Life Sciences Commons^™

The Effects Of Excess Corticosterone On Lkb1 And Ampk Signaling In Skeletal Muscle Of Rats, Gary N. Nakken

Theses and Dissertations

Cushing's syndrome and glucocorticoid therapy lead to central obesity, insulin resistance, and symptoms of altered energy regulation similar to those observed in the metabolic syndrome. We hypothesized that excess glucocorticoids alter energy sensing/signaling in skeletal muscle through mediation of the LKB1/AMPK signaling pathway. To test this hypothesis, three 100 mg pellets of corticosterone were implanted subcutaneously in each of nine rats for two weeks. Responses were compared with sham operated controls fed ad libitum or food restricted to produce the body weights similar to the treatment group rats. After the treatment period, animals were anesthetized and the right gastrocnemius-plantaris and …

Regulation Of Mdm2 Mediated Nfκb2 Pathway In Human Lung Cancer, Lathika Mohanraj

Theses and Dissertations

Overexpression of oncoprotein MDM2 and mutations of tumor suppressor p53 are frequently observed in human cancers. The NFκB pathway is one of the deregulated pathways in oncogenesis. The overall goal of the project was to study the regulation of NFκB pathway by MDM2 in lung cancer. Our first effort was to determine the frequency of MDM2 overexpression in human lung tumor samples and to identify co-occurring abnormal gene expression by studying the levels of MDM2 and members of NFκB pathway with respect to p53 status. Higher than normal levels of MDM2 were found in approximately 30% of the cancer samples …

Clare Miller, Clare Miller, Institute Of Child Nutrition. Child Nutrition Archives.

Oral History Project (all interviews)

Clare Miller spent her career first working for the Louisiana State Department of Education as an Area Supervisor before becoming the Food Service Director for the Diocese of Lafayette. She then went to work for the United States Department of Agriculture in Washington, DC, from where she retired.

Using Pedometers As A Valid Method Of Determining Physical Activity Intensity Level, Alan M. Groves

Theses and Dissertations

As researchers explore the benefits of using pedometers to assess physical activity they are discovering that intensity of physical activity may be estimated from steps per minute (SPM). The purpose of this study was to determine the SPM and kilocalories (kcals) expended associated with moderate physical activity in middle school students (12 - 14 years old). Methods: Ninety-three (49 boys, 44 girls) middle school youth between the ages of 12 and 14, walked on a treadmill at four different speeds (4.0, 4.8, 5.64, and 6.4 km/h) for three minutes at each speed. Each participant wore a pedometer in order to …

Does Light Control Algal Abundance In Large River Systems?, Amy Macdonald

Theses and Dissertations

A limited amount of research has been done to investigate the factors influencing algal abundance in large river systems. This study examines light as the primary factor that controls algal abundance in the Upper Mississippi, Missouri and Ohio Rivers. Data were collected for 2004 in conjunction with the Environmental Monitoring Assessment Program- Great River Ecosystems EMAP-GRE project using EPA approved methods. Chlorophyll a concentrations were 34.6 µg•L-1 in the Upper Mississippi, 19.8 µg•L-1 in Missouri River and 9 µg•L-1 in the Ohio River for 2004. Chlorophyll a concentrations were significantly different among the three rivers (p<0.0001) but not between years. Inter-river variation could be loosely correlated with light availability: mean Average Irradiance Dosages, which consider factors that affect light climate (depth, transparency, velocity, surface irradiance), by river corresponded with mean chlorophyll a levels by river. Intra-river variation seemed to be due to both the influence of light and nutrients.

Crosstalk Between Mdm2 And Akt Signaling Pathway In Oncogenesis., Mahesh Ramamoorthy

Theses and Dissertations

MDM2, the human homologue of the Mouse Double Minute 2 gene product, has been shown to be over-expressed in many cancers and to induce tumorigenesis. The role of MDM2 in oncogenesis was thought to be p53 dependent. However recent years have shown MDM2 to be a key player in a complex network of interactions that affect cell cycle, apoptosis, and tumorigenesis in a p53 independent manner. Here we report a novel p53 independent role for the multidimensional protein MDM2; its ability to induce phosphorylation of Akt at serine 473 residue. Transient and stable over-expression of MDM2 in cultured cell lines …

Imaging Activity Of Neuronal Populations With New Long-Wavelength Voltage-Sensitive Dyes, Joseph P. Wuskell, Leslie M. Loew

UCHC Articles - Research

We have assessed the utility of five new long-wavelength fluorescent voltage-sensitive dyes (VSD) for imaging the activity of populations of neurons in mouse brain slices. Although all the five were capable of detecting activity resulting from activation of the Schaffer collateral-CA1 pyramidal cell synapse, they differed significantly in their properties, most notably in the signal-to-noise ratio of the changes in dye fluorescence associated with neuronal activity. Two of these dyes, Di-2-ANBDQPQ and Di-1-APEFEQPQ, should prove particularly useful for imaging activity in brain tissue and for combining VSD imaging with the control of neuronal activity via light-activated proteins such as channelrhodopsin-2 …

Lidar-Derived Benthic Habitat Maps Enable The Quantification Of Potential Dredging Impacts To Coral Reef Ecosystems, Brian K. Walker, Richard E. Dodge, David S. Gilliam

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

An essential component to the analysis of ecosystem services is to characterize and define the major habitats within the area of interest. Aerial photography and/or satellite imagery coupled with geographic information systems (GIS) are frequently used to identify and quantify habitats in open terrestrial ecosystems. However, it is more difficult to successfully apply this methodology to deeper, <20 m, underwater environments. Light detection and ranging (LIDAR), a relatively new remote sensing technology that provides detailed bathymetry, can be used when adequate imagery is not available. This study uses LIDAR as the basis to characterize various benthic habitats in a coral reef ecosystem in order to quantify the habitats for a Habitat Equivalency Analysis (HEA) related to planned dredging activities to expand the Port Everglades entrance channel, Broward County, FL. As part of a regional mapping effort, marine benthic habitats were characterized for Broward County, FL. A mosaic of interpolated, sunshaded, laser bathymetry data served as the foundation upon which acoustic ground discrimination, limited subbottom profiling and aerial photography, and groundtruthing data were added in a GIS to aid in interpretation of benthic habitats. Expert-driven visual interpretation outlined geomorphological features in the LIDAR data at a scale of 1:6000 with a minimum mapping unit of 1 acre. The map of Broward County yielded a high overall accuracy of 89.6%. To quantify the potential dredging impacts, the habitat layer was clipped in GIS to the boundaries of anticipated direct and indirect impacts of the proposed project. Then the area of each clipped polygon was totaled for each habitat by impact type. HEA and Florida’s Uniform Mitigation Assessment Method (UMAM) were performed using these areas. This work would not have been possible using satellite imagery or aerial photography alone and illustrates the capability of relatively new remote sensing technologies to aid in the definition and quantification of habitats for ecosystem service analyses.

Ecological Niche Of The 2003 West Nile Virus Epidemic In The Northern Great Plains Of The United States, Michael C. Wimberly, Michael B. Hildreth, Stephen P. Boyte, Eric Lindquist, Lon Kightlinger

Veterinary and Biomedical Sciences Faculty Publications

Background

he incidence of West Nile virus (WNv) has remained high in the northern Great Plains compared to the rest of the United States. However, the reasons for the sustained high risk of WNv transmission in this region have not been determined. To assess the environmental drivers of WNv in the northern Great Plains, we analyzed the county-level spatial pattern of human cases during the 2003 epidemic across a seven-state region.

Methodology/Principal Findings

County-level data on WNv cases were examined using spatial cluster analysis, and were used to fit statistical models with weather, climate, and land use variables as predictors. …

Communicator, Dec. 2008, San Jose State University, Department Of Kinesiology

Communicator (Kinesiology)

Volume 21, Issue 2

Integrating Landscapes That Have Experienced Rural Depopulation And Ecological Homogenization Into Tropical Conservation Planning, Aerin L. Jacob, Ismael Vaccaro, Raja Sengupta, Joel N. Hartter, Colin A. Chapman

Geography

If current trends of declining fertility rates and increasing abandonment of rural land as a result of urbanization continue, this will signal a globally significant transformation with important consequences for policy makers interested in conservation planning. This transformation is presently evident in a number of countries and projections suggest it may occur in the future in many developing countries. We use rates of population growth and urbanization to project population trends in rural areas for 25 example countries. Our projections indicate a general decline in population density that has either occurred already (e.g., Mexico) or may occur in the future …

Smokejumper Obituary: Heikkenen, Herman J. (Idaho City 1951), National Smokejumper Association

Smokejumper Obituaries

No abstract provided.

Effects Of Olfactory And Visual Predators On Nest Success And Nest-Site Selection Of Waterfowl In North Dakota, Jennifer Borgo

Green Canyon Environmental Research Area, Logan Utah

No abstract provided.

The Biological Soil Crusts Of The San Nicolas Island: Enigmatic Algae From A Geographically Isolated Ecosystem, Valerie R. Flechtner, Jeffrey R. Johansen, Jayne Belnap

Biology

Composite soil samples front 7 sites on San Nieolas Island were evaluated quantitatively and qualitatively for the presence of cyanobacteria and enkaryotic microalgae. Combined data demonstrated a rich algal flora with 19 cyanobacterial and 19 eukaryotic microalgal genera being identified, for a total of 56 species. Nine new species were identified and described among the cyanobacteria and the enkaryotic microalgae that were isolated: Leibleinia edaphica, Aphanothece maritima, Chroococcidiopsis edaphica, Cyanosarcina atroceneta, Hassallia californica, Hassallia pseudo-ramosissima, Microchaete terrestre, Palmellopsis californicus, and Pseudotetracystis compactis. Distinct distributional patterns of algal taxa existed among sites on the island and among soil algal floras of …

Developing 1990, 2000, And 2005 Impervious Surface Estimates For Southern York County, Maine, David G. Justice, Fay A. Rubin

PREP Reports & Publications

Estimates of impervious surface acreage in 1990, 2000, and 2005 were generated for an 11-town region in York County, Maine, covered by the Piscataqua Region Estuaries Partnership (PREP). The project extended previous work done in New Hampshire, relying on comparable satellite-based data sources and image processing methodologies. As a result, standardized impervious surface estimates are now available for the entirety of the PREP region. The impervious surface estimates were derived by applying both traditional and subpixel classification techniques to 30-meter Landsat 5 Thematic Mapper (TM) and Landsat 7 Enhanced Thematic Mapper Plus (ETM+) satellite image data. The classifications indicated that …

Acute Effects Of Whole-Body Vibration On Lower Extremity Muscle Performance In Persons With Multiple Sclerosis, Kurt Jackson, Harold L. Merriman, Paul M. Vanderburgh, C. Jayne Brahler

Health and Sport Science Faculty Publications

Background and Purpose: Whole-body vibration (WBV) is a relatively new form of exercise training that may influence muscle performance. This study investigated the acute effects of high (26 Hz) and low (2 Hz) frequency WBV on isometric muscle torque of the quadriceps and hamstrings in persons with multiple sclerosis (MS).

Participants and Method: Fifteen individuals (mean age = 54.6 years, SD = 9.6) with MS and Expanded Disability Status Scale (EDSS) scores ranging from 0-6.5 (mean = 4.2, SD = 2.3) participated in this randomized cross-over study. Following baseline measures of isometric quadricep and hamstring torque, subjects were exposed to …

Gene Expression Profiles As Molecular Indicators Of Dissolved Oxygen Stress In Grass Shrimp Palaemonetes Pugio Holthuis 1949, Tiandao Li

Dissertations

Occurrence and severity of hypoxia is increasing in coastal and estuarine environments, and recovery of impacted habitats and living resources is slow. Detection of early biological effects of hypoxia is needed for timely remedial action to be taken. The overall objectives of this research was to develop molecular indicators of dissolved oxygen stress to assess the biological impact of hypoxia in coastal estuaries and validate their use through a combination of laboratory and field studies. To achieve these goals, grass shrimp, Palaemonetes pugio, oxygen-sensitive and hypoxia-tolerant species abundant in estuarine systems, were exposed to hypoxia under controlled laboratory conditions, and …

Yellow Head Virus: Transmission And Genome Analyses, Hongwei Ma

Dissertations

Yellow head virus (YHV) is an important pathogen to shrimp aquaculture. Among 13 species of naturally YHV-negative crustaceans in the Mississippi coastal area, the daggerblade grass shrimp, Palaemonetes pugio, and the blue crab, Callinectes sapidus, were tested for potential reservoir and carrier hosts of YHV using PCR and real time PCR. The YHV replicated in the daggerblade grass shrimp, and was still detectable on 36 d post-inoculation, causing 8% mortality after injection. However, YHV did not replicate in the blue crab. These data suggest that the daggerblade grass shrimp could act as a reservoir host for YHV. Storage conditions of …

Early Season Weed Suppression In Buckwheat Using Clopyralid, Ona Sakaliene, Sharon A. Clay, William C. Koskinen, Gediminas Almantas

Agronomy, Horticulture and Plant Science Faculty Publications

Currently there are no herbicides registered for direct application to buckwheat for broadleaf weed control. This 4-yr Lithuanian study examined weed control using several rates of clopyralid alone or combined with a single rate of desmedipham. Most applications were applied at the 1-leaf stage of crop growth, however, one rate of clopyralid was applied pre-emergence (PRE) in 2 of the 4 yr. Buckwheat injury was evident within a few days after application (or emergence) with all treatments, but by harvest, no symptoms were evident. In the 2 yr with greatest weed densities, densities were reduced with increasing clopyralid rates alone …

Chlorovirus-Mediated Membrane Depolarization Of Chlorella Alters Secondary Active Transport Of Solutes, Irina V. Agarkova, David Dunigan, James R. Gurnon, Timo Greiner, Julia Barres, Gerhard Thiel, James L. Van Etten

Department of Plant Pathology: Faculty Publications

Paramecium bursaria chlorella virus 1 (PBCV-1) is the prototype of a family of large, double-stranded DNA, plaque-forming viruses that infect certain eukaryotic chlorella-like green algae from the genus Chlorovirus. PBCV-1 infection results in rapid host membrane depolarization and potassium ion release. One interesting feature of certain chloroviruses is that they code for functional potassium ion-selective channel proteins (Kcv) that are considered responsible for the host membrane depolarization and, as a consequence, the efflux of potassium ions. This report examines the relationship between cellular depolarization and solute uptake. Annotation of the virus host Chlorella strain NC64A genome revealed 482 putative …

Fisheries Research Report No. 182 - A Likelihood Analysis Of Non-Indigenous Marine Species Introduction To Fifteen Ports In Western Australia, Justin I. Mcdonald

Fisheries Research Reports

As an island continent, Australia is heavily dependent upon maritime transport with over 95% of its imports and exports transported by ship (Australian State of the Environment Committee, 2001). With about one third of Australia’s coastline, Western Australia ranks fourth of the six states and territory in the number of known non-indigenous marine species.

In this study fifteen ports in Western Australia were assessed on the potential for non-indigenous marine species to become introduced through ballast water and biofouling. The overall vesselmediated incursion risk to Western Australian ports was calculated by summing the relative incursion threat posed by visits to …

Biological Responses In A Dynamic Bouyant River Plume, Mark A. Moline, Thomas K. Frazer, Robert Chant, Scott Glenn, Charles A. Jacoby, John R. Reinfelder, Jennifer Yost, Meng Zhou, Oscar Schofield

Biological Sciences

Buoyant river plumes are highly dynamic and often characterized by marked physical and chemical gradients that interact to drive biological responses. For example, interactions among factors resulting in algal growth (e.g., nutrient and light availability) and algal loss (e.g., sinking and zooplankton grazing) vary with spatiotemporal changes in physics and chemistry. The nature of these interactions profoundly influences the transfer and transformation of materials carried by the plume, including nutrients and metals. In April 2005, during the Lagrangian Transport and Transformation Experiment (LaTTE), water from the Hudson River recirculated in a nearshore eddy before moving southward to mix with relatively …

Three-Dimensional Microfluidic Devices Fabricated In Layered Paper And Tape, Andres W. Martinez, Scott T. Phillips, George M. Whitesides

Chemistry and Biochemistry

This article describes a method for fabricating 3D microfluidic devices by stacking layers of patterned paper and double-sided adhesive tape. Paper-based 3D microfluidic devices have capabilities in microfluidics that are difficult to achieve using conventional open-channel microsystems made from glass or polymers. In particular, 3D paper-based devices wick fluids and distribute microliter volumes of samples from single inlet points into arrays of detection zones (with numbers up to thousands). This capability makes it possible to carry out a range of new analytical protocols simply and inexpensively (all on a piece of paper) without external pumps. We demonstrate a prototype 3D …

An Analysis Of Illegal Bushmeat Availability In Local Restaurants Located In Voi, Kenya, Bridget A. Sutton

Masters Theses & Specialist Projects

The illegal bushmeat harvest has been identified as a reason for declining wildlife populations throughout much of Africa. For many years the trade was thought to exist primarily in Western Africa. The illegal use of bushmeat in Eastern Africa, including Kenya, went undocumented and unstudied. In 2004, the Born Free Foundation published a study which claimed illegal sale of wild game was substantial in butcheries throughout Nairobi, Kenya. In an effort to determine other markets of the commercial trade, the goal of this study was to analyze local restaurants in Voi, Kenya for illegal bushmeat sale. The town of Voi …

Mathematical Models Of Zea Mays: Grain Yield And Aboveground Biomass Applied To Ear Flex And Within Row Spacing Variability, Todd Curtis Ballard

Masters Theses & Specialist Projects

Field studies were conducted during the summers of 2007 and 2008 at the Agricultural Research and Education Complex, Western Kentucky University, Warren County, KY and commercial production fields in Caldwell County, KY, Warrick County IN, and Vanderburgh County, IN. The goals of these studies were to further validate the Duncan grain yield model, the Russell aboveground biomass model, and to study the effect of inconsistent spacing within rows on Zea mays L. yield. Plant spacing other than uniform decreases grain yield and profitability. The population experiments conducted at the Warren County location were a randomized complete block design with three …

Mexican Cliffrose In The Landscape, Heidi Kratsch, Graham Hunter

Gardening

No abstract provided.

Reviewing Existing Knowledge Prior To Conducting Animal Studies, Andrew Knight

Experimentation Collection

Highly polarised viewpoints about animal experimentation have often prevented agreement. However, important common ground between advocates and opponents was demonstrated within a discussion forum hosted at www.research-methodology.org.uk in July–August 2008, by the independent charity, SABRE Research UK. Agreement existed that many animal studies have methodological flaws — such as inappropriate sample sizes, lack of randomised treatments, and unblinded outcome assessments — that may introduce bias and limit statistical validity. There was also agreement that systematic reviews of the human utility of animal models yield the highest quality of evidence, as their reliance on methodical and impartial methods to select significant …

Developmental Toxicity Testing: Protecting Future Generations?, Jarrod Bailey

Experimentation Collection

A recent editorial is discussed, which implied that animal-based developmental and reproductive toxicology tests will continue to be crucial, that the thalidomide disaster could have been prevented by more animal testing, and that tests on juvenile animals would help to protect children (as developing adults) from the adverse effects of pharmaceuticals. It is argued that animal tests in these scientific areas do not provide reliable data that are predictive for human responses and, even if they did, the tests are too expensive and time-consuming for application to the very large number of substances that need to be tested. It is …

Faecal-Centric Approaches To Wildlife Ecology And Conservation; Methods, Data And Ethics, C. T. Darimont, T. E. Reimchen, H. M. Bryan, P. C. Paquet

Ethics and Conservation Biology Collection

Abundant and commonly encountered in the field, wildlife faeces have long attracted scientists. Recent advances in molecular techniques, however, especially when coupled with creative study designs, can now yield a great variety of high quality data. Herein, we review the opportunities and challenges of faecal-centric approaches to address ecological and conservation questions using wolves of coastal British Columbia, Canada, as a case system. We begin by discussing methodological considerations, which should have broad applicability to any wildlife study system. We then summarize the extensive and unique variety of data that has emerged from our ‘facts from faeces’ approach with wolves, …

Recombination-Based In Vivo Expression Technology Identifies Helicobacter Pylori Genes Important For Host Colonization, Andrea Castillo, Andrew J. Woodruff, Lynn E. Connolly, William E. Sause, Karen M. Ottemann

Biology Faculty Publications

Here we undertook to identify colonization and gastric disease-promoting factors of the human gastric pathogen Helicobacter pylori as genes that were induced in response to the stomach environment. Using recombination-based in vivo expression technology (RIVET), we identified six promoters induced in the host compared to laboratory conditions. Three of these promoters, designated Pivi10, Pivi66, and Pivi77, regulate genes that H. pylori may use to interact with other microbes or the host. Pivi10 likely regulates the mobA, mobB, and mobD genes, which have potential roles in horizontal gene transfer through plasmid mobilization. Pivi66 occurs in the cytotoxin-associated gene pathogenicity island, a …