Life Sciences Commons^™

Varying Efficiency Of Long-Term Replication Of Papillomaviruses In Saccharomyces Cerevisiae, Adam J. Rogers, Malte Loggen, Karen Lee, Peter C. Angeletti

Nebraska Center for Virology: Faculty Publications

Human papillomaviruses (HPVs) replicate in mitotically active basal keratinocytes. Two virally encoded proteins, E1, a helicase, and E2, a transcription factor, are important players in replication and maintenance of HPV episomes. We previously showed that HPV16 could replicate stably in Saccharomyces cerevisiae [Angeletti, P.C., Kim, K., Fernandes, F.J., and Lambert, P.F. (2002)] and we identified cis-elements that mediate replication and maintenance [J. Virol. 76(7), 3350-3358.; Kim, K., Angeletti, P.C., Hassebroek, E.C., and Lambert, P.F. (2005)]. Here, we demonstrate that although multiple HPV genomes replicate stably in yeast, they do so with differing long-term efficiency; HPV6-Ura3 is replicated at the …

Wolf Body Mass Cline Across Minnesota Related To Taxonomy?, L. David Mech, William J. Paul

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Recent genetic studies suggest that in northern Minnesota two species of wolves (Canis lupus L., 1758 or western wolf and Canis lycaon Schreber, 1775 (= Canis rufus Audubon and Bachman, 1851) or eastern wolf) meet and hybridize. However, little morphological information is available about these two types of wolves in Minnesota. We analyzed the mass of 950 female wolves and 1006 males older than 1 year from across northern Minnesota and found that it increased from 26.30 ± 0.56 kg (mean ± SE) for females and 30.60 ± 0.72 kg for males in northeastern Minnesota to 30.01 ± 0.43 …

Winter Cover Crops And Vinegar For Early-Season Weed Control In Sustainable Cotton, P. J. Moran, S. M. Greenberg

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Weeds may be suppressed by winter cover crops and the use of organic herbicides such as vinegar. Black oat (Avena strigosa) and hairy vetch (Vicia villosa) winter cover crops were planted for 2 years as part of a sustainable production system for cotton in the Lower Rio Grande Valley of Texas, and were till-killed each spring prior to cotton planting. Palmer amaranth (Amaranthus palmeri), common purslane (Portulaca oleracea), and sunflower (Helianthus annuus) were frequently-encountered winter and spring weeds. Both cover crops controlled winter weeds as well as did winter tillage …

A Landscape Perspective In Managing Vegetation For Beneficial Plant-Pestnatural Enemy Interactions: A Foundation For Areawide Pest Management, Michael J. Brewer, Takuji Noma, Norman C. Elliott

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

In the USA, Europe and increasingly in other regions, cropping systems designed for high production output are significant features of the landscape. Deployment of mechanized and high-input cropping systems over the last 50 years has resulted in substantial transformation and fragmentation of major grassland, shrubland and woodland systems throughout the world. These cropping systems are typically less diverse in species composition, structure and ecological functioning than those found in the original plant community (Altieri, 2004). Decreases in plant diversity of agroecosystems (i.e. the crops themselves and surrounding remnants of the original plant system) have negatively affected ecosystem functions (Freemark, 2005). …

Comparison Of Nitrogen Fertilization Methods And Rates For Subsurface Drip Irrigated Corn In The Semi-Arid Great Plains, D. D. Tarkalson, J. O. Payero

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

In semi‐arid areas such as western Nebraska, interest in subsurface drip irrigation (SDI) for corn is increasing due to restricted irrigation allocations. However, crop response quantification to nitrogen (N) applications with SDI and the environmental benefits of multiple in‐season (IS) SDI N applications instead of a single early‐season (ES) surface application are lacking. The study was conducted in 2004, 2005, and 2006 at the University of Nebraska‐Lincoln West Central Research and Extension Center in North Platte, Nebraska, comparing two N application methods (IS and ES) and three N rates (128, 186, and 278 kg N ha^-1) using a …

Effects Of Shielding Adenoviral Vectors With Polyethylene Glycol On Vector-Specific And Vaccine-Mediated Immune Responses, Eric A. Weaver, Michael A. Barry

Nebraska Center for Virology: Faculty Publications

Many individuals have been previously exposed to human adenovirus serotype 5 (Ad5). This prior immunity has long been known to hinder its use for gene therapy and as a gene-based vaccine. Given these immunogenicity problems, we have tested whether polyethylene glycol (PEG) can blunt immune effects against Ad5 during systemic and mucosal vaccination. Ad5 vectors were covalently modified with 5-, 20-, and 35-kDa linear PEG polymers and evaluated for their ability to produce immune responses against transgene antigen prod- ucts and the vector itself. We show that shielding Ad5 with different-sized PEGs generally reduces transduction and primary antibody responses by …

Comparison Of Total Mercury And Methylmercury Cycling At Five Sites Using The Small Watershed Approach, James B. Shanley, M. Alisa Mast, Donald H. Campbell, George R. Aiken, David P. Krabbenhoft, Randall J. Hunt, John F. Walker, Paul F. Schuster, Ann Chalmers, Brent T. Aulenbach, Norman E. Peters, Mark Marvin-Dipasquale, David W. Clow, Martin M. Shafer

United States Geological Survey: Staff Publications

The small watershed approach is well-suited but underutilized in mercury research. We applied the small watershed approach to investigate total mercury (THg) and methylmercury (MeHg) dynamics in streamwater at the five diverse forested headwater catchments of the US Geological Survey Water, Energy, and Biogeochemical Budgets (WEBB) program. At all sites, baseflow THg was generally less than 1 ng L^-1 and MeHg was less than 0.2 ng L^-1. THg and MeHg concentrations increased with streamflow, so export was primarily episodic. At three sites, THg and MeHg concentration and export were dominated by the particulate fraction in association with …

Evolutionary And Structural Analyses Of Alpha-Papillomavirus Capsid Proteins Yields Novel Insights Into L2 Structure And Interaction With L1, John Lowe, Debasis Panda, Suzanne Rose, Ty Jensen, Willie Hughes, For Yue Tso, Peter C. Angeletti

Nebraska Center for Virology: Faculty Publications

Background: PVs (PV) are small, non-enveloped, double-stranded DNA viruses that have been identified as the primary etiological agent for cervical cancer and their potential for malignant transformation in mucosal tissue has a large impact on public health. The PV family Papillomaviridae is organized into multiple genus based on sequential parsimony, host range, tissue tropism, and histology. We focused this analysis on the late gene products, major (L1) and minor (L2) capsid proteins from the family Papillomaviridae genus Alpha-papillomavirus. Alpha-PVs preferentially infect oral and anogenital mucosa of humans and primates with varied risk of oncogenic transformation. Development of evolutionary associations between …

Early Childhood Infection By Human Herpesvirus 8 In Zambia And The Role Of Human Immunodeficiency Virus Type 1 Coinfection In A Highly Endemic Area, Veenu Minhas, Kay L. Crabtree, Ann Chao, Tendai J. M'Sola, Chipepo Kankasa, Marc Bulterys, Charles D. Mitchell, Charles Wood

Nebraska Center for Virology: Faculty Publications

Kaposi’s sarcoma occurs at high incidence among Zambian adults and children, but there is a paucity of data on human herpesvirus 8 (HHV-8) incidence and routes of infection, especially in children. Between 1998 and 2004, the authors conducted a prospective study of viral transmission in a cohort of 684 children in Lusaka, Zambia, to estimate the annual incidence of HHV-8 from birth through 48 months of age. Maternal and pediatric human immunodeficiency virus type 1 (HIV-1) infection status was also determined. The results, based on 1,532 child-years of follow-up, showed that HHV-8 seroconversion occurs early in life. The incidence rate …

Effects, Uptake, And Fate Of 2,4,6-Trinitrotoluene Aged In Soil In Plants And Worms, Elly Ph Best, Henry E. Tatem, Kaaren N. Geter, Melissa L. Wells, Brian K. Lane

United States Army Corps of Engineers, Omaha District

The present study was aimed at providing data to be used at predicting exposure-based effects of 2,4,6-trinitrotoluene (TNT) aged in soil on endpoint organisms representing two trophic levels. These data can be used to define criteria or reference values for environmental management and conducting specific risk assessment. Long-term exposure tests were conducted to evaluate sublethal toxicity and uptake of aged soil-based explosives, with TNT as the main contaminant. In these tests, plants were exposed for 55 d, and biomass and explosives residues were determined. Worms were exposed for 28 and 42 d, and biomass, number, and tissue residues were determined. …

Modified Kigali Combined Staging Predicts Risk Of Mortality In Hiv-Infected Adults In Lusaka, Zambia, Philip J. Peters, Isaac Zulu, Nzali G. Kancheya, Shabir Lakhi, Elwyn Chomba, Cheswa Vwalika, Dhong-Jin Kim, Ilene Brill, Jareen Meinzen-Derr, Amanda Tichacek, Susan A. Allen

Nebraska Center for Virology: Faculty Publications

We assessed the utility of the modified Kigali combined (MKC) staging system for predicting survival in HIV-infected Zambian adults in a prospective, longitudinal, open cohort. From 1995 to 2004, HIV-discordant couples (one HIV-infected partner and one HIV-negative partner) were recruited from couples’ voluntary counseling and testing centers in Lusaka, Zambia and followed at 3-month intervals. MKC stage, which incorporates clinical stage with erythrocyte sedimentation rate (ESR), hematocrit, and body mass index (BMI), was determined at enrollment. Kaplan–Meier survival and Cox proportional hazard methods were used to calculate median survival and relative hazards. We enrolled 1479 HIV-discordant couples with a combined …

Biology And Biological Control Of Exotic True Thistles, Rachel Winston, Rich Hansen, Mark Schwarzlander, Eric Coombs, Carol Bell Randall, Rodney Lym

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

“Thistle” is an old English name for a large variety of weedy, prickly plants that grow throughout the world. The most notable characteristics of thistles are the prickly stems and leaves and the bracts around the flower head. While many different plants have “thistle” in their common name, only certain plant species fit the taxonomic requirements of being considered “true thistles.” True thistle species fall within the family Asteraceae, the tribe Cardueae, and the subtribe Carduinae. Examples of plants that are not true thistles include yellow starthistle (subtribe Centaureinae), sow thistle (subtribe Sonchinae), and Russian thistle (family Chenopodiaceae). Only true …

Synthesis And Bioassay Of Improved Mosquito Repellents Predicted From Chemical Structure, Alan R. Katritzky, Zuoquan Wang, Svetoslav Slavov, Maia Tsikolia, Dimitar Dobchev, Novruz G. Akhmedov, C. Dennis Hall, Ulrich R. Bernier, Gary G. Clark, Kenneth Linthicum

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Mosquito repellency data on acylpiperidines derived from the United States Department of Agriculture archives were modeled by using molecular descriptors calculated by CODESSA PRO software. An artificial neural network model was developed for the correlation of these archival results and used to predict the repellent activity of novel compounds of similar structures. A series of 34 promising N-acylpiperidine mosquito repellent candidates (4a–4q’) were synthesized by reactions of acylbenzotriazoles 2a–2p with piperidines 3a–3f. Compounds (4a–4q’) were screened as topically applied mosquito repellents by measuring the duration of repellency after application to cloth patches worn on the arms of human volunteers. Some …

Using The Solvent Retention Capacity Test When Breeding Wheat For Diverse Production Environments, Carl Walker, Kimberly A. Garland-Campbell, Brady Carter, Kimberlee Kidwell

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The solvent retention capacity (SRC) test is used to predict commercial baking performance of soft wheat (Triticum aestivum L.) by measuring the capacity of flour to retain each of four solvents— water, Na₂CO₃, sucrose, and lactic acid— to assess overall absorption capacity, starch damage, pentosan and gliadin content, and glutenin quality, respectively. Our objectives were to determine sources of variation in the test, repeatability, and optimum scale and resource allocation needed to maximize efficiency. Duplicate SRC tests were conducted for each solvent using two flour sample sizes (5 and 0.2 g) from two field replications …

Illustrated Identification Keys To Strongylid Parasites Strongyllidae Nematoda Of Horses Zebras And Asses Equidae, J. Ralph Lichtenfels, Vitaliy A. Kharchenko, Grigory M. Dvojnos

Harold W. Manter Laboratory of Parasitology: Faculty Publications

The Equidae (the horse, Equus caballus, the ass, Equus asinus, zebras and their hybrids) are hosts to a great variety of nematode parasites, some of which can cause significant morbidity or mortality if individual hosts are untreated. Worldwide the nematode parasites of horses belong to 7 suborders, 12 families, 29 genera and 83 species. The great majority (19 of 29 genera and 64 of 83 species) are members of the family Strongylidae, which includes the most common and pathogenic nematode parasites of horses. Only the Strongylidae are included in this treatise.

The Strongylidae (common name strongylids) of horses …

Hamulonema Gen. Nov. For Teladorsagia Hamata And Ostertagia Kenyensis In The Ostertagiinae Fauna (Nematoda: Trichostrongyloidea) From African Ungulates, Eric P. Hoberg, Arthur Abrams

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Hamulonema gen. nov. is proposed for Teladorsagia hamata and Ostertagia kenyensis in the ostertagiine nematode fauna found in artiodactyl hosts from Africa. Monomorphic species representing this genus are characterized by a bilaterally symmetrical and parallel synlophe in males and females, a 2-2-1 bursal formula, an accessory bursal membrane that is strongly cuticularized and reduced, a strongly reduced dorsal lobe and ray, and robust spicules with a simple, weakly pointed, ventral process, and curved, hooklike dorsal process. Species referred to Hamulonema nov. gen. are immediately distinguished from those of Camelostrongylus, Longistrongylus, Marshallagia, Orloffia, Ostertagia, and Pseudomarshallagia …

Nebraska Winery And Grape Growers Forum And Trade Show, John Owens

John Owens: Speeches and Appearances

Good afternoon, everyone, and welcome to this 11th annual Nebraska Winery and Grape Growers Forum and Trade Show. I'm John Owens, University of Nebraska Vice President and Harlan Vice Chancellor of the Institute of Agriculture and Natural Resources. I'm delighted to be with you on this second day of a very fine and informative conference.

Nebraska Urban Pest Management Conference, John Owens

John Owens: Speeches and Appearances

It is my very great pleasure to welcome each of you to this 16th Annual Nebraska Urban Pest Management Conference here in Lincoln. I'm John Owens, University of Nebraska Vice President and Harlan Vice Chancellor of the Institute of Agriculture and Natural Resources, and I am so glad to be here with you this morning. As an entomologist, this conference certainly is one for which I have great affinity and much interest.

Carl Albin Spader Leadership Luncheon, John Owens

John Owens: Speeches and Appearances

In the past two years you've had a number of opportunities to explore and strengthen your own, personal leadership abilities. You've also been able to observe and study the leadership styles of people working at the state, national, and international levels.

Casnr Salute To Graduates, John Owens

John Owens: Speeches and Appearances

We appreciate your being with us this afternoon as we celebrate the accomplishments of tomorrow's graduates from the University of Nebraska-Lincoln. Thank you for attending and, congratulations to the class of 2008! This ceremony has become both a fixture and a tradition in the College of Agricultural Sciences and Natural Resources. As a matter of fact, it took the national "First Place Award" in a 2006 competition that was open to all universities in the United States.

Louv Presentation, John Owens

John Owens: Speeches and Appearances

Good evening everyone, and welcome to this highly anticipated presentation by Richard Louv, author of "Last Child in the Woods: Saving our Children from Nature Deficit Disorder."

Master Conservationist Presentations 2008, John Owens

John Owens: Speeches and Appearances

Our first Master Conservationist award this evening goes to Curtis and Sandi Roth of Gordon, in the Panhandle, District A. Would Curtis and Sandi please come forward? When Roth decided to change his 2,030 dryland corn acres from a conventional to a no-till system in 1993, most of the information came from newsletters and magazines about experiences farther east. He began by adapting methods and equipment to the climate and soils of northwestern Nebraska. Today Curtis uses no till exclusively and follows a rotation of winter and spring wheat, sunflowers, corn, alfalfa, and millet. This no-till system has allowed Roth …

Ianr Research And Extension Centers And Their Associated Districts, John Owens

John Owens: Speeches and Appearances

It's a pleasure to have this opportunity to speak with you about the University’s four strategically placed Research and Extension Centers and their associated extension districts, all part of the Institute of Agriculture and Natural Resources at the University of Nebraska-Lincoln.

Krvn - Gudmundsen Field Day, John Owens

John Owens: Speeches and Appearances

John, the Institute of Agriculture and Natural Resources has various locations throughout Nebraska for research and educational purposes. One such location is the Gudmundsen Sandhills Laboratory, which this past week was the site for the annual Youth Field Day.

Presentation Remarks: Gamma Sigma Delta Award Of Merit, John Owens

John Owens: Speeches and Appearances

I am really pleased to have this opportunity to present the 2008 Gamma Sigma Delta Award of Merit to Alan Baquet. Being here to say "Congratulations, Alan," is a special treat for me - and I do say, "Congratulations, Alan." You are very deserving of this honor.

Bullets For Casnr Faculty Meeting Remarks, John Owens

John Owens: Speeches and Appearances

No abstract provided.

National Science Foundation - 4-H Robotics Grant Announcement, John Owens

John Owens: Speeches and Appearances

Bullets for announcement of the nearly $2.5 million grant to 4-H from the National Science Foundation to take its robotics curriculum national.

Minimal Nutrition Intervention With High-Protein/Low-Carbohydrate And Low-Fat, Nutrient-Dense Food Supplement Improves Body Composition And Exercise Benefits In Overweight Adults: A Randomized Controlled Trial, Christopher M. Lockwood, Jordan R. Moon, Sarah E. Tobkin, Ashley A. Walter, Abbie E. Smith, Vincent J. Dalbo, Joel T. Cramer, Jeffrey R. Stout

Department of Nutrition and Health Sciences: Faculty Publications

Background: Exercise and high-protein/reduced-carbohydrate and -fat diets have each been shown separately, or in combination with an energy-restricted diet to improve body composition and health in sedentary, overweight (BMI > 25) adults. The current study, instead, examined the physiological response to 10 weeks of combined aerobic and resistance exercise (EX) versus exercise + minimal nutrition intervention designed to alter the macronutrient profile, in the absence of energy restriction, using a commercially available high-protein/low-carbohydrate and low-fat, nutrient-dense food supplement (EXFS); versus control (CON).

Methods: Thirty-eight previously sedentary, overweight subjects (female = 19; male = 19) were randomly assigned to either CON (n …

The Effect Of Beta-Alanine Supplementation On Neuromuscular Fatigue In Elderly (55–92 Years): A Double-Blind Randomized Study, Jeffrey R. Stout, B. Sue Graves, Abbie E. Smith, Michael J. Hartman, Joel T. Cramer, Travis W. Beck, Roger C. Harris

Department of Nutrition and Health Sciences: Faculty Publications

Background: Ageing is associated with a significant reduction in skeletal muscle carnosine which has been linked with a reduction in the buffering capacity of muscle and in theory, may increase the rate of fatigue during exercise. Supplementing beta-alanine has been shown to significantly increase skeletal muscle carnosine. The purpose of this study, therefore, was to examine the effects of ninety days of beta-alanine supplementation on the physical working capacity at the fatigue threshold (PWC_FT) in elderly men and women.

Methods: Using a double-blind placebo controlled design, twenty-six men (n = 9) and women (n = 17) (age ± …

Presidential Address: Nothing Succeeds Like Excess, Steven A. Nadler

Harold W. Manter Laboratory of Parasitology: Faculty Publications

To the members of the American Society of Parasitologists, I offer my appreciation for the opportunity to serve as your president. When I was notified of my successful election as an officer, it brought to mind that famous remark by Adlai Stevenson who said, ‘‘In America, anybody can be president. That’s one of the risks you take.’’ So, what I initially perceived as somewhat of a risky venture, proved to be a more valuable and interesting experience than I anticipated. Let’s hope that my presidential address has a similar outcome.