Oceanography Commons^™

Flow Structure And Mixing Near A Small River Plume Front: Winyah Bay, Sc, Usa, Christopher Papageorgiou, George Voulgaris, Alexander E. Yankovsky, Diane Bennett Fribance

Faculty Publications

This study presents Eulerian data from Winyah Bay, SC, USA collected during the passage of a tidal plume. The data captured the evolution and structure of the plume and include high-resolution velocity and temperature time series, supplemented by temperature – salinity profiles from a MicroCTD profiler. The observations identified a pre-existing plume extending to 4 m, with a water density of 1023.6 kg m⁻³, laying above denser ambient waters. Upon arrival, the newly discharged tidal plume introduced a fresher layer (1020.7 kg m⁻³) extending to 2.6 m, gradually thinning due to radial spreading. The plume's frontal …

Flow Structure And Mixing Near A Small River Plume Front: Winyah Bay, Sc, Usa, Christopher Papageorgiou, George Voulgaris, Alexander E. Yankovsky, Diane Bennett Fribance

Faculty Publications

This study presents Eulerian data from Winyah Bay, SC, USA collected during the passage of a tidal plume. The data captured the evolution and structure of the plume and include high-resolution velocity and temperature time series, supplemented by temperature – salinity profiles from a MicroCTD profiler. The observations identified a pre-existing plume extending to 4 m, with a water density of 1023.6 kg m⁻³, laying above denser ambient waters. Upon arrival, the newly discharged tidal plume introduced a fresher layer (1020.7 kg m⁻³) extending to 2.6 m, gradually thinning due to radial spreading. The plume's frontal …

Interactions And Community Structure Of Fungi And Prokaryotes In Salt And Brackish Marsh Ecosystems, Madeleine A. Thompso, Xuefeng Peng

Faculty Publications

Microbial communities play a fundamental role in biogeochemical cycling within salt and brackish marsh ecosystems, yet fungal-prokaryotic interactions in these environments remain poorly understood. This study employed metabarcoding of the 16S and 28S rRNA genes to investigate prokaryotic and fungal communities across four locations in sediments and surface waters of the North Inlet salt marsh and Winyah Bay brackish marsh (South Carolina, USA) over four time points from 2020 to 2021. Co-occurrence network analyses were used to identify potential microbial interactions and their ecological implications. Distinct fungal and prokaryotic communities were observed between the two marsh types. From the 16S …

Decreasing Foraminiferal Flux In Response To Ongoing Climate Change In The Santa Barbara Basin, California, Emily Harvard, Katherine Cherry, Claudia R. Benitez-Nelson, Eric Tappa, Catherine V. Davis

Faculty Publications

The rapid response of foraminiferal assemblages to changing climate makes their shells an invaluable geological record of the past. However, the time frame over which foraminifera respond to climatic signals and the specific drivers influencing assemblage composition and abundance remain obscure. We focus on the impact of ongoing, anthropogenic climate change on planktic foraminifera in the California Current ecosystem, which would appear as a nearly instantaneous event in the sediment record. The Santa Barbara Basin sediment trap, located off the coast of California, USA since 1993, provides a record of more than 30 years of particulate and foraminiferal flux in …

Topological And Information-Theoretic Analysis Of Climate-Driven Indonesian Throughflow Dynamics, Sandy H. S. Herho, Katarina E.P. Herho, Iwan P. Anwar, Rusmawan Suwarman

Northeast Journal of Complex Systems (NEJCS)

The Indonesian Throughflow (ITF) represents the sole tropical pathway connecting Pacific and Indian Oceans, yet quantitative understanding of climate mode influences on its variability remains incomplete. We applied information-theoretic and topological frameworks to analyze 34 years (1984-2017) of observational ITF transport data alongside ENSO and IOD indices. Bootstrap analysis revealed pronounced ITF seasonality with 13.28 Sv amplitude peaking in September, contrasting with negligible climate index annual cycles, indicating scale separation in forcing mechanisms. Multi-method extrema detection identified 36-41 extreme events per variable, with 23.1% coincidence between ENSO and IOD high extrema confirming known co-occurrence patterns. Ensemble information-theoretic metrics demonstrated ENSO …

Ocean And Coastal Acidification Monitoring Priorities For The Northeast Us And Eastern Canada, Christopher Hunt, Austin Pugh, Jake Kritzer, Samantha Siedlecki, Kumiko Azetsu-Scott, Parker Gassett, Diane Lavoie, Adam Pimenta, Amy Trice, Elizabeth Turner

Faculty Publications

The Interagency Working Group on Ocean Acidification Monitoring Prioritization Plan 2024 calls for Coastal Acidification Networks to identify the ocean and coastal acidification (OCA) monitoring needs most important for their regions. The Northeast Coastal Acidification Network (NECAN) organized a webinar series to study regional needs, which culminated with a workshop in November 2023. This workshop led to the identification of six priority new Monitoring Needs in addition to the maintenance of current monitoring efforts:

• Improve spatial and temporal scale of monitoring co-located OCA variables and biological measurements to better resolve variability of acidification dynamics in concert with biological processes …

The Effects Of Varying Temperatures And Food Availability On The Reproductive Output Of The Acorn Barnacle: Chthamalus Fissus, Karina L. Rog

McNair Summer Research Program

Climate change is predicted to intensify ocean warming and the reduction in phytoplankton abundance, potentially disrupting reproductive processes in filter-feeding intertidal invertebrates. This study investigated the combined effects of water temperature increases and food availability on the reproductive output on Chthamalus fissus, a dominant intertidal barnacle species found along the Southern California coastline. Using a controlled laboratory experiment, adult barnacles collected from the nearshore rocky intertidal habitat in La Jolla, California, were exposed to two temperature regimes (ambient water temperature ~ 18°C and elevated water temperature ~ 20-21°C) and two food concentration treatments (low and high phytoplankton and rotifer …

A 12,800-Year-Old Layer With Cometary Dust, Microspherules, And Platinum Anomaly Recorded In Multiple Cores From Baffin Bay, Christopher R. Moore, Vladimir A. Tselmovich, Malcolm A. Lecompte, Allen West, Stephen J. Culver, David J. Mallinson, Mohammed Baalousha M.Sc, Ph.D., James P. Kennett, William M. Napier, Michael Bizimis, Victor Adedeji, Seth R. Sutton, Gunther Kleteschka, Kurt A. Langworthy, Jesus P. Perez, Timothy Witwer, Marc D. Young, Jordan Jeffreys, Richard C. Greenwood, James A. Malley

Faculty Publications

The Younger Dryas Impact Hypothesis (YDIH) posits that ~12,800 years ago Earth encountered the debris stream of a disintegrating comet, triggering hemisphere-wide airbursts, atmospheric dust loading, and the deposition of a distinctive suite of extraterrestrial (ET) impact proxies at the Younger Dryas Boundary (YDB). Until now, evidence supporting this hypothesis has come only from terrestrial sediment and ice-core records. Here we report the first discovery of similar impact-related proxies in ocean sediments from four marine cores in Baffin Bay that span the YDB layer at water depths of 0.5–2.4 km, minimizing the potential for modern contamination. Using scanning electron microscopy …

Expanded Genetic And Functional Diversity Of Oceanic Fungi, Xuefeng Peng, David L. Valentine

Faculty Publications

Background

Fungi are known members of marine microbiomes that can act as saprotrophs, parasites, and pathogens. Although a few studies utilizing cultivation-based methods and metabarcoding have been conducted, the diversity, ecological roles, and functional activities of fungi in the open ocean remain vastly underexplored. This gap in knowledge is particularly notable in oxygen minimum zones (OMZ) of the ocean, which have expanded over the past 50 years, affecting marine ecosystems and biogeochemical cycles. The eastern tropical North Pacific Ocean (ETNP) is the largest oxygen minimum zone where fungi have been implicated in the production of the potent greenhouse gas nitrous …

Improving Coastal Hydrodynamic Model Performance Through Parameter Sensitivity Analysis And Optimization, Sunni Siqueira Allen

LSU New Orleans Theses and Dissertations

This thesis presents a framework for parameter sensitivity analysis and optimization of coastal hydrodynamic models. The research uses the Generalized Likelihood Uncertainty Estimation (GLUE) method to quantify parameter sensitivity and identify optimal values for currents, wave height, and water level. A variance-based technique guides parameter selection when GLUE yields competing values or when observations are unavailable.

The framework is demonstrated through two case studies: Hurricane Michael (2018) and the ExCaliBur field study (2022) near Oceanside, CA. Results from Hurricane Michael show higher optimal hydrodynamic model bottom friction values near the hurricane's landfall location. The Oceanside study identifies the hydrodynamic model's …

Assessment Of Estuarine Respiration And Benthic Nutrient Fluxes In Mississippi Sound, Nur Pasha Sufian

Master's Theses

This study quantified seasonal and spatial variability of both water column and benthic respiration rates as well as benthic nutrient fluxes along the Mississippi Sound. Respiration was measured in recirculating incubation chambers using Firesting optical DO sensors (PyroScience GmbH), and changes in nutrient concentrations were assessed. Mean water column respiration rates ranged from 0.35 and 2.76 µM O₂ hr⁻¹, with the lowest rates in the winter and the highest in the summer while detectable nutrient concentrations (ammonium, (NH₄⁺), and soluble reactive phosphate (PO₄³⁻)) showed only slight decreases (< 1 µM) over all seasons. Sediment incubation chambers consistently had much greater oxygen declines than the water incubations and showed seasonal trends with the highest mean respiration rates measured in the summer and the lowest mean in the winter, with a range from 107.4 to 1514.9 µmol O₂ m⁻² hr⁻¹ (2.6 to 36.3 mmol O₂ m⁻² d⁻¹). Sediment incubations consistently showed increases in NH₄⁺ concentrations in the overlying water, resulting in calculated NH₄⁺ benthic flux rates of 0.73 to 379.01 µM N m⁻² hr⁻¹ with the lowest rates in the winter and highest rates in the summer. Although PO₄³⁻ concentrations were often below detection in cooler seasons, PO₄³⁻ flux also peaked during the summer (< 28.8 µmol P m⁻² hr⁻¹). In this study, temperature was a key regulator for estuarine respiration and benthic nutrient flux rates, and these rates were positively correlated with porewater nutrient concentrations and sedimentary organic matter. These findings illustrate that benthic respiration can contribute to water column hypoxia and that sediments serve as a source of nutrients to the water column. Overall, these findings provide us with valuable insight about the seasonal coupling of oxygen demand and nutrient flux in the Mississippi Sound and provide valuable baseline data for future biogeochemical modelling of hypoxia, eutrophication, and productivity.

Enhanced Point Cloud Generation From A Novel 360° Underwater Lidar, Olagoke E. Daramola

Dissertations

This dissertation presents novel algorithms to improve the mapping capabilities of a 360-degree underwater Pulsed Laser Line Scanner LiDAR (PLLS-360°). Due to its 360° field-of-view (FOV), the PLLS-360° is a compact full-waveform omnidirectional imager suitable for seafloor mapping, underwater asset inspection, object detection, ice-sheet mapping, and construction progress monitoring. The proposed methodology includes an improved waveform fitting technique for saturated waveform recovery, detection array response correction, radiometric corrections, and fusion of LiDAR and sonar bathymetric datasets. The first part of this dissertation assesses the LiDAR’s performance and describes how the data for this unique 360° FOV architecture is processed. The …

Comparison Of Nutrient Concentrations And Primary Production Indicators Across Plume Fronts, Taylor Dishon

Electronic Theses and Dissertations

Coastal buoyant plumes carry low-salinity waters containing particulate and dissolved terrestrial materials with an abundance of nutrients into the coastal ocean, including inorganic nitrogen and phosphorous. Plume fronts act as transport barriers created from the convergence of a fresher plume with an older, saltier plume or with ambient waters, leading to potential accumulation of phytoplankton and nutrients. This accumulation creates an optimal environment for primary production. The primary goals of this study were: to investigate the distribution of and potential relationships between nutrient concentrations and chlorophyll a across plume fronts of the Winyah Bay River Plume, and examine potential relationships …

The Influence Of Monsoon Variability On The Circulation Of The Near-Surface Indian Ocean And The Depth-Integrated Chlorophyll, Marufa Ishaque

OES Theses and Dissertations

The Indian Ocean experiences a strong semiannual reversal of monsoon winds, which determines the weather and climate of Asia, including freshwater fluxes between the atmosphere, land, and ocean. Studies and model projections suggest that the timing and intensity of the seasonal monsoon have already started to change, with more dramatic changes likely in the future. However, the impact of these changes on the Indian Ocean circulation system, including the inter-basin salt/freshwater transport between the Bay of Bengal and the Arabian Sea, remains unclear. To better understand how monsoon variability affects Indian Ocean circulation patterns, a Regional Ocean Modeling System simulation …

Atmospheric Teleconnection Patterns And Hydrological Whiplashes In The Western U.S., Wenzhao Li, Surendra Maharjan, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

The Western U.S. is undergoing notable transformations in its hydrological patterns, distinguished by rising variability and recurrent “whiplash” shifts between extreme wet and dry phases. Our comprehensive analysis of 469 streamflow stations from 1981 to 2023 reveals a substantial increase in hydrological whiplash events, with a peak of 206 stations experiencing dry-to-wet whiplash in the early 1990s. We establish strong links between these streamflow extremes and sub-seasonal to seasonal teleconnection factors, particularly the Western Pacific Oscillation (WP) and Eastern Pacific/North Pacific Oscillation (EPO). Additionally, we demonstrate the combined impacts of the El Niño-Southern Oscillation (ENSO) and the Madden-Julian Oscillation (MJO), …

Using Radium Isotopes To Compare Nutrient Inputs Via Submarine Groundwater Discharge To Offshore Export On The West Florida Shelf, Andrew L. Lindgren

OES Theses and Dissertations

Radium isotopes have been used to trace submarine groundwater discharge (SGD) and associated nutrient and metal inputs into the coastal ocean. They have also been used to estimate rates of diffusive mixing and export fluxes of dissolved constituents offshore. However, use of both approaches in tandem to determine the fate of groundwater inputs after they enter the coastal ocean is still relatively unexplored. Radium isotopes and nutrients were measured in two cross-shelf cruises on the West Florida Shelf in different seasons and in quarterly sampling of offshore wells. Through 226Ra mass balance and 223Ra-derived diffusive mixing rates, inputs of nutrients …

How’S It Growing? Tools For Observing Snow And Sea Ice In A Changing Arctic Ocean, Ian Alexander Raphael

Dartmouth College Ph.D Dissertations

September Arctic sea ice extent has diminished by roughly 50% in the 45 years since satellite observations began. The Arctic Ocean may experience ice-free summers within the next decade, with implications for habitat, resource extraction, geopolitics, and local and global climate change. To predict how Arctic sea ice will change in the future, we need to understand its behavior in the present. In situ sea ice mass balance measurements (snow accumulation, ice growth, snow and ice surface melt, and bottom melt) are essential for studying the processes driving rapid changes in the ice pack, and for validating remote sensing measurements …

Land Instability Compounds The Risk Of Sea Level Rise In Alexandria, Egypt, Rejoice Thomas, Sara Zouriq, Shahryar Fazli, Amr Fawzy, Nikolay Grisel Todorov, Surendra Maharjan, Wenzhao Li, Erik Linstead, Daniele Struppa, Hesham El-Askary

Mathematics, Physics, and Computer Science Faculty Articles and Research

The coastal region of Alexandria Governorate in Egypt holds significant strategic importance for trade while being susceptible to extreme weather events. It confronts a dual challenge of the rising sea levels and, as found in this study, land instability. While much attention has been rightly directed towards sea level rise (SLR), the stability of the land warrants equal consideration. Here, a comprehensive analysis of land stability is conducted in Alexandria by measuring Line of Sight (LOS) displacements and assessing their topographical, hydrological, and coastal impacts. Persistent Scatterer Interferometry technique is used to measure the LOS displacements in association with land …

Filling Gaps In Scientific Data Sets Using Physics Informed Neural Networks: A Case Study In Velocity Fields, Ellen Saunders

Master's Theses

Gaps in scientific data sets are a persistent issue for researchers in a variety of fields, and while nothing makes up for missing out on real data, well-simulated synthetic data can be a useful tool. In the world of image processing, machine learning techniques have become quite sophisticated at taking an image with a missing component and filling in that space with something believable. The aim of this thesis is to take machine learning techniques similar to what gets used in image processing and repurpose them to infill gaps in scientific data sets in a realistic manner. This thesis compares …

Vertical And Latitudinal Variability Of Marine Heatwaves In The California Current, Gavin M. Plume

Master's Theses

Marine heatwaves (MHWs) are increasing in frequency and intensity globally, with grave effects on marine ecosystems and their dependent industries. There are significant gaps in knowledge of the subsurface behavior and geographic distribution of MHWs, especially in eastern boundary upwelling systems like the California Current. Here, two decades of full water-column temperature observations from a shallow autonomous profiler in San Luis Obispo Bay (~10m) revealed that while MHWs have similar average durations and intensities across all depths, one-third of bottom MHWs occur without a concurrent surface signal. MHWs across the water column initiated during anomalously weak upwelling or downwelling conditions …