was established at the Barshop Institute for Longevity and Aging Studies. Rodent and other animal models maintained as SPF barrier colonies have demonstrated improved health and lengthened lifespans enhancing the quality and repeatability of aging research. The marmosets were screened for two viruses and several bacterial pathogens prior to establishing the new SPF colony. Twelve founding animals successfully established a breeding colony with increased reproductive success, improved health parameters, and increased median lifespan when compared to a conventionally housed, open colony. The improved health and longevity of marmosets …

Understanding And Finding Solutions To The Problem Of Sedimentation In The National Wildlife Refuge System, Max Post Van Der Burg, Karen E. Jenni, Timothy L. Nieman, Josh D. Eash, Gregory A. Knutsen

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

The National Wildlife Refuge System (Refuge System) is a collection of public lands maintained by the U.S. Fish and Wildlife Service for migratory birds and other wildlife. Wetlands on individual National Wildlife Refuges (Refuges) may be at risk of increased sedimentation because of land use and water management practices. Increased sedimentation can reduce wetland habitat quality by altering hydrologic function, degrading water quality, and inhibiting growth of vegetation and invertebrates. On Refuges negatively affected by increased sedimentation, managers have to address complex questions about how to best remediate and mitigate the negative effects. The best way to account for these …

A Comparative Life Cycle Assessment Of Nutritionally Equivalent Meals With And Without Pork, Kelli Young

Graduate Theses and Dissertations

The following report details a life cycle assessment of several dietary and meal scenarios with and without pork. The goal of the LCA was to identify the impacts of greenhouse gas emissions, water use, and land use of pork containing and porkless diets and meal plans in a field-to-fork analysis. The dietary and meal plan scenarios are iso-caloric meaning they contain the same number of calories. The first set of diets is based on a USDA consumption pattern, 2000 kcal per day. This diet was used to create three other dietary scenarios with and without pork. The USDA recommended food …

Effect Of Endophyte-Infected Tall Fescue Toxins On Growth Performance And The Microbial Community In The Rumen And Feces In Pregnant Ewes, Saleh Alrashedi

Graduate Theses and Dissertations

Fifty pregnant Katahdin ewes grazed pastures with high (HE) and moderate (MI) levels of Neotyphodium coenophialum-infected tall fescue between February 1 and May 24 to determine the impacts of tall fescue toxins on body weight (BW), body condition scores, FAMACHA scores, fecal egg counts (FEC), and serum Cu, Zn, prolactin, and non-esterified fatty acids (NEFA). Within those 50 ewes, 15 were selected randomly for fecal and rumen sampling to assess the impacts of HE and MI on the microbiome community. Total bacterial DNA was extracted from rumen and fecal samples, and alpha and beta diversities were used to relate microbiome …

Morganella Morganii (Enterobacteriales: Enterobacteriaceae) Is A Lethal Pathogen Of Mexican Fruit Fly (Diptera: Tephritidae) Larvae, Bacilio Salas, Hugh E. Conway, Erin Schuenzel, Kristen Hopperstad, Christopher Vitek, Don C. Vacek

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Tephritid pests, such as the Mexican fruit fly, Anastrepha ludens (Loew), represent a major threat to fruit production worldwide. In order to control these pests, sterile insect technique is used to suppress and eradicate wild populations. For this control method to be successful, hundreds of millions of flies must be produced weekly in mass rearing facilities. The large quantity of artificial diet and close proximity of flies at various life stages allows bacteria from family Enterobacteriaceae, Bacillaceae, Pseudomonadaceae, and others to multiply and spread more easily. In this study, bacteria with a possible pathogenic effect were isolated from Mexican fruit …

Utilizing Accelerometer Telemetry Tags To Compare Red Snapper (Lutjanus Campechanus) Behavior On Artificial And Natural Reefs, Ethan T. Getz

Theses and Dissertations

The Texas Parks and Wildlife Department Artificial Reef Program has deployed over 2,800 hectares of reefing area composed of petroleum platforms, steel vessels, and concrete. Artificial reefs have been shown to support many important reef fishes such as red snapper (Lutjanus campechanus), however, few studies have compared fish behavior on artificial reefs and natural habitats. We examined activity levels, behavioral patterns and habitat preferences of red snapper over natural reefs, oil platforms and submerged ships. Telemetry tags (Sonotronics model MTT) with tri-axial acceleration range, average depth, and average temperature were programmed to optimize data collection and tag life. …

Effect Of Land Use Change On South Texas Bats, Katharine Leigh Jones

Theses and Dissertations

Bats were acoustically recorded in South Texas over the summer of 2017. Nine species of bats were recorded and identified.

The Spatial Ecology And Microhabitat Selection Of The Pygmy Rattlesnake (Sistrurus Miliarius) In Southwestern Missouri, Dylan Wallace Maag

Graduate Theses/Dissertations

Despite a wide distribution throughout the southeastern United States, pygmy rattlesnakes (Sistrurus miliarius) have received less research attention than many other rattlesnake species. I captured a total of 33 S. miliarius at the Drury-Mincy Conservation Area (DMCA) and retained 14 large individuals (mostly gravid females) for a radio telemetry study. Snakes were primarily captured during evening road driving surveys and were encountered rarely with any other sampling technique. Sistrurus miliarius are widespread at DMCA where they were encountered in forest, savanna, and glade habitats. Snakes selected microhabitats with more vegetative cover and tree canopy closure than random sites …

The Effect Of Weight Carried And Time Ridden On Back Pain In Horses Ridden During Horse Shows As Determined By Pressure Algometry, Meghan Louise Mothershead

Graduate Theses/Dissertations

The objective of this study was to determine the effects of weight carried (rider + tack) on back pain in horses used in riding classes and a series of intercollegiate horse shows. Sixteen school horses (431-649 kg) were ridden consistently over a semester. Cross sectional images were used to measure width and put in a mapping program to figure total area. Back pain scores were determined using a pressure algometer on predetermined points over the horses back. Pain scores were recorded over five periods, including 28 d into the semester (P1) and during the show period on three consecutive Fridays …

Genomic Data Reveal A Loss Of Diversity In Two Species Of Tuco-Tucos (Genus Ctenomys) Following A Volcanic Eruption, Jeremy L. Hsu, Jeremy Chase Crawford, Mauro N. Tammone, Uma Ramakrishnan, Eileen A. Lacey, Elizabeth A. Hadly

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Marked reductions in population size can trigger corresponding declines in genetic variation. Understanding the precise genetic consequences of such reductions, however, is often challenging due to the absence of robust pre- and post-reduction datasets. Here, we use heterochronous genomic data from samples obtained before and immediately after the 2011 eruption of the Puyehue-Cordón Caulle volcanic complex in Patagonia to explore the genetic impacts of this event on two parapatric species of rodents, the colonial tuco-tuco (Ctenomys sociabilis) and the Patagonian tuco-tuco (C. haigi). Previous analyses using microsatellites revealed no post-eruption changes in genetic variation in C. …

The Mental Homologies Of Mammals. Towards An Understanding Of Another Mammalsworld View, Marthe Kiley-Worthington

Theory of Mind Collection

Mammals’ mental homologies include that they look after their young, suckle and protect them; they acquire information about the world by learning. They have five types of sensory receptors and a brain to analyze the information and they feel: that is they are sentient. Mental homologies have been largely ignored by behavioural scientists since Darwin because of certain historical beliefs. This however has not been the case for people who have had to do with non-human mammals who have long recognized their mental similarities to humans. As a result, behavioural science has sponsored some inappropriate research (examples are given). The …

Evaluating The Impact Of Two Contrasting Tillage Practices On Soil Properties In Central Kentucky, Emily Cook

Posters-at-the-Capitol

Farming practices such as no tillage and plowing can institute change on soil physical and chemical characteristics. In this research, the effects of long-term conventional and no-tillage systems on the selected soil properties were determined in a continuous corn system on a farm with Maury silt loam soil. These samples were taken from University of Kentucky's Research Farm (Spindletop Farm). The field used was tilled in 1969 from bluegrass sod and the first time research was conduced was in 1970. Each plot is 20 ft. by 40 ft. and for many years each plot was split with winter cover crop …

Evaluating The Ecological Status Of The Introduced Nile Monitor (Varanus Niloticus) In Florida: Forecasting Presence And Population Expansion Using Computational Geographic Information Systems, Noah G. Cohen

HCNSO Student Theses and Dissertations

The Nile monitor (Varanus niloticus) is a large, carnivorous lizard that has become a notorious invasive species in Florida, USA. Initially released in the 1980s from the pet trade, the species has since established at least three breeding populations and spread throughout much of southern Florida. While current control efforts have failed to eradicate V. niloticus, it is important to attain a better understanding of its invasive dynamics to guide and inform better control strategies. In this study, available georeferenced records of V. niloticus in Florida were compiled and linked to a habitat classification map to evaluate ecotype preferences. Factored …

Growth And Development Of Two Broiler Strains With Low Protein And Crystalline Amino Acid Supplemented Diets, Chaoyang Li

LSU Master's Theses

The objective of this research was to compare the growth performance of broilers from two commercial breeds with control, low protein and low protein supplemented with crystalline amino acids diets. This was a randomized block design, and identical experiments were conducted on successively in two years. In each experiment, day-old chicks, Ross 708 broilers and Cobb 405 broilers, were randomly assigned into three dietary treatments: 1) positive control, 2) low crude protein (LP), and 3) LP + crystalline amino acids (CAA). A three phase feeding program was used. Feed and water were provided ad-libitum. On d 12, 19, 26, 33, …

A Study Of The Urban Red Fox (Vulpes Vulpes) Population In Baton Rouge, Louisiana Using Social Media, Ahsennur Soysal

LSU Master's Theses

Foxes are timid yet resourceful animals that are integrated into many urban environments. Because they are elusive, collecting information about the number of urban foxes, their diet and spatial distribution, their interactions with the ecological community in their urban habitat, as well as residents’ response to them, is difficult. Involving stakeholders to participate in the data collection on wildlife via citizen science on social media is one way to overcome this complication, while simultaneously engaging residents in the ecology happening around them. Therefore, we used social media as the platform to engage the public to document and map the foxes …

Evaluation Of Reproductive Phenology And Ecology Of Eastern Wild Turkey (Meleagris Gallopavo Silvestris) In South Carolina, Patrick Wightman

LSU Master's Theses

Many southeastern states, including South Carolina, in the last 10 -15 years have seen a decline in Eastern wild turkey (Meleagris gallopavo silvestris) populations. Around 50,000 turkey hunters in South Carolina, result in approximately 35 million annually in revenue. Turkeys encounter a unique situation as environmental variation and hunter activity may impact behaviors as hunting occurs during the reproductive season. Mistimed hunting seasons could result in population declines. Timing of harvest requires managers to implement seasons that allow for hunter satisfaction (hearing gobbles) while ensuring no detriment to turkey populations through impacts to reproduction. To better understand factors influencing gobbling …

The Impact Of Co2-Related Ocean Acidification On The Molecular Regulation Of Shell Development In The Eastern Oyster (Crassostrea Virginica)., Mackenzie L. Richards

LSU Master's Theses

Eastern oysters (Crassostrea virginica), native to the Gulf of Mexico, are keystone species in estuarine ecosystems and are economically valued. Current research indicates that ocean acidification adversely affects the physiology and morphology of larval oysters, but the molecular mechanisms of this impact remain unstudied. Ocean acidification is contributed to by elevated atmospheric CO₂ due to increased anthropogenic activities, causing heightened partial pressure of CO₂ (pCO₂), and eutrophication from land-based runoff in the Gulf. The objective of this work was to determine the genomic response of the eastern oyster in Louisiana to simulated ocean acidification. …

The Ecology Of Antibiotic Resistance: Sources And Persistence Of Vancomycin-Resistant Enterococci And Antibiotic Resistant Genes In Aquatic Environments, Suzanne M. Young

USF Tampa Graduate Theses and Dissertations

The growing crisis of antibiotic resistance is a major threat to ecosystems and human health. Infections caused by known and emerging antibiotic resistant pathogens are on the rise globally, with approximately 700,000 deaths per year caused by antibiotic resistant bacteria (1). In the United States, infections from antibiotic resistant bacteria cause more than 2 million illnesses and 23,000 deaths (2). Antibiotic resistant bacteria and antibiotic resistance genes are released into aquatic ecosystems through hospital waste, residential sewer lines and animal agricultural waste streams. Animal agriculture accounts for approximately 70% of antibiotic use in the United States (3). In agricultural ecosystems, …

Mode And Rate Of Evolution Of Haemosporidian Mitochondrial Genomes: Timing The Radiation Of Avian Parasites, M. Andreína Pacheco, Nubia E. Matta, Gediminas Valkiūnas, Patricia G. Parker, Beatriz Mello, Craig E. Stanley Jr., Miguel Lentino, Maria Alexandra Garcia-Amado, Michael Cranfield, Sergei L. Kosakovsky Pond, Ananias A. Escalante

Harold W. Manter Laboratory of Parasitology: Library Materials

Haemosporidians are a diverse group of vector-borne parasitic protozoa that includes the agents of human malaria; however, most of the described species are found in birds and reptiles. Although our understanding of these parasites’ diversity has expanded by analyses of their mitochondrial genes, there is limited information on these genes’ evolutionary rates. Here, 114 mitochondrial genomes (mtDNA) were studied from species belonging to four genera: Leucocytozoon, Haemoproteus, Hepatocystis, and Plasmodium. Contrary to previous assertions, the mtDNA is phylogenetically informative. The inferred phylogeny showed that, like the genus Plasmodium, the Leucocytozoon and Haemoproteus genera are not monophyletic groups. Although …

Optimizing Sperm Collection Procedures In Zebrafish, Madelyn B. Wasden, Rachel L. Roberts, April Delaurier

Journal of the South Carolina Academy of Science

Zebrafish are a highly-valued model organism used for developmental biology research. Zebrafish can be used for genetic manipulation and hence, many mutant and transgenic lines exist. It is impractical to maintain lines of adult zebrafish, due to resource constraints and the need to continuously produce new generations. Therefore, a practical way to preserve zebrafish lines is to freeze sperm and retrieve lines using in vitro fertilization of fresh eggs. Most existing in vitro protocols used by research labs have a wide variety of fertilization rates (ranging from 0% to >90%). Due to this variability, lines may be at risk of …

Kentucky Warbler (Vol. 93, No. 4), Kentucky Library Research Collections

The Kentucky Warbler

No abstract provided.