Terrestrial and Aquatic Ecology Commons^™

Recreational Caving Impacts Of Visitors In A High-Altitude Cave In Bolivian Andes: Main Effects On Microhabitat Structure And Faunal Distribution, Lais Furtado Oliveira, Rodrigo L. Ferreira, Jaime Iván Rodríguez Fernández, Marconi Souza Silva

International Journal of Speleology

The cave’s physical environment can be affected by tourism activities but only a few studies evaluated how recreational use may affect the cave fauna, mainly in caves with a low number of visitors per year. To test the hypothesis that recreational use led to changes in habitat structure and invertebrate diversity, distinct scales along a cave were analyzed. Distinct areas with and without human visitation were analyzed and transects (10 x 3 m) and quadrats (1 x 1 m) were used to access the invertebrate communities and environmental traits. Thirty-two invertebrate species were recorded, among which six are troglobitic. The …

Seasonal Climatic Niche And Migration Movements Of Double-Crested Cormorants, D. Tommy King, Guiming Wang, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Avian migrants are challenged by seasonal adverse climatic conditions and energetic costs of long-distance flying. Migratory birds may track or switch seasonal climatic niche between the breeding and non-breeding grounds. Satellite tracking enables avian ecologists to investigate seasonal climatic niche and circannual movement patterns of migratory birds. The Double-crested Cormorant (Nannopterum auritum, hereafter cormorant) wintering in the Gulf of Mexico (GOM) migrates to the Northern Great Plains and Great Lakes and is of economic importance because of its impacts on aquaculture. We tested the climatic niche switching hypothesis that cormorants would switch climatic niche between summer and winter …

Interannual Variation Of Ichthyofaunal Utilization Of A Man-Made Salt Marsh Creek In Mission Bay, California, Maria Angst

McNair Summer Research Program

Southern California’s wetlands are drastically declining due to human activities. Increasingly, marsh restoration and creation are being used to mitigate such losses. This study used minnow traps to resample the ichthyofauna of a created marsh (Crown Point Mitigation Site; CPMS) and an adjacent natural marsh (Kendall Frost) in Mission Bay, California, 26 years following the marsh creation. These data were compared to data collected from 1995-1998, immediately after marsh creation, and data from 2021. Fishes captured included Fundulus parvipinnis, Gillichthys mirabilis, Acanthagobius flavimanus, Ctenogobius sagittula, and Mugil cephalus. Species richness and dominance measures were higher in the natural relative to …

Does Macroalgae Invasion Alter Macroinvertebrate Or Macrophyte Communities In Wetland Habitats?, Alexander Krest

Great Lakes Center Masters Theses

Macroinvertebrates play an important role in maintaining ecosystem functionality. Processes such as nutrient cycling, and primary productivity are directly linked to macroinvertebrates and their value as a food source for higher trophic levels is undeniable. Therefore, disruptions to co-evolutionary adaptations between macroinvertebrates and native macrophytes remain a concern. This study investigated patterns in macroinvertebrate richness, abundance, and functional feeding group representation, as well as plant richness and total biomass across five sites in upstate New York with varying dominance by the non-native macroalgae, Starry Stonewort (Nitellopsis obtusa).

As N. obtusa proportional biomass increased, other plant community biomass declined at two …

Whalers In “A Post-Whaling World”: Sustainable Conservation Of Marine Mammals And Sustainable Development Of Whaling Communities—With A Case Study From The Eastern Caribbean, Russell Fielding

Honors College Faculty Publications

The sustainable conservation of marine mammals depends not only upon considerations made for the marine mammals themselves. In many parts of the world, human societies have developed a deep reliance upon marine mammals as a food source. The sustainability and the equitable, sustainable development of these communities should be considered alongside efforts to conserve the marine mammals upon which people rely. As an example of the complexity inherent to simultaneous efforts on both fronts, this paper reviews and synthesizes two lines of research related to a small-scale whaling operation for odontocetes (dolphins and toothed whales) based in the Eastern Caribbean. …

Solar Radiation And Soil Moisture Drive Tropical Forest Understory Responses To Experimental And Natural Hurricanes, J. Aaron Hogan, Joanne M. Sharpe, Ashley Van Beusekom, Sarah Stankavich, Samuel Matta Carmona, John E. Bithorn, Jamarys Torres-Díaz, Grizelle González, Jess K. Zimmerman, Aaron B. Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Tropical forest understory regeneration occurs rapidly after disturbance with compositional trajectories that depend on species availability and environmental conditions. To predict future tropical forest regeneration dynamics, we need a deeper understanding of how pulse disturbance events, like hurricanes, interact with environmental variability to affect understory demography and composition. We examined fern and sapling mortality, recruitment, and community composition in relation to solar radiation and soil moisture using 17 years of forest dynamics data (2003–2019) from the Canopy Trimming Experiment in the Luquillo Experimental Forest, Puerto Rico. Solar radiation increased 150% and soil moisture increased 40% following canopy trimming of experimental …

Comparative Susceptibility Of Eastern Cottontails And New Zealand White Rabbits To Classical Rabbit Haemorrhagic Disease Virus (Rhdv) And Rhdv2, Fawzi Mohamed, Thomas Gidlewski, Mary L. Berninger, Heather M. Petrowski, Alexa J. Bracht, Carla Bravo De Rueda, Roger W. Barrette, Meredith Grady, Emily S. O'Hearn, Charles E. Lewis, Karen E. Moran, Tracy L. Sturgill, Lorenzo Capucci, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Rabbit haemorrhagic disease virus (RHDV) is associated with high morbidity and mortality in the European rabbit (Oryctolagus cuniculus). In 2010, a genetically distinct RHDV named RHDV2 emerged in Europe and spread to many other regions, including North America in 2016. Prior to this study it was unknown if eastern cottontails (ECT(s); Sylvilagus floridanus), one of the most common wild lagomorphs in the United States, were susceptible to RHDV2. In this study, 10 wild-caught ECTs and 10 New Zealand white rabbits (NZWR(s); O. cuniculus) were each inoculated orally with either RHDV (RHDVa/GI.1a; n = 5 per species) or RHDV2 (a recombinant …

Disturbance Ecology Of The Sonadora River Rock Pool Insect Assemblage At Luquillo Experimental Forest, Puerto Rico, Patrick Gilkey

Master's Theses

Freshwater rock pools can serve as habitat for aquatic insects. Flash-flooding can have profound effects on insect communities in streams and rivers, but these effects have not been studied on freshwater rock pools. The goal of this thesis was to describe ecological patterns of the Sonadora River rock pool insect community at the Luquillo Experiment Forrest, Puerto Rico, specifically in response to intense flash-flooding, and then perform experiments to elucidate possible processes to explain those patterns. The rock pools contained primarily three taxa of Dipteran (true-fly) larvae, in order of decreasing abundance, 1) a newly discovered species of ceratopogonid (biting …

Wild Bees Respond Differently To Sampling Traps With Vanes Of Different Colors And Light Reflectivity In A Livestock Pasture Ecosystem, Roshani S. Acharya, Joan M. Burke, Timothy Leslie, Kelly Loftin, Neelendra K. Joshi

Entomology Faculty Publications and Presentations

Wild bees are important pollinators and monitoring their abundance and diversity is necessary to develop conservation protocols. It is imperative to understand differences in sampling efficiency among different trap types to help guide monitoring efforts. This study used a new vane trap design to collect bees in a livestock pasture ecosystem and examined the impact of six different vane colors on wild bee sampling. We recorded 2230 bees comprising 49 species and five families. The most abundant species were Augochlorella aurata (25.8%), Lasioglossum disparile (18.3%), Lasioglossum imitatum (10.85%), Agapostemon texanus (10.8%), Melissodes vernoniae (9.9%) and Halictus ligatus (4.7%). Traps with …

Genomic Tools Reveal Complex Social Organization Of An Invasive Large Mammal (Sus Scrofa), Chelsea L. Titus, Courtney F. Bowden, Timothy J. Smyser, Stephen L. Webb, James C. Beasley

United States Department of Agriculture Wildlife Services: Staff Publications

A comprehensive understanding of sociality in wildlife is vital to optimizing conservation and management efforts. However, sociality is complicated, especially for widely distributed species that exhibit substantive behavioral plasticity. Invasive wild pigs (Sus scrofa), often representing hybrids of European wild boar and domestic pigs, are among the most adaptable and widely distributed large mammals. The social structure of wild pigs is believed to be similar to European wild boar, consisting of matriarchal groups (sounders) and solitary males. However, wild pig social structure is understudied and largely limited to visual observations. Using a hierarchical approach, we incorporated genomic tools …

Distribution And Ecological Function Of Pacific Lamprey In The San Luis Obispo Creek Watershed, Parker Kalan

Master's Theses

Pacific lamprey (Entosphenus tridentatus) is an endemic species to coastal watersheds along the Pacific Rim in North America and Asia. The species' geographic distribution is retracting and has not been mapped precisely, and the ability for the species to provide ecosystem services, such as water filtration, for supporting watershed management has not been tested. The San Luis Obispo Creek watershed, California, USA is at the southern end of Pacific lamprey’s retracting distribution, and the San Luis Obispo watershed is impacted by degraded water quality, making investigation of Pacific lamprey in the San Luis Obispo Creek watershed of direct …

Impacts Of Sea Ice Loss On Polar Bear Diet, Prey Availability, Foraging Behaviors, And Human-Bear Interactions In The Arctic, Jasmin Chen

Master's Projects and Capstones

Anthropogenic-induced climate change has warmed the Arctic 2-3 times faster than the rest of the world, causing sea ice declines that introduce challenges for specialist species, such as polar bears, in adapting to rapid environmental changes. Comparative and quantitative analyses of three Hudson Bay polar bear subpopulations were used to determine the impacts of sea ice loss on polar bear diet, prey availability, foraging behaviors, and human-bear interactions in the Arctic. The study reveal that Hudson Bay polar bears experience the most severe impacts from sea ice declines, resulting in a 30% population decline. Due to their smaller body size, …

Impacts Of Nitrogen Enrichment On Corals – A Remote Sensing Approach, David E. Carrasco

Master's Projects and Capstones

Anthropogenic activities have resulted in ever-increasing threats to coral reefs globally, wherein the rate of environmental changes have exceeded the historical capacity of corals to adapt. This has threatened the persistence of coral ecosystems and their associated ecosystem services, which billions of people rely on for their livelihoods. The most prevalent stressor is nitrogen enrichment, which while present naturally, is exacerbated by the anthropogenic input of nutrients via the discharge of agricultural and urban waste waters. The focus is to answer the central research question of how nitrogen enrichment impacts corals, and how it interacts with other stressors with particular …

Hydrodynamic Limitations To Mangrove Seedling Retention In Subtropical Estuaries, Kelly M. Kibler, Christian Pilato, Linda Walters, Melinda Donnelly, Jyotismita Taye

Flow-biota Interaction and Natural Infrastructure Design

Mangrove forest sustainability hinges upon propagule recruitment and seedling retention. This study evaluates biophysical limitations to mangrove seedling persistence by measuring anchoring force of two mangrove species (Rhizophora mangle and Avicennia germinans). Anchoring force was measured in 362 seedlings via lateral pull-tests administered in mangrove forests of two subtropical estuaries and in laboratory-based experiments. Removal mechanism varied with seedling age: newly-established seedlings failed due to root pull-out while seedlings older than 3 months failed by root breakage. Anchoring force of R. mangle seedlings was consistently and significantly greater than A. germinans (GLM: p = 0.002), however force to …

The Spatial Ecology And Habitat Selection Of A Spotted Turtle (Clemmys Guttata) Population In Southwest Michigan, Michela Coury

Masters Theses

Turtles are arguably the most threatened group of vertebrates on the planet. Anthropogenic influences such as habitat loss and fragmentation, road mortality, subsidized predators, climate change, and illegal collection have contributed to their global decline. Understanding which isolated populations of turtles are viable despite these synergistic threats is crucial for making conservation and management decisions. In Michigan, the spotted turtle (Clemmys guttata) is a threatened species subjected to many negative anthropogenic influences that accelerate its rapid population decline. In order to properly sustain their populations, the goal of my research was to investigate relevant factors that help us …

Loggerhead Shrike Detectability And Occurrence In Coastal South Carolina Urban Areas, Michelle Krauser

Electronic Theses and Dissertations

Grassland birds, such as the loggerhead shrike (Lanius ludovicianus), are threatened by extensive land-use change, including urbanization. Loggerhead shrikes have been declining since the early 1900s and are rare or extirpated in portions of their former range. Obtaining reliable population estimates of loggerhead shrikes is important to identify demographic trends and ensure conservation decisions are based on an accurate assessment of their current status. Imperfect detection, or the inability to detect every shrike during a survey, can result in biased population estimates. Estimating detection probability is labor-intensive and requires assumptions that are difficult to satisfy in most field studies. Understanding …

Enzootic Trends Of Crassostrea Virginica And Perkinsus Marinus In North Inlet Estuary, South Carolina, Nico Martin D'Amico

Electronic Theses and Dissertations

The Eastern oyster (Crassostrea virginica) co-occurs with the protozoan parasite Perkinsus marinus (the causative agent for "Dermo") in US Atlantic and Gulf of Mexico estuaries. Oyster host functions as an ecological engineer and agent for benthic-pelagic coupling are compromised when P. marinus infections are common in populations (prevalence) and high in individuals (intensity). P. marinus infections in oysters from North Inlet estuary, South Carolina were quantified in relation to shell height (60-76 mm, ≥76 mm), sex (functional female, male, indeterminate), water temperature, and salinity. Three fringing reefs on a longitudinal transect from the inlet mouth into the watershed were sampled …

A Review Of Current Methods In Avian Dietary Analysis And Their Integrated Application To Characterize The Trophic Niche Of Louisiana Waterthrush (Parkesia Motacilla)., Brandon Hoenig

Electronic Theses and Dissertations

Characterizing a species’ dietary composition presents an avenue to understand many facets of its ecological niche and can provide essential information for the species’ long-term conservation. To date, the vast majority of diet studies have relied on direct identification of prey during foraging observations or from diet samples to characterize the dietary habits of birds. However, advancements in laboratory-based approaches have revolutionized the field of trophic ecology by allowing researchers to indirectly infer dietary habits with higher resolution across greater time scales. Here, I apply two of these laboratory-based techniques, namely DNA metabarcoding and stable isotope analysis, to characterize the …

Investigation Of Dna Variability And Phylogenetic Relationships Of Perlesta (Plecoptera: Perlidae) In Mississippi, James C. Valentine, Mac H. Alford

Master's Theses

The genus Perlesta Banks, 1906 (Plecoptera: Perlidae) consists of 35 species, 33 native to the United States and Canada and two native to China. For over a century these small, brown stonefly adults and freckled yellow nymphs have gone by the name of the type species of the genus, Perlesta placida, but taxonomic work in the genus since 1989 has resulted in the recognition of additional species. These species were mostly recognized and described using morphological characteristics, but two areas that are lacking include (1) linking nymphs to adults and (2) phylogenetic analysis of all species occurring in Mississippi …

Identifying Key Stream Restoration Variables In An Agriculturally Impaired Chesapeake Bay Watershed, Julia Portmann

Masters Theses, 2020-current

The Chesapeake Bay watershed spans several states, supports diverse ecosystems, and is crucial to local economies. However, agricultural practices in this region impair water quality. The Smith Creek watershed, within the Shenandoah Valley, was designated a showcase watershed in 2010 by the United States Department of Agriculture to demonstrate the efficacy of implementing restoration projects. We sampled fifteen farms ranging from unrestored to thirty-six years since restoration. At each site, we conducted a kick-net survey for macroinvertebrates, measured canopy cover, algal density, substrate size, and bank height and angle. We identified macroinvertebrates to family and calculated the Chesapeake Basin-wide Index …