Population Biology Commons^™

Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay

United States Department of Agriculture Wildlife Services: Staff Publications

In recent years, small unmanned aircraft systems (sUAS) have been used widely to monitor animals because of their customizability, ease of operating, ability to access difficult to navigate places, and potential to minimize disturbance to animals. Automatic identification and classification of animals through images acquired using a sUAS may solve critical problems such as monitoring large areas with high vehicle traffic for animals to prevent collisions, such as animal-aircraft collisions on airports. In this research we demonstrate automated identification of four animal species using deep learning animal classification models trained on sUAS collected images. We used a sUAS mounted with …

Spatial Variation In Direct And Indirect Contact Rates At The Wildlife-Livestock Interface For Informing Disease Management, Anni Yang, Raoul K. Boughton, Ryan S. Miller, Bethany Wight, Wesley M. Anderson, James C. Beasley, Kurt C. Vercauteren, Kim M. Pepin, George Wittemyer

United States Department of Agriculture Wildlife Services: Staff Publications

Little is known about disease transmission relevant contact rates at the wildlife-livestock interface and the factors shaping them. Indirect contact via shared resources is thought to be important but remains unquantified in most systems, making it challenging to evaluate the impact of livestock management practices on contact networks. Free-ranging wild pigs (Sus scrofa) in North America are an invasive, socially-structured species with an expanding distribution that pose a threat to livestock health given their potential to transmit numerous livestock diseases, such as pseudorabies, brucellosis, trichinellosis, and echinococcosis, among many others. Our objective in this study was to quantify …

Plague Exposure In Mammalian Wildlife Across The Western United States, Sarah N. Bevins, Jeffrey C. Chandler, Nicole Barrett, Brandon S. Schmit, Gerald W. Wiscomb, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Plague is caused by a bacterial pathogen (Yersinia pestis) that can infect a wide range of mammal species, but its presence in wildlife is often underappreciated. Using a large-scale data set (n = 44,857) that details the extent of Y. pestis exposure in wildlife, we document exposure in 18 wildlife species, including coyotes (Canis latrans), bobcats (Lynx rufus), and black bears (Ursus americanus). Evidence of plague activity is widespread, with seropositive animals detected in every western state in the contiguous United States. Pathogen monitoring systems in wildlife that are both large scale …

Data-Driven Management—A Dynamic Occupancy Approach To Enhanced Rabies Surveillance Prioritization, Amy J. Davis, Jordana D. Kirby, Richard B. Chipman, Kathleen M. Nelson, Amy T. Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

Rabies lyssavirus (RABV) is enzootic in raccoons across the eastern United States. Intensive management of RABV by oral rabies vaccination (ORV) has prevented its spread westward and shown evidence of local elimination in raccoon populations of the northeastern US. The USDA, Wildlife Services, National Rabies Management Program (NRMP) collaborates with other agencies to implement broad-scale ORV and conducts extensive monitoring to measure the effectiveness of the management. Enhanced Rabies Surveillance (ERS) was initiated during 2005 and updated in 2016 to direct surveillance efforts toward higher-value specimens by assigning points to different methods of encountering specimens for collection (strange-acting, roadkill, surveillance-trapped, …

Rabbit Control: Rhdv1 K5, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

The national release of the Korean strain of rabbit haemorrhagic disease virus, RHDV1 K5, took place during the first week of March 2017. It was the first time in 20 years a new rabbit biocontrol agent had been released into Australia, and was part of a 20-year national biocontrol plan for rabbits. More than 600 release sites were selected, including 110 sites in Western Australia (WA).

RHDV1 K5 is a naturally occurring Korean variant of the rabbit haemorrhagic disease virus (RHDV). Its release was expected to boost management and help slow the increase in rabbit numbers. RHDV1 K5 does not …

Initial Assessment Of Potential Relationships Between Plant Communities And The Soil Microbiome In Closed Forest And Longleaf Pine Restoration Sites., Sean Davis, Ian Kennedy

Symposium of Student Scholars

Longleaf pine is an endangered ecosystem characterized by high levels of biodiversity.

Our study took place in the Sheffield Wildlife Management Area located in the Piedmont ecoregion of Georgia in Paulding County. Fifty plots of 10 x 30 m² were setup on south or north facing slopes, some in covered forest, and some in an area actively being restored for the longleaf pine. All trees above 1.37 m were identified and had their diameter measured, and species diversity, relative density, dominance, and frequency were determined. Herbaceous plant cover percentages were recorded in select plots. Soil samples were also collected …

A Reevaluation Of The Phylogeography Of The Chattahoochee Slimy Salamander (Plethodon Chattahoochee) Using Next-Generation Genomic Data, Jadin Cross

Symposium of Student Scholars

The Plethodon glutinosus species complex is a group of large-bodied, lungless salamanders that are widespread across the eastern United States. Species in this group are morphologically cryptic and were originally delimited using allozyme data, but in most cases, the extent of contemporary gene flow between named taxa has not be rigorously evaluated. The Appalachian Mountains of northern Georgia are home to several members of this group—including P. glutinosus, P. teyahalee, P. chlorobryonis, and P. chattahoochee. P. chattahoochee has been found to be especially cryptic both morphologically and genetically as both intraspecific genetic variation and species boundaries within …

Preliminary Inventory And General Aspect Of The Distribution Of Culicidae Species In The Steppe Region (M'Sila, Algeria), Abdelmadjid Yagoub Asloum, Saliha Benhissen, Wafa Habbachi, Sarra Habbachi, Zakaria Hedjouli, Zihad Bouselama, Abdelkrim Tahraoui

Journal of Bioresource Management

Mosquitoes are important living organisms that participate in the different levels of food chains. However, many families include vector species capable to transmit viruses, bacteria and parasites to both humans and animals, threatening the public health. The goal of this work was to describe the biological diversity of mosquito species in different areas in M'sila; Algeria based on the ecological nature of their habitat. The breeding sites found were 18 distributed in five areas (Berhoum, Bou Saâda, El hamel, Hammam Dhalaa and M'sila). The inventory that was carried out from September to April every year from 2017 to 2019 has …

Cats And Wildlife: An Animal Welfare Perspective., John Hadidian

Management - General

While there is no question that outdoors cats have an impact on wildlife, the extent and significance of this impact is the subject of considerable debate. The controversy surrounding outdoor cats can be traced back at least a century, with contemporary claims of threats to global biodiversity bringing animal welfare and conservation interests directly into opposition, largely over the means of managing conflicts. The irony in this is that cat defenders and cat detractors generally agree that it is in the best interests of cats that they should be shielded from the vagaries of outdoor life. While there are practical …

Interspersed Denuded Zone (Idz): How Patchy Leaf Litter Dynamics In A Buckthorn-Invaded Urban Woodland Can Affect Microarthropod Species Richness, Angela Stenberg

DePaul Discoveries

Biodiversity loss may serve as a key diagnostic of the Anthropocene. An important driver of this loss is by means of invasive species. In this study of a forest preserve in Chicago, Illinois we examined Interspersed Denuded Zones (IDZs for short), which are areas of patchy leaf litter in invaded forests caused in this case by the rapid decomposition of litter from buckthorn (Rhamnus cathartica). We characterized the leaf litter mass in IDZs and enumerated litter-inhabiting microarthropod populations. We found that plots of high buckthorn density are associated with IDZs: there was significantly less leaf litter mass in …

Invader Removal Triggers Competitive Release In A Threatened Avian Predator, J. David Wiens, Katie M. Dugger, J. Mark Higley, Damon B. Lesmeister, Alan B. Franklin, Keith A. Hamm, Gary C. White, Krista E. Dilione, David C. Simon, Robin R. Bown, Peter C. Carlson, Charles B. Yackulic, James D. Nichols, James E. Hines, Raymond J. Davis, David W. Lamphear, Christopher Mccafferty, Trent L. Mcdonald, Stan G. Sovern

United States Department of Agriculture Wildlife Services: Staff Publications

Changes in the distribution and abundance of invasive species can have far-reaching ecological consequences. Programs to control invaders are common but gauging the effectiveness of such programs using carefully controlled, large-scale field experiments is rare, especially at higher trophic levels. Experimental manipulations coupled with long-term demographic monitoring can reveal the mechanistic underpinnings of interspecific competition among apex predators and suggest mitigation options for invasive species. We used a large-scale before-after control-impact removal experiment to investigate the effects of an invasive competitor, the barred owl (Strix varia), on the population dynamics of an iconic old-forest native species, the northern spotted owl …

Nicarbazin As An Oral Contraceptive In Eared Doves, Lourdes Olivera, Silvia Pereyra, Georgget Banchero, Guillermo Tellechea, Jorge Sawchik, Michael L. Avery, Ethel Rodríguez

United States Department of Agriculture Wildlife Services: Staff Publications

Eared doves (Zenaida auriculata) are responsible for substantial losses in cereal and oil crops as well as in dairy and feedlot production in the southern cone of South America. Various strategies have been shown to be effective in reducing damage at the farm scale, but in some scenarios, it is necessary to also incorporate population control methods due to excessive bird population size. An alternative approach to reduce pest bird populations is the use of contraceptive methods, minimizing the impact on the environment and non-target populations. Nicarbazin is registered in the United States as a contraceptive for Branta …

Avian Influenza A Virus Susceptibility, Infection, Transmission, And Antibody Kinetics In European Starlings, Jeremy W. Ellis, J. Jeffrey Root, Loredana M. Mccurdy, Kevin T. Bentler, Nicole L. Barrett, Kaci K. Vandalen, Katherine L. Dirsmith, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAVs) pose risks to public, agricultural, and wildlife health. Bridge hosts are spillover hosts that share habitat with both maintenance hosts (e.g., mallards) and target hosts (e.g., poultry). We conducted a comprehensive assessment of European starlings (Sturnus vulgaris), a common visitor to both urban and agricultural environments, to assess whether this species might act as a potential maintenance or bridge host for IAVs. First, we experimentally inoculated starlings with a wild bird IAV to investigate susceptibility and replication kinetics. Next, we evaluated whether IAV might spill over to starlings from sharing resources with a …

Mesopredator Frugivory Has No Effect On Seed Viability And Emergence Under Experimental Conditions, John P. Draper, Trisha B. Atwood, Noelle G. Beckman, Karin M. Kettenring, Julie K. Young

United States Department of Agriculture Wildlife Services: Staff Publications

Members of the order Carnivora are a unique and important seed disperser who consume and deposit undamaged seeds while providing regular long-distance seed dispersal opportunities. Some members of Carnivora, such as coyotes (Canis latrans), are undergoing range expansions which may help the plant species they consume colonize new locations or replace dispersal services provided by recently extirpated species. In this study, we evaluated aspects of the seed dispersal effectiveness of coyotes and gut passage time to determine the potential dispersal distances for three commonly consumed and commonly occurring plant species (Amelanchier alnifolia, Celtis ehrenbergiana, and Juniperus osteosperma). We also investigated …

Intensive Hunting Pressure Changes Local Distribution Of Wild Boar, Jakub Drimaj, Jiří Kamler, Radim Plhal, Přemysl Janata, Zdeněk Adamec, Miloslav Homolka

Human–Wildlife Interactions

Wild boar (Sus scrofa) is now an important species of wild ungulates in Central Europe. Next to conflicts of wild boar with agriculture, the main threat of wild boar presence lies in the expansion of African swine fever across Europe. The regulation of the wild boar population is complicated by the high reproduction rate and intelligent behavior of the species, which limits hunting effectiveness. We analyzed the spatial behavior of wild boar in an environment with a lack of natural food resources. The study area consisted of a forest complex (1,283 ha) with 2 areas. In the “risk” …

Бадхызские Архивы. Том 1, Р. И. Горелова, В. Фет

Open Access Books

Gorelova, RI, Fet V, editors. The Badkhyz Archives, Vol. 1. Huntington, WV: Marshall University Libraries; 2021. 444 p.

This volume compiles memoirs and research information about the unique Badkhyz Natural Reserve, now in Turkmenistan, formerly at the southernmost point of the USSR. Established in 1941, the Reserve—nicknamed a Serengeti of Central Asia— housed many unique and endangered species, with an iconic wild ass, or kulan, preserved only there. The book is dedicated to the 80th anniversary of the Reserve and the 90th birthday of Yuri Gorelov (1931—2018), an extraordinary naturalist who worked in Badkhyz in 1956—1978. His own documentary stories, …

Leveraging Multiple Data Sources: How Catch Data, Metadata, And Genetic Samples Can Aid The Recovery Of Endangered Smalltooth Sawfish (Pristis Pectinata), Kelcee Smith

LSU Doctoral Dissertations

The small population sizes characteristic of many imperiled species means that they are vulnerable to both demographic and genetic extinction threats. Responses to these threats (e.g., population trends, genetic diversity estimates) are often difficult to obtain, but critical for conservation. Thus, researchers studying imperiled species may have to consult multiple data sources, collaborate with a wide variety of stakeholders, or ask new questions about previously collected data. I used this approach to understand more about the United States (U.S.) population of Pristis pectinata, an endangered elasmobranch that has declined up to 95% due to habitat loss and bycatch in …

The Effects Of Climate And Demographic History In Shaping Genomic Variation Across Populations Of The Desert Horned Lizard (Phrynosoma Platyrhinos), Keaka Farleigh, Sarah A. Vladimirova, Christopher Blair, Jason T. Bracken, Nazila Koochekian, Drew R. Schield, Daren C. Card, Nicholas Finger, Jonathan Henault, Adam D. Leaché, Todd A. Castoe, Tereza Jezkova

Publications and Research

Species often experience spatial environmental heterogeneity across their range, and populations may exhibit signatures of adaptation to local environmental characteristics. Other population genetic processes, such as migration and genetic drift, can impede the effects of local adaptation. Genetic drift in particular can have a pronounced effect on population genetic structure during large-scale geographic expansions, where a series of founder effects leads to decreases in genetic variation in the direction of the expansion. Here, we explore the genetic diversity of a desert lizard that occupies a wide range of environmental conditions and that has experienced post-glacial expansion northwards along two colonization …

Distilling Professional Opinion To Gauge Vulnerability Of Guam Avifauna To Brown Treesnake Predation, Robert M. Mcelderry, Eben H. Paxton, Andre V. Nguyen, Shane R. Siers

United States Department of Agriculture Wildlife Services: Staff Publications

The avifauna of Guam was devastated by the introduction of the Brown Treesnake, and the restoration of native birds would need to address the problem with eradication or suppression of BTS. With eradication of the snake unlikely in the near term, and suppression capabilities limited to specific finite areas, key information for reintroductions is how low BTS abundance will likely need to be for each bird species to be re-established based on their vulnerability to BTS predation. Here, we estimate vulnerability, which can no longer be measured directly, so biologists who are familiar with one or more of seven Guam …

Notes On Eastern North American Butterflies, David J. Hoag, Harry Pavulaan, Brian Taber, Kenneth Lorenzen, Richard D. Ullrich

The Taxonomic Report of the International Lepidoptera Survey

Editor’s Note (Harry Pavulaan). New natural history elements and distribution records of several eastern North American butterflies are reported. While diversity and distribution of butterflies in the eastern United States are commonly believed to be fully known, the findings presented here show that much is yet to be learned of our butterfly fauna.

Includes:

1. Pages 1-3

Lethe eurydice and L. appalachia Larvae (Nymphalidae: Satyrinae) Eat Their Shed Cuticle (Exuvia) Soon after Molting in Vermont, USA by David J. Hoag

Abstract

Larvae of Lethe eurydice and L. appalachia were observed eating their newly shed cuticle (exuvia). Further studies are needed …