Other Oceanography and Atmospheric Sciences and Meteorology Commons^™

Quantification And Diversity Of A Ubiquitous Ssdna Phage Group (Gokushovirinae) In The Red Sea Through The Polony Technique, Natalie A. Sawaya

USF Tampa Graduate Theses and Dissertations

With average concentrations of 107 virus-like particles per milliliter of seawater, viruses comprise the second largest biomass in the ocean, where they are a driving force of microbial evolution and constitute important roles in Earth’s biogeochemical cycles. Bacteriophage (phage), viruses that infect bacteria, are of particular importance in the marine ecosystem as they impact the efficiency of the microbial loop, which recycles carbon in surface waters, counteracting vertical export through the biological pump. Although double-stranded DNA phage have been researched extensively, single-stranded DNA (ssDNA) phage remain understudied, mostly due to methodological limitations.

The incorporation of rolling circle amplification (RCA) into …

Subtropical Estuarine Ecosystems Display Both Long-Term Stability And Change, Garrett L. Miller

USF Tampa Graduate Theses and Dissertations

Subtropical estuaries often support abundant and diverse faunal assemblages, but it is unclear how these productive ecosystems are responding to climate change. In the eastern Gulf of Mexico, estuarine faunal assemblages have been sampled for decades as part of a fisheries-independent long-term monitoring program. I assessed trends in submerged aquatic vegetation, water temperature, and the abundance, richness, and structure of faunal assemblages over more than two decades in four estuarine systems using this dataset. I used both univariate and multivariate analyses to quantify and describe the dynamics of these habitat and faunal variables. Further, I separated my analyses for summer …

Predicting Ph At In-Situ Temperature For Aquatic Environments, Sarah E. Bartoloni

USF Tampa Graduate Theses and Dissertations

pH is typically measured at a constant temperature and, as needed, converted to in-situ temperature using a system of thermodynamic equations. Using this equilibrium approach, adjustment of pH to in situ conditions requires two measured CO2 system parameters (pH, total alkalinity, dissolved inorganic carbon, or CO2 fugacity). Currently, when pH is the only measured CO2 system parameter, linear models are used to adjust the pH to in-situ temperature. Although many studies have attempted to optimize CO2 equilibrium constants (K1 and K2) for the CO2 system over a range of conditions, very little prior work has experimentally examined which CO2 system …

Exploring The Dynamics Of September Fish Spawning On The West Florida Shelf Through The Dna Barcoding Of Fish Eggs, Keith G. Keel

USF Tampa Graduate Theses and Dissertations

Identifying spawning areas for economically and ecologically important fishes is critical for fisheries conservation and ecosystem-based management. Additionally, monitoring the spawning dynamics of fishes is increasingly important as temperatures and oceanic conditions change. I used genetic barcoding to identify fish eggs collected across the West Florida Shelf (WFS) during September of 2013, 2014, and 2019. Fish eggs were collected on National Oceanic and Atmospheric Administration (NOAA) Southeast Area Monitoring and Assessment Program (SEAMAP) ichthyoplankton cruises using a Continuous Underway Fish Egg Sampler (CUFES). Analysis of 4,400 fish eggs from the three years resulted in the identification of 83 unique species …

Abundance, Distribution, And Diversity Of The Paralarval Cephalopod Community In The Northern Gulf Of Mexico, Shannon Leah Riley

USF Tampa Graduate Theses and Dissertations

The abundance, distribution, and diversity of cephalopod paralarvae from the upper water column (0-130 meters) in the northern Gulf of Mexico (GOM) was studied using samples collected during six ichthyoplankton surveys between 2009 and 2012. A total of 2240 cephalopod paralarvae belonging to 21 families were examined. Octopodidae, Enoploteuthidae, and Ommastrephidae were the most abundant taxa collected in the time series. Five taxa had significantly different abundances between some sampling periods, while no significant differences in abundance occurred between any GOM regions (northwest GOM shelf, north-central GOM shelf, West Florida Shelf, GOM slope, and GOM basin). The majority of taxa …

Bay Water Level Influences On Inundation And Morphological Changes Of A Semi-Connected Barrier Island During A Hurricane, Sydney D. Goodman

Graduate Theses and Dissertations (2019 - present)

This research aims to identify flooding and erosion changes along a semi-connected barrier island system due to varying bay water levels during storm conditions. The numerical model XBeach is used to simulate Hurricane Michael conditions and the resulting inundation and morphological change near Tyndall Air Force Base (Tyndall AFB). The installation is located 12 miles southeast of Panama City Beach along the panhandle of Florida and is vulnerable to flooding due to its proximity to the Gulf of Mexico (GoM), Saint Andrew Sound and Saint Andrew Bay. A land bridge connects the barrier island to the mainland of Tyndall AFB …

Iron Isotope Transformations In Saanich Inlet, Claire Onak

USF Tampa Graduate Theses and Dissertations

Iron (Fe) is required for many biogeochemical processes, with Fe bioavailability and chemistry being controlled by redox reactions that transform Fe between oxidation states and dissolved and particulate phases. In oxic seawater, Fe is present in the Fe(III) oxidation state, mainly as Fe oxyhydroxides. Under anoxic marine conditions, such as margin sediments under oxygen minimum zones or restricted basins with anoxic bottom water, Fe(III) is reduced to Fe(II), which is highly soluble and can be present at high concentrations ([Fe]). Fe isotope ratios (δ56Fe relative to IRMM-14) can be used to characterize Fe redox transformations, constrain Fe sources of Fe …

Ground Electric Field, Atmospheric Weather And Electric Grid Variations In Northeast Greece Influenced By The March 2012 Solar Activity And The Moderate To Intense Geomagnetic Storms, Georgios Anagnostopoulos, Anastasios Karkanis, Athanasios Kampatagis, Panagiotis Marhavilas, Sofia-Anna Menesidou, Dimitrios Efthymiadis, Stefanos Keskinis, Dimitar Ouzounov, Nick Hatzigeorgiu, Michael Danakis

Mathematics, Physics, and Computer Science Faculty Articles and Research

In a recent paper, we extended a previous study on the solar solar influence to the generation of the March 2012 heatwave in the northeastern USA. In the present study we check the possible relationship of solar activity with the early March 2012 bad weather in northeast Thrace, Greece. To this end, we examined data from various remote sensing instrumentation monitoring the Sun (SDO satellite), Interplanetary space (ACE satellite), the Earth’s magnetosphere (Earth-based measurements, NOAA-19 satellite), the top of the clouds (Terra and Aqua satellites), and the near ground atmosphere. Our comparative data analysis suggests that: (i) the winter-like weather …

Dissolved Nickel Speciation At The Bermuda Atlantic Time-Series Study (Bats) Site, Caitlyn E. Parente

USF Tampa Graduate Theses and Dissertations

Here I present the first depth profiles of dissolved nickel (DNi) speciation over an annual cycle at the Bermuda Atlantic Time-series Study (BATS) site in the North Atlantic. Seawater samples were collected in March, May, August, and November 2019 and analyzed for labile DNi using competitive ligand exchange-adsorptive cathodic stripping voltammetry (CLE-AdCSV). Labile DNi was measured by CLE-AdCSV as the fraction of DNi that exchanges with an added competitive ligand in an overnight equilibration. Results revealed two distinct fractions of DNi present throughout the water column: a labile fraction, and a strongly organically complexed (i.e., non-labile) fraction. More than 50% …

Sulfate Enhances The Adsorption And Retention Of Cu(Ii) And Zn(Ii) To Dispersed And Aggregated Iron Oxyhydroxide Nanoparticles, Emma M. Kocik, Abigail Kim, Miranda L. Aiken, Lauren Smith, Christopher S. Kim

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

The adsorption and retention of metal ions to nanoscale iron (hydr)oxides in aqueous systems is significantly influenced by prevailing environmental conditions. We examined the influence of sulfate, the second most common anion in seawater that is present in many other natural aquatic systems, on the adsorption and retention of Cu(II) and Zn(II) to synthetic iron oxyhydroxide nanoparticles (NPs) and their aggregates. Batch uptake experiments with monodisperse NPs and NPs aggregated by changes in pH, ionic strength, and temperature were conducted over sulfate concentrations ranging from 0 to 0.30 M. The introduction of 0.03 M sulfate significantly increased the initial adsorption …

Fretting Corrosion Wear Of Titanium-Based Alloy (Ti-6al-4v) In 0.9 Wt.% Nacl Solution, Chen-En Lu, Wen-Ken Li, Hung-Hua Sheu, Jeou-Long Lee, Hung-Bin Lee

Journal of Marine Science and Technology–Taiwan

In this study, a high precision fretting tribo-corrosion tester used to analyze the wear and corrosion behavior of Ti alloys in a fretting motion condition. The tester, operated in a ball-on-plate mode, was employed in the fretting corrosion study of metallic bio-materials (Ti and Ti-6Al-4V) under different loads (0 and 10 N), electrolytes (0.9 wt% NaCl and SBF) and fixed displacement frequency (1 Hz). Using profilometer, optical microscope in the experimental analysis and three-body mechanism in the theoretical analysis, the fretting corrosion performances of these bio-medical metals, such as velocity accommodation characteristics, friction, wear, and scratch profile were examined in …

A New-Type Deep Learning Model Based On Shapley Regulation For Containerized Freight Index Prediction, Yen-Chang Shih, Ming-Shue Lin, Taih-Cherng Lirn, Jih-Gau Juang

Journal of Marine Science and Technology–Taiwan

In this study, we have crafted an innovative methodology that represents a groundbreaking synthesis of deep learning techniques with cooperative game theory. In this study, we use the accuracy of data prediction by different LSTM models as a measurement index and assign different LSTM models corresponding weights through the Shapley value calculation method to construct a more accurate predictive analysis model. We use this improved Shapley regulation model to calibrate a long short-term memory (LSTM) neural network by using historical freight data to predict the China Container Freight Index (CCFI), the leading export container freight index commonly used in China. …

Applicability Of Reducing Valve Timing Overlap For Diesel Engines Under High Exhaust Back Pressure, Chien-Cheng Chen, Yuan-Liang Jeng, Shun-Chang Yen

Journal of Marine Science and Technology–Taiwan

The exhaust back pressure of diesel engines becomes increasing higher nowadays. As an example, the De-NOx system and DE-SOx system necessitated by the increasingly stringent emission standards, would result in increased exhaust back pressure for those diesel engines adopting such systems. Some ships adopt underwater exhaust system to save space on the working deck and to reduce noise and air pollution, while the hydrostatic pressure under water level has made the exhaust back pressure of diesel engines getting much higher. Under high exhaust back pressure, to keep discharging exhaust unhindered and operating smoothly for diesel engine, it often results in …

Elimination Of Noise In A Ship Cabin Using Multi-Layered Acoustic Boards: An Apso And Sa Approach, Min-Chie Chiu, Ho-Chih Cheng

Journal of Marine Science and Technology–Taiwan

A high level of noise, combined with pure tones, is often encountered in ship's cabins, leading to severe psychological and physiological issues for the crew. To address this problem, an indoor noise abatement solution becomes necessary that utilizes efficient acoustic boards integrated with resonators, positioned along the inner walls of the cabin. However, the thickness of the acoustic boards must be strictly limited due to maintenance and operational considerations. This limitation results in insufficient sound absorption capabilities and a restricted range of tuned frequencies, as the resonating frequency of a standard Helmholtz resonator is closely tied to its cavity. A …

Numerical Study On The Aerodynamic Performance Of Four Flettner Rotors By Varying Distance And Spin Ratio, Janghoon Seo, Dong-Woo Park

Journal of Marine Science and Technology–Taiwan

The Flettner rotor is a wind-assisted propulsion system applied in eco-friendly ship to reduce greenhouse gas emissions. As the requirements of international regulations on greenhouse gas emissions become increasingly strict, multiple Flettner rotors are being applied, necessitating the evaluation of their performance with varying design parameters. The present study focuses on the aerodynamic performances of four Flettner rotors with variable design parameters of distance and spin ratio. Distances and spin ratios, including relative spin ratios, are considered. The drag and lift coefficients and lift-to-drag ratio of Flettner rotors are determined using Computational Fluid Dynamics (CFD), and the associated flow fields …

Underwater Image Enhancement Algorithm For Dual Color Spaces, Xingsheng Shen, Yalin Song, Shichang Li, Xiaoshu Hu

Journal of Marine Science and Technology–Taiwan

Targeting issues related to low contrast, blurring, and loss of detail prevalent in underwater image enhancement algorithms, we propose a dual-color space multiscale residual network (DMR-SCNet) based on SCNet. First, we introduce the HSV color space feature extraction module, which aims to optimize the color representation and saturation of underwater images. Subsequently, we propose the RGB color space denoising module, which focuses on repairing the content and structure of underwater images to enhance their clarity and visual quality. Finally, by designing the residual attention (RAB) module, we aim to further refine the detailed representation and feature extraction of underwater images. …

A Novel Identity Authentication Mechanism For Unmanned Maritime Vessels Communication Based On Mitre Att&Ck Framework, Junxian He, Shih-Hao Chang

Journal of Marine Science and Technology–Taiwan

With the development of the smart shipping industry, unmanned vessel technology is rapidly evolving, accompanied by a demand for robust Internet of Things (IoT) communication security practices. Key communication technologies for the operation of unmanned vessels include external vessel communication. One crucial aspect is the verification of the identities of the parties involved in these communication systems, as this ensures secure and trusted interactions between unmanned vessels and port management authorities. Identity authentication plays a vital role in ensuring the secure communication of unmanned vessels.This paper aims to analyze potential risks related to identity authentication technology in unmanned vessel communication …

Corrigendum To “Applicability Of Reducing Valve Timing Overlap For Diesel Engines Under High Exhaust Back Pressure”

Journal of Marine Science and Technology–Taiwan

No abstract provided.

Distribution And Population Structure Of Corallivorous Drupella Snails In The Coral Reefs Of Kenting In Taiwan, Chih-Jui Tan, Dun-Ru Kang, Li-Lian Liu

Journal of Marine Science and Technology–Taiwan

The corallivorous Drupella snails are common predators of living hard corals in the Indo-Pacific Ocean, and they can significantly threaten coral reef ecosystems when outbreaks occur. In Taiwan, a Drupella outbreak, which resulted in the dramatic decline of Acropora and Montipora corals, was reported in Penghu in 2002 – 2009. However, the Drupella species involved was not identified, and no further research has been conducted. To obtain current knowledge on the predation pressure of corallivorous snails on hard corals, we investigated benthic communities and the distribution and population structure of Drupella snails in the coral reefs of Kenting, Taiwan. The …

Evaluating The Connectivity Reliability Of The Seaborne Transportation Network Using Uncertainty Theory, Tianshou Liu, Haiyang Bian, Lin Feng, Chenyang Fan, Chaojun Ding, Grifoll Manel, Hongxiang Feng

Journal of Marine Science and Technology–Taiwan

The shipping network serves as the backbone of international trade. However, due to unstable geopolitical conditions, unexpected events have occurred frequently in recent years that have impacted the global shipping supply chain, and this has placed enormous pressure and had adverse effects on seaborne transportation. To measure the reliability of the global shipping network under unexpected events, we abstract the global shipping network into a small world network using uncertainty theory. A method is proposed for selecting (i) the optimal reliable path and (ii) the optimal reliable path with a maximum measurement under different confidence intervals. Our approach is then …