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The Pelvic Flexure Separates Distinct Microbial Communities In The Equine Hindgut, Kailee J. Reed, Isabelle G. Z. Kunz, Jessica A. Scare, Martin K. Nielsen, Philip J. Turk, Robert J. Coleman, Stephen J. Coleman 2021 Colorado State University

The Pelvic Flexure Separates Distinct Microbial Communities In The Equine Hindgut, Kailee J. Reed, Isabelle G. Z. Kunz, Jessica A. Scare, Martin K. Nielsen, Philip J. Turk, Robert J. Coleman, Stephen J. Coleman

Maxwell H. Gluck Equine Research Center Faculty Publications

As hindgut fermenters, horses are especially dependent on the microbiota residing in their cecum and large intestines. Interactions between these microbial populations and the horse are critical for maintaining gut homeostasis, which supports proper digestion. The current project was motivated to determine if any features of the fecal microbiota are informative of the microbial communities from the cecum, ventral colon, or dorsal colon. Digesta from the cecum, ventral colon, dorsal colon and feces were collected from 6 yearling miniature horses. Microbial DNA was isolated and the microbiota from each sample was characterized by profiling the V4 region of the 16S …


Genomic Comparisons Of Persian Kurdish, Persian Arabian And American Thoroughbred Horse Populations, Navid Yousefi-Mashouf, Hassan Mehrabani-Yeganeh, Ardeshir Nejati-Javaremi, Ernest Bailey, Jessica L. Petersen 2021 University of Kentucky

Genomic Comparisons Of Persian Kurdish, Persian Arabian And American Thoroughbred Horse Populations, Navid Yousefi-Mashouf, Hassan Mehrabani-Yeganeh, Ardeshir Nejati-Javaremi, Ernest Bailey, Jessica L. Petersen

Maxwell H. Gluck Equine Research Center Faculty Publications

The present research aimed to characterize the Persian Kurdish horse population relative to the Persian Arabian and American Thoroughbred populations using genome-wide SNP data. Fifty-eight Kurdish, 38 Persian Arabian and 83 Thoroughbred horses were genotyped across 670,796 markers. After quality control and pruning to eliminate linkage disequilibrium between loci which resulted in 13,554 SNPs in 52 Kurdish, 24 Persian Arabian and 58 Thoroughbred horses, the Kurdish horses were generally distinguished from the Persian Arabian samples by Principal Component Analyses, cluster analyses and calculation of pairwise FST. Both Persian breeds were discriminated from the Thoroughbred. Pairwise FST between …


Piglet Immunization With A Spike Subunit Vaccine Enhances Disease By Porcine Epidemic Diarrhea Virus, Jieshi Yu, Chithra Sreenivasan, Tirth Uprety, Rongyuan Gao, Chen Huang, Ella J. Lee, Steven Lawson, Julie Nelson, Jane Christopher-Hennings, Radhey S. Kaushik, Eric Nelson, Diego G. Diel, Ben M. Hause, Feng Li, Dan Wang 2021 University of Kentucky

Piglet Immunization With A Spike Subunit Vaccine Enhances Disease By Porcine Epidemic Diarrhea Virus, Jieshi Yu, Chithra Sreenivasan, Tirth Uprety, Rongyuan Gao, Chen Huang, Ella J. Lee, Steven Lawson, Julie Nelson, Jane Christopher-Hennings, Radhey S. Kaushik, Eric Nelson, Diego G. Diel, Ben M. Hause, Feng Li, Dan Wang

Maxwell H. Gluck Equine Research Center Faculty Publications

Immunization with an insect cell lysate/baculovirus mixture containing recombinant porcine epidemic diarrhea virus (PEDV) spike protein induced high levels of neutralizing antibodies in both mice and piglets. However, immunization of piglets with this vaccine resulted in enhancement of disease symptoms and virus replication in vaccine recipients exposed to PEDV challenge. Thus, these observations demonstrate a previously unrecognized challenge of PEDV vaccine research, which has important implications for coronavirus vaccine development.


Investigation Of Equine In Vivo And In Vitro Derived Metabolites Of The Selective Androgen Receptor Modulator (Sarm) Acp-105 For Improved Doping Control, Malin Nilsson Broberg, Heather Knych, Ulf Bondesson, Curt Pettersson, Scott Stanley, Mario Thevis, Mikael Hedeland 2021 Uppsala University, Sweden

Investigation Of Equine In Vivo And In Vitro Derived Metabolites Of The Selective Androgen Receptor Modulator (Sarm) Acp-105 For Improved Doping Control, Malin Nilsson Broberg, Heather Knych, Ulf Bondesson, Curt Pettersson, Scott Stanley, Mario Thevis, Mikael Hedeland

Maxwell H. Gluck Equine Research Center Faculty Publications

Selective Androgen Receptor Modulators (SARMs) have anabolic properties but less adverse effects than anabolic androgenic steroids. They are prohibited in both equine and human sports and there have been several cases of SARMs findings reported over the last few years. The aim of this study was to investigate the metabolite profile of the SARM ACP-105 (2-chloro-4-[(3-endo)-3-hydroxy-3-methyl-8-azabicyclo[3.2.1]oct-8-yl]-3-methylbenzonitrile) in order to find analytical targets for doping control. Oral administration of ACP-105 was performed in horses, where blood and urine samples were collected over a time period of 96 h. The in vivo samples were compared with five in vitro incubation models encompassing …


Antibiotic Resistance In Manure- Amended Agricultural Soils, MARANATHA ZELT, Zachary Staley, Xu Li, Bing Wang, Daniel N. Miller, Amy Schmidt 2021 University of Nebraska - Lincoln

Antibiotic Resistance In Manure- Amended Agricultural Soils, Maranatha Zelt, Zachary Staley, Xu Li, Bing Wang, Daniel N. Miller, Amy Schmidt

Nebraska Beef Cattle Reports

Manure application to agricultural land benefits soil health and agronomic yields. However, as antibiotic resistance becomes a more serious threat to public health, there is concern that antibiotic resistance originating from livestock manure could impact human health through contamination of the environment or food. This study sought to quantify this risk by monitoring concentrations of antibiotic resistance bacteria and genes in fallow soil during the period of October through April, representing fall manure application through spring planting. Resistance to three common antibiotics— tylosin, azithromycin and tetracycline— was monitored following application of fresh, stockpiled, or composted beef feedlot manure, or inorganic …


Science-Based Regulation Of Pharmacological Substances In Competition Horses, Jacob Machin 2021 University of Kentucky

Science-Based Regulation Of Pharmacological Substances In Competition Horses, Jacob Machin

Theses and Dissertations--Toxicology and Cancer Biology

Current testing methodologies within equine forensic toxicology focus on arbitrary thresholds and zero-tolerance policy. Modern analytical chemistry’s limits of detection are low enough that oftentimes femtogram-per-milliliter amounts of a substance can readily be identified in both blood and urine of a horse. For most pharmacologically relevant compounds, these concentrations have no relevance to pharmacological effect. It is therefore crucial that testing methodologies to determine appropriate thresholds and cut-offs be developed that are driven by biological activity rather than arbitrary limits of detection. This dissertation looks to address this by suggesting a system of calculated Effective Plasma Concentrations by which a …


Impact Of Masters Choice Corn Silage On Nutrient Digestion In Growing Cattle, Jiehua Xiong, Mitch M. Norman, Hannah C. Wilson, Caleb Crabtree, Galen E. Erickson 2021 University of Nebraska-Lincoln

Impact Of Masters Choice Corn Silage On Nutrient Digestion In Growing Cattle, Jiehua Xiong, Mitch M. Norman, Hannah C. Wilson, Caleb Crabtree, Galen E. Erickson

Nebraska Beef Cattle Reports

No abstract provided.


Effects Of Monensin And Protein Type On Performance Of Yearling Steers Grazing Smooth Bromegrass Pastures, Z. E. Carlson, K. Butterfield, Levi McPhillips, Galen E. Erickson, M. E. Drewnoski, J. C. MacDonald 2021 University of Nebraska-Lincoln

Effects Of Monensin And Protein Type On Performance Of Yearling Steers Grazing Smooth Bromegrass Pastures, Z. E. Carlson, K. Butterfield, Levi Mcphillips, Galen E. Erickson, M. E. Drewnoski, J. C. Macdonald

Nebraska Beef Cattle Reports

Summary with Implications

Two-year study evaluated the effects of monensin on protein type, either rumen degradable or rumen undegradable, with yearling steers grazing smooth bromegrass pastures. Steers were supplemented soybean meal (rumen degradable protein) or nonenzymatically browned soybean meal (rumen undegradable protein) at isonitrogenous levels to dried distillers grains plus solubles provided at 0.50% BW. Likewise, steers were provided either zero or 200 mg/hd/d of monensin for a total of six treatments with a 2 × 3 (no protein, RDP, or RUP) factorial design. There was no interaction of monensin by protein type. Providing monensin to grazing yearlings did not …


2021 Nebraska Beef Cattle Report, 2021 University of Nebraska - Lincoln

2021 Nebraska Beef Cattle Report

Nebraska Beef Cattle Reports

Cow-Calf Nutrition and Management: Metabolic Profile Associated with Pre-Breeding Puberty Status in Range Beef Heifers 5 • Milk Production Impacts on Cow Reproductive and Calf Growth Performance 8 • Genetic Selection Tools: Using Pooling to Capture Commercial Data for Inclusion in Genetic Evaluations 11 • Categorization of Birth Weight Phenotypes for Inclusion in Genetic Evaluations Using a Deep Neural Network 14 • Genetic Parameter Estimates for Age at Slaughter and Days to Finish in a Multibreed Population 16

Growing Calf and Yearling Management: Effects of Monensin and Protein Type on Performance of Yearling Steers Grazing Smooth Bromegrass Pastures 18 • …


Genetic Parameter Estimates For Age At Slaughter And Days To Finish In A Multibreed Population, Lindsay R. Upperman, Larry A. Kuehn, Matthew L. Spangler 2021 USDA MARC

Genetic Parameter Estimates For Age At Slaughter And Days To Finish In A Multibreed Population, Lindsay R. Upperman, Larry A. Kuehn, Matthew L. Spangler

Nebraska Beef Cattle Reports

No abstract provided.


Categorization Of Birth Weight Phenotypes For Inclusion In Genetic Evaluations Using A Deep Neural Network, Andre Ribeiro, Bruce Golden, Matthew L. Spangler 2021 University of Nebraska - Lincoln

Categorization Of Birth Weight Phenotypes For Inclusion In Genetic Evaluations Using A Deep Neural Network, Andre Ribeiro, Bruce Golden, Matthew L. Spangler

Nebraska Beef Cattle Reports

No abstract provided.


Using Pooling To Capture Commercial Data For Inclusion In Genetic Evaluations, Johnna L. Baller, Stephen D. Kachman, Larry A. Kuehn, Matthew L. Spangler 2021 University of Nebraska-Lincoln

Using Pooling To Capture Commercial Data For Inclusion In Genetic Evaluations, Johnna L. Baller, Stephen D. Kachman, Larry A. Kuehn, Matthew L. Spangler

Nebraska Beef Cattle Reports

No abstract provided.


Milk Production Impacts On Cow Reproductive And Calf Growth Performance, Tasha M. King, J. A. Musgrave, R. Funston, Travis Mulliniks 2021 University of Nebraska–Lincoln

Milk Production Impacts On Cow Reproductive And Calf Growth Performance, Tasha M. King, J. A. Musgrave, R. Funston, Travis Mulliniks

Nebraska Beef Cattle Reports

No abstract provided.


Metabolomic Profile Associated With Pre-Breeding Puberty Status In Range Beef Heifers, Joslyn K. Beard, Waseem Abbas, J. A. Musgrave, R. Funston, Samodha C. Fernando, Travis Mulliniks 2021 University of Nebraska-Lincoln

Metabolomic Profile Associated With Pre-Breeding Puberty Status In Range Beef Heifers, Joslyn K. Beard, Waseem Abbas, J. A. Musgrave, R. Funston, Samodha C. Fernando, Travis Mulliniks

Nebraska Beef Cattle Reports

Summary with Implications

A 4-yr study utilizing heifers from March and May calving herds collected serum samples prior to breeding to determine puberty status. Serum samples were used for Metabolomics analysis to investigate differences related to circulating serum metabolites in pubertal and non-pubertal heifers. Metabolomics, which is a shotgun approach analysis of a large number of small metabolites, is an emerging technology that can provide a more robust analysis of metabolism. No differences were observed in heifer ADG, pregnancy rate, or the percentage that calved within the first 21 d between heifers classified as pubertal and non-pubertal at the start …


Perceptions Of Barriers And Benefits Of Manure Use In Cropping Systems, Richard Koelsch, Daniel Andersen, Erin Cortus, Leslie Johnson, Amy Schmidt, Siok A. Siek, Melissa Wilson 2021 University of Nebraska-Lincoln

Perceptions Of Barriers And Benefits Of Manure Use In Cropping Systems, Richard Koelsch, Daniel Andersen, Erin Cortus, Leslie Johnson, Amy Schmidt, Siok A. Siek, Melissa Wilson

Nebraska Beef Cattle Reports

Animal agriculture is tasked with recycling the nitrogen and phosphorus in manures in an environmentally sound manner, typically as a soil fertility amendment, which often requires voluntary transfer of manures to crop farms on which there may be little or no history of manure use. # e ability of manure to compete with commercially available fertilizers is essential for this transfer. A survey was conducted of farmers’ and their advisors’ perceptions of the benefits and barriers to manure use in crops. There exists a strong recognition of manure’s agronomic, yield, and soil health benefits. However, many challenges associated with manure …


Predicting Nitrogen And Phosphorous Flows In Beef Open Lots, Megan N. Homolka, Galen E. Erickson, Richard K. Koelsch 2021 University of Nebraska - Lincoln

Predicting Nitrogen And Phosphorous Flows In Beef Open Lots, Megan N. Homolka, Galen E. Erickson, Richard K. Koelsch

Nebraska Beef Cattle Reports

Manure collected from open lot animal housing systems experiences variability due to weather conditions, management of beef cattle and pens, and other factors resulting in substantial changes in manure characteristics. Data from 15 winter and summer periods at the beef feedlot at Eastern Nebraska Research and Extension Center including 416 independent pen measurements, were summarized for nutrient mass balance, and then used to determine sources of variability impacting nitrogen and phosphorous. Understanding variability is important to regulated manure nutrient planning processes. The results of this review suggest significant challenge associated with planning based upon standard values for estimating manure characteristics. …


Transforming Manure And Cedar Mulch From “Waste” To “Worth”, Karla Melgar, Agustin Olivo, Richard Koelsch, Larry Howard, Gary Lesoing, Aaron Nygren, Randy Saner, Amy D. Timmerman, Troy Walz, Todd Whitney, Amy Schmidt 2021 University of Nebraska-Lincoln

Transforming Manure And Cedar Mulch From “Waste” To “Worth”, Karla Melgar, Agustin Olivo, Richard Koelsch, Larry Howard, Gary Lesoing, Aaron Nygren, Randy Saner, Amy D. Timmerman, Troy Walz, Todd Whitney, Amy Schmidt

Nebraska Beef Cattle Reports

In nearly every production environment, there are opportunities to capture profits if waste streams can be further processed or enhanced to create “value added” products. Animal feeding operations in Nebraska generate significant amounts of manure that are considered as a “waste” product. Additionally, Eastern red cedar (Juniperus virginiana) encroachment into grazing land has become an economic and ecological threat, reducing forage production, fragmenting wildlife habitats, and increasing the risk and severity of wild fires. Value- added uses for cedar woodchips are being sought by the Nebraska Forest Service and other agencies to promote tree management by landowners. Using manure and …


Using Coal Char From Sugar Production In Cattle Manure Management, Bijesh Maharjan, K. H. Jenkins PAS 2021 University of Nebraska - Lincoln

Using Coal Char From Sugar Production In Cattle Manure Management, Bijesh Maharjan, K. H. Jenkins Pas

Nebraska Beef Cattle Reports

Application of coal char, a coal combustion residue from the sugar factory in Scottsbluff, NE (containing up to 30 % C by weight), was evaluated as a nitrogen (N) loss mitigation tool for feedlot manure in three experiments. In experiment 1, when char was added to piled manure previously removed from feedlot pens, N loss potential was reduced (44% vs. 68% in the control). In experiment 2, manure was collected fresh from the animal, from the pen surface with cattle still in the pen, and from a pile removed from the pen. Char was mixed with these samples in replicated …


The Impact Of Oxidative Stress On Postmortem Meat Quality, Nicolas J. Herrera, Felipe A. Ribeiro, Nicolas A. Bland, Morgan L. Henriott, Kellen B. Hart, Jessica Lynn Petersen, Chris Calkins 2021 University of Nebraska - Lincoln

The Impact Of Oxidative Stress On Postmortem Meat Quality, Nicolas J. Herrera, Felipe A. Ribeiro, Nicolas A. Bland, Morgan L. Henriott, Kellen B. Hart, Jessica Lynn Petersen, Chris Calkins

Nebraska Beef Cattle Reports

This study was conducted to evaluate the relationship between animal oxidative status, using lipopolysaccharide (LPS) as a promoter for oxidation. This was used as a model to evaluate tenderization and meat quality factors early postmortem. Lambs were administered an intravenous injection of either saline, 50 ng/kg bodyweight (LPS50), or 100 ng/kg bodyweight (LPS100) every 72 hours for a 9- day period to stimulate physiological oxidative stress. After a day of rest, lambs were harvested, and pre- rigor Longissimus dorsi-muscles were obtained for transcriptomic analysis. Loins, aged for 1 and 14 days, were analyzed for attributes relating to oxidative potential, meat …


The Relationship Of Liver Abscess Scores And Early Postmortem Meat Tenderness, Nicolas J. Herrera, Felipe A. Ribeiro, Nicolas A. Bland, Morgan L. Henriott, Kellen B. Hart, Chris Calkins 2021 University of Nebraska - Lincoln

The Relationship Of Liver Abscess Scores And Early Postmortem Meat Tenderness, Nicolas J. Herrera, Felipe A. Ribeiro, Nicolas A. Bland, Morgan L. Henriott, Kellen B. Hart, Chris Calkins

Nebraska Beef Cattle Reports

Acidosis is one of the most common nutritional disorders found in commercial feedlots. Cattle diets with high concentrations of starch can cause rapid production of acids in the rumen, disrupting microbial fermentation, causing liver abscess formation, and lowering livestock performance. This study was conducted to evaluate the relationship between the occurrence of liver abscesses and beef tenderness early postmortem. Results showed numerically lesser shear force values (greater tenderness) in loins from animals without liver abscesses, however, this was not statistically significant for slice shear force or Warner- Bratzler shear force. Although the effects of liver abscess occurrence in relation to …


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