Oceanography Commons^™

The Conservation Status Of Marine Biodiversity Of The Western Indian Ocean, R. Bullock, Gina Ralph, E. Stump, F. Al Abdali, J. Al Asfoor, B. Al Buwaiqi, A. Al Kindi, A. Ambuali, Tiffany Birge, P. Borsa, F. Di Dario, B. Everett, S. Fennessy, C. Fonseca, Claire Gorman, A. Govender, H. Ho, W. Holleman, N. Jiddawi, M. Khan, H. Larson, Christi Linardich, P. Matiku, K. Matsuura, C. Maunde, H. Motomura, T. Munroe, R. Nair, C. Obota, B. Polidoro, B. Russell, S. Shaheen, Y. Sithole, W. Smith-Vaniz, F. Uiblein, S. Weerts, A. Williams, S. Yahya, Kent Carpenter

Biological Sciences Faculty Publications

The Western Indian Ocean (WIO) is comprised of productive and highly diverse marine ecosystems that are rich sources of food security, livelihoods, and natural wonder. The ecological services that species provide are vital to the productivity of these ecosystems and healthy biodiversity is essential for the continued support of economies and local users. The stability of these valuable resources, however, is being eroded by growing threats to marine life from overexploitation, habitat degradation and climate change, all of which are causing serious reductions in marine ecosystem services and the ability of these ecosystems to support human communities. Quantifying the impacts …

Effects Of Tidal Flooding On Estuarine Biogeochemistry: Quantifying Flood-Driven Nitrogen Inputs In An Urban, Lower Chesapeake Bay Sub-Tributary, Alfonso Macías-Tapia, Margaret R. Mulholland, Corday R. Selden, J. Derek Loftis, Peter W. Bernhardt

OES Faculty Publications

Sea level rise has increased the frequency of tidal flooding even without accompanying precipitation in many coastal areas worldwide. As the tide rises, inundates the landscape, and then recedes, it can transport organic and inorganic matter between terrestrial systems and adjacent aquatic environments. However, the chemical and biological effects of tidal flooding on urban estuarine systems remain poorly constrained. Here, we provide the first extensive quantification of floodwater nutrient concentrations during a tidal flooding event and estimate the nitrogen (N) loading to the Lafayette River, an urban tidal sub-tributary of the lower Chesapeake Bay (USA). To enable the scale of …

Factors Determining Seagrass Blue Carbon Across Bioregions And Geomorphologies, Ines Mazarrasa, Paul Lavery, Carlos M. Duarte, Anna Lafratta, Catherine E. Lovelock, Peter I. Macreadie, Jimena Samper-Villarreal, Cristian Salinas, Christian J. Sanders, Stacey Trevathan-Tackett, Mary Young, Andy Steven, Oscar Serrano

Research outputs 2014 to 2021

Seagrass meadows rank among the most significant organic carbon (C_org) sinks on earth. We examined the variability in seagrass soil C_org stocks and composition across Australia and identified the main drivers of variability, applying a spatially hierarchical approach that incorporates bioregions and geomorphic settings. Top 30 cm soil C_org stocks were similar across bioregions and geomorphic settings (min-max: 20–26 Mg C_org ha⁻¹), but meadows formed by large species (i.e., Amphibolis spp. and Posidonia spp.) showed higher stocks (24–29 Mg C_org ha⁻¹) than those formed by smaller species (e.g., Halodule, Halophila, …

Global Ocean Change Ocg 511, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Marine Geobiology Ocg 502, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Early Life History Of Tarpon (Megalops Atlanticus) In South Carolina Estuaries: Assessment Of Juvenile Recruitment And Validity Of Aging And Back-Calculation Methods, Garrett M. Elmo

Electronic Theses and Dissertations

No abstract provided.

Parametric Model Development For Heterogeneous Atmospheric Conditions, Daniel Paul Greenway

Electronic Theses and Dissertations

No abstract provided.

Cost-Effective Gnss Hardware For High-Accuracy Surveys And Its Prospects For Post-Processed Kinematic (Ppk) And Precise Point Positioning (Ppp) Strategies, Johnson Olusegun Oguntuase

Dissertations

This dissertation determines for the first time the vertical accuracy achievable with low-cost mass-market multi-frequency, multi-GNSS (LM3GNSS) receivers, and antennas in the context of Ellipsoid Reference Survey (ERS), usually employed in bathymetric operations aboard survey platforms. LM3GNSS receivers are relatively new in the market, and their emergence is driven by the automobile industry and several mass-market applications requiring location-based solutions at high accuracies. It is foreseeable that emerging hydrographic survey platforms such as autonomous surface vehicles, small unmanned aircraft, crowd-sourced bathymetric platforms, and offshore GNSS buoy will find LM3GNSS receivers attractive since they are power- and cost-effective (often less than …

Seasonal Variability Of Upwelling And Downwelling Surface Current Patterns Near A Small Coastal Embayment, Nicholas Trautman

Physics

Upwelling in coastal embayments is important to a variety of physical and biological processes. Despite their ubiquity, circulation patterns in small bays (width and length scales ≤ 20 km) in eastern boundary current upwelling systems are relatively understudied compared to their larger counterparts. In this study, we apply a conditional averaging technique to investigate upwelling- and downwelling-driven circulation in a small coastal embayment located in Central California [San Luis Obispo (SLO) Bay]. We also investigate intraseasonal differences in the current patterns in SLO Bay. Conditional averaging reveals distinct intraseasonal differences and features that are obscured by traditional seasonal averages when …

In The Margins: Reconsidering The Range And Contribution Of Diazotrophs In Nearshore Environments, Corday R. Selden

OES Theses and Dissertations

Dinitrogen (N₂) fixation enables primary production and, consequently, carbon dioxide drawdown in nitrogen (N) limited marine systems, exerting a powerful influence over the coupled carbon and N cycles. Our understanding of the environmental factors regulating its distribution and magnitude are largely based on the range and sensitivity of one genus, Trichodesmium. However, recent work suggests that the niche preferences of distinct diazotrophic (N₂ fixing) clades differ due to their metabolic and ecological diversity, hampering efforts to close the N budget and model N₂ fixation accurately. Here, I explore the range of N₂ fixation …

Open Data, Collaborative Working Platforms, And Interdisciplinary Collaboration: Building An Early Career Scientist Community Of Practice To Leverage Ocean Observatories Initiative Data To Address Critical Questions In Marine Science, Robert M. Levine, Kristen E. Fogaren, Johna E. Rudzin, Christopher J. Russoniello, Dax C. Soule, Justine M. Whitaker

Publications and Research

Ocean observing systems are well-recognized as platforms for long-term monitoring of near-shore and remote locations in the global ocean. High-quality observatory data is freely available and accessible to all members of the global oceanographic community—a democratization of data that is particularly useful for early career scientists (ECS), enabling ECS to conduct research independent of traditional funding models or access to laboratory and field equipment. The concurrent collection of distinct data types with relevance for oceanographic disciplines including physics, chemistry, biology, and geology yields a unique incubator for cutting-edge, timely, interdisciplinary research. These data are both an opportunity and an incentive …

Monitoring 2019 Bonnet Carré Spillway Impacts - Final Report, J. Read Hendon, Jerry D. Wiggert, Jill Hendon

Faculty Publications

Due to the multiple and extended openings of the Bonnet Carré Spillway in 2019, the University of Southern Mississippi (USM) was tasked by the Mississippi Department of Marine Resources to conduct ecological sampling in the Mississippi Sound and adjacent waters. in an effort to better understand the impacts of the extensive freshwater diversion of Bonnet Carré Spillway operations on Mississippi's coastal and marine resources. The period of performance for this project was June 1, 2019, to August 31, 2019. This technical report summarizes the three months of weekly surveys and analyses, over June - August 2019, conducted by the University …

Neogene And Quaternary Events Shaped Diversification And Speciation In Bhutanese Rheophilic Fishes Of The Family Nemacheilidae (Cypriniformes) And Sisoridae (Siluriformes), Karma Wangchuk

Graduate Theses and Dissertations

Biogeography of the Himalayan region [to include the Qinghai-Tibetan Plateau (QTP)] evolved over a ~30M year span, catalyzed by the collision of the Indian and Eurasian plates. The resulting uplift produced major ecological and climatic effects, that in turn drove the diversification of biodiversity. As a result, the QTP is designated as a global biodiversity hotspot particularly vulnerable to cumulative climatic effects, including shrinking distributions, declining numbers, and local extinctions. Understanding how the biodiversity within the Himalaya/ QTP was established and maintained is a necessary first step in prioritizing conservation efforts.

Fishes in global montane regions, such as the Himalaya, …

Assessing The Recalibration Interval For Nearshore Sediment Assemblages After Hurricane Irma: Implications For Developing Long-Term Records Of Overwash Deposits, Stephen Mitchell

Master's Theses

Surface distributions are commonly collected to assist with overwash interpretation; however, many of these are first established immediately after a major overwash event as part of a post-event field survey. This study documents the impacts of Hurricane Irma, a Category 5 storm, on nearshore sediments off the coast of Anegada (British Virgin Islands) using distributions of Homotrema rubra, an encrusting foraminifer with a defined provenance in coral reef ecosystems. Over four sampling intervals spanning 2 years, from six months pre-Hurricane Irma to 18 months post-Hurricane Irma, surface sediment was collected from three shore-perpendicular transects on both the northern and …

Sediment Oxygen Demand And Stoichiometry Of Irl Nutrient Fluxes, Iulia Bibire

Theses and Dissertations

Eutrophication of coastal systems has become a prominent global issue with a variety of detrimental effects, one of these being the shift in the composition of phytoplankton communities often promoting harmful algal blooms (HABs) resulting at least partially from changes to the relative abundance of N:P:Si. This study investigated nutrient fluxes from muck, a fine-grained and organic-rich sediment, and from sand to determine the importance of these sediments with regards to regulating N:P ratios in the water column. Overall sediment oxygen demand (SOD) was used as an indicator of aerobic decomposition and was found to decrease from north to south …

Potential Virus-Mediated Nitrogen Cycling In Oxygen-Depleted Oceanic Waters, M. Consuelo Gazitúa, Dean R. Vik, Simon Roux, Ann C. Gregory, Benjamin Bolduc, Brittany Widner, Margaret R. Mulholland, Steven J. Hallam, Osvaldo Ulloa, Matthew B. Sullivan

OES Faculty Publications

Viruses play an important role in the ecology and biogeochemistry of marine ecosystems. Beyond mortality and gene transfer, viruses can reprogram microbial metabolism during infection by expressing auxiliary metabolic genes (AMGs) involved in photosynthesis, central carbon metabolism, and nutrient cycling. While previous studies have focused on AMG diversity in the sunlit and dark ocean, less is known about the role of viruses in shaping metabolic networks along redox gradients associated with marine oxygen minimum zones (OMZs). Here, we analyzed relatively quantitative viral metagenomic datasets that profiled the oxygen gradient across Eastern Tropical South Pacific (ETSP) OMZ waters, assessing whether OMZ …

Under-Ice Phytoplankton Blooms: Shedding Light On The "Invisible" Part Of Arctic Primary Production, Mathieu Ardyna, C. J. Mundy, Nicolas Mayot, Lisa C. Matthes, Laurent Oziel, Christopher Horvat, Eva Leu, Philipp Assmy, Victoria Hill, Patricia A. Matrai, Matthew Gale, Igor A. Melnikov, Kevin R. Arrigo

OES Faculty Publications

The growth of phytoplankton at high latitudes was generally thought to begin in open waters of the marginal ice zone once the highly reflective sea ice retreats in spring, solar elevation increases, and surface waters become stratified by the addition of sea-ice melt water. In fact, virtually all recent large-scale estimates of primary production in the Arctic Ocean (AO) assume that phytoplankton production in the water column under sea ice is negligible. However, over the past two decades, an emerging literature showing significant under-ice phytoplankton production on a pan-Arctic scale has challenged our paradigms of Arctic phytoplankton ecology and phenology. …

Anthropogenic Change On The Distribution Of Marine Megafauna And Their Prey, Baylie Fadool

Honors Program: Senior Projects (Public)

Anthropogenic change is impacting the distribution and survival of marine megafauna and their prey. Humans are changing every aspect of the marine environment, with effects reaching as large as changing the composition of marine environments to directly overexploiting species through the fishing industry. The role that marine megafauna play in balancing ecosystems, including as top apex predators, leads to detrimental results in the absences and population declines of these species. Migrations and declines due to threats on marine apex predator species will alter their environments by causing mesopredator release and changes in community structure, which is often associated with reduced …

Odu Professor Co-Authors Study Of The Sources Of Sea Level Rise Since 1900, Tiffany Whitfield

News Items

No abstract provided.

Escolar (Lepidocybium Flavobrunneum) Neurocranium, Meredith M. Pratt, Katerina D. Sawickij, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium prep of escolar Lepidocybium flavobrunneum obtained from longlining vessel.