Population Biology Commons^™

Jellyfish Throwdown: Invasive Versus Native, Brooke Bemowski, Trisha Huynh, Lindsay J. Sullivan, Wim Kimmerer

STAR Program Research Presentations

The San Francisco Bay Estuary is home to many species of marine and wildlife that create a delicate ecological balance. Invasive jellyfish introduced to the bay though cargo shipping are believed to be competing with the endangered delta smelt for the same food source of copepods. Samples of zooplankton were taken from high and low salinity zones in the San Francisco Bay over three years in months June through February to correlate with the peak of the jellyfish lifecycle. The preserved samples are looked through and jellyfish are removed and recorded. The species of jellyfish is determined using features such …

Biological Condition Of Money Pont Benthic Communities, Southern Branch Of The Elizabeth River (2010 And 2013), Daniel M. Dauer

Elizabeth River Reports

Executive Summary

The subtidal macrobenthic communities off Money Point in the Southern Branch of the Elizabeth River were quantitatively sampled in summer 2010 (Dauer 2011). The designated Money Point study area was part of a sediment contaminant remediation effort. The primary objectives of the present study were to: (1) characterize the biological health of the benthos of Money Point comparing pre-remediation (2010) and post-remediation (2013) conditions and (2) assess the effectiveness of the sediment contamination remediation efforts with respect to Money Point benthos. In this report the macrobenthic communities off Money Point were resampled in the summer of 2013 after …

An Agent-Based Model Of Ant Colony Energy And Population Dynamics: Effects Of Temperature And Food Fluctuation, Guo Xiaohui

Electronic Theses and Dissertations

The ant colony, known as a self-organized system, can adapt to the environment by a series of negative and positive feedbacks. There is still a lack of mechanistic understanding of how the factors, such as temperature and food, coordinate the labor of ants. According to the Metabolic Theory of Ecology (MTE), the metabolic rate could control ecological process at all levels. To analyze self-organized process of ant colony, we constructed an agent-based model to simulate the energy and population dynamics of ant colony. After parameterizing the model, we ran 20 parallel simulations for each experiment and parameter sweeps to find …

Indigenous Knowledge And Science Unite To Reveal Spatial And Temporal Dimensions Of Distributional Shift In Wildlife Of Conservation Concern, Christina N. Service, Megan S. Adams, Kyle A. Artelle, Paul C. Paquet, Laura V. Grant, Chris T. Darimont

Population Distribution and Habitat Collection

Range shifts among wildlife can occur rapidly and impose cascading ecological, economic, and cultural consequences. However, occurrence data used to define distributional limits derived from scientific approaches are often outdated for wide ranging and elusive species, especially in remote environments. Accordingly, our aim was to amalgamate indigenous and western scientific evidence of grizzly bear (Ursus arctos horribilis) records and detail a potential range shift on the central coast of British Columbia, Canada. In addition, we test the hypothesis that data from each method yield similar results, as well as illustrate the complementary nature of this coupled approach. Combining information from …

Population And Demographic Structure Of Ixodes Scapularis Say In The Eastern United States., Joyce M. Sakamoto, Jerome Goddard, Jason L. Rasgon

CALS Publications

INTRODUCTION: The most significant vector of tick-borne pathogens in the United States is Ixodes scapularis Say (the blacklegged tick). Previous studies have identified significant genetic, behavioral and morphological differences between northern vs. southern populations of this tick. Because tick-borne pathogens are dependent on their vectors for transmission, a baseline understanding of the vector population structure is crucial to determining the risks and epidemiology of pathogen transmission. METHODS: We investigated population genetic variation of I. scapularis populations in the eastern United States using a multilocus approach. We sequenced and analyzed the mitochondrial COI and 16S genes and three nuclear genes (serpin2, …

A New Species Of Chiasmocleis (Microhylidae, Gastrophryninae) From The Atlantic Forest Of Espírito Santo State, Brazil, João Filipe Tonini, Maruicio Forlani, Rafael O. De Sá

Biology Faculty Publications

Among Neotropical microhylids, the genus Chiasmocleis is exceptionally diverse. Most species ofChiasmocleis were described in recent years based on external morphology, but recent studies using molecular data did not support the monophyly of the species groups clustered based on feet webbing. Furthermore, a phylogeographic study of C. lacrimae estimated high genetic divergence and low gene flow among populations across small geographic ranges. Increasing the molecular and geographic sampling, and incorporating morphological data, we identified new cryptic species. Herein, we used novel genetic and morphological data to describe a new species of Chiasmocleis.

Across-Year Social Stability Shapes Network Structure In Wintering Migrant Sparrows, Daizaburo Shizuka, Alexis S. Chaine, Jennifer Anderson, Oscar Johnson, Inger Marie Laursen, Bruce E. Lyon

School of Biological Sciences: Faculty Publications

Migratory birds often form flocks on their wintering grounds, but important details of social structure such as the patterns of association between individuals are virtually unknown. We analysed networks of co-membership in short-term flocks for wintering golden-crowned sparrows (Zonotrichia atricapilla) across three years and discovered social complexity unsuspected for migratory songbirds. The population was consistently clustered into distinct social communities within a relatively small area (~ 7 ha). Birds returned to the same community across years, with mortality and recruitment leading to some degree of turnover in membership. These spatiotemporal patterns were explained by the combination of space …

Spatial And Temporal Variability In Net Community Metabolism In The Middle Atlantic Bight, Georges Bank, And Gulf Of Maine: Observations Of Net Heterotrophic Phases In The Highly Productive Coastal Zone, Cory James Staryk

OES Theses and Dissertations

Net community metabolism (NCM), the balance between primary production and community respiration, was measured during two cruises, June 2011 and August 2012, in the Middle Atlantic Bight, Georges Bank and Gulf of Maine. Net heterotrophy was observed in Georges Bank and Gulf of Maine during the June 2011 cruise. During the August 2012 cruise, net heterotrophy was observed in the Middle Atlantic Bight and net autotrophy was observed in Georges Bank and the Gulf of Maine. Dark community respiration increased (DCR) with biomass and temperature. Gross community production (GCP) also increased with Chl a, bicarbonate uptake, and temperature. Net …

The Ecological Impact Of Casitas On Caribbean Spiny Lobster (Panulirus Argus) Populations In The Florida Keys, Fl, (Usa), Benjamin C. Gutzler

Biological Sciences Theses & Dissertations

Casitas are artificial structures placed on the seabed by fishermen to aggregate Caribbean spiny lobsters (Panulirus argus) for ease of capture. Some researchers suggest that they may also enhance lobster populations in shelter-limited environments. Conversely, aggregation of lobsters within casitas may be detrimental to the population if the nutritional condition or mortality of lobsters is poorer in casitas than in natural shelters. Small juvenile lobsters may be at particular risk because their foraging range is smaller and they are more readily preyed upon than larger lobsters. If so, then casitas placed in lobster nurseries may function as "ecological traps"; wherein …

Ex Uno Plures: Clonal Reinforcement Drives Evolution Of A Simple Microbial Community, Margie A. Kinnersley, Jared Wenger, Evgueny Kroll, Julian Adams, Gavin Sherlock, Frank Rosenzweig

Biological Sciences Faculty Publications

A major goal of genetics is to define the relationship between phenotype and genotype, while a major goal of ecology is to identify the rules that govern community assembly. Achieving these goals by analyzing natural systems can be difficult, as selective pressures create dynamic fitness landscapes that vary in both space and time. Laboratory experimental evolution offers the benefit of controlling variables that shape fitness landscapes, helping to achieve both goals. We previously showed that a clonal population of E. coli experimentally evolved under continuous glucose limitation gives rise to a genetically diverse community consisting of one clone, CV103, that …

Stop Lion Hunting, Paul A. Johnsgard

Paul Johnsgard Collection

According to my informal tally, at least seven mountain lions have so far been killed in Nebraska during 2014, as follows: 1 & 2: Two were killed on January 1 and 2, at the start of Nebraska's first hunting season. Both were killed by treeing the animals with dogs, then shooting them execution style. One was killed by a man who bought the permit ($13,500) at auction; the other by a teenager who won a Game & Park's fund -raising lottery. 3: An adult male was accidentally killed by a vehicle on February 1, in Sioux County. 4: An adult …

Cercyonis Pegala Agawamensis (Satyridae): A New Butterfly Subspecies From The Coastal Salt Marshes Of The Northeastern United States Of America, Matthew D. Arey, Alex Grkovich

The Taxonomic Report of the International Lepidoptera Survey

A new subspecies of the Common Wood Nymph (Cercyonis pegala) from the New England coastline in the northeastern region of the United States is described on the basis of phenotype, behavior, habitat, seasonality, flight period, and phenology. Agawamensis is univoltine as in all pegala. The newly described subspecies occurs almost entirely in coastal salt marshes and estuarine meadows, quite atypical as understood for Cercyonis pegala. The newly described subspecies agawamensis predominately prefers and occurs within large open salt marshes but can also be found in similar habitat along smaller tidal rivers, coastal inlets and streams

A Case Of Sympatric Celastrina Ladon (Cramer), Celastrina Lucia (W. Kirby) And Celastrina Neglecta (Edwards) (Lycaenidae: Polyommatinae) In Northern Virginia, With Additional Records Of C. Lucia In Virginia, Harry Pavulaan

The Taxonomic Report of the International Lepidoptera Survey

A case of fully sympatric Celastrina ladon, C. lucia, and early spring brood C. neglecta is documented at a site in northern Virginia. Observations indicate that all three species occupy the same habitat, fly during the same flight period and utilize the same hostplant with no evidence of hybridization. C. ladon and C. lucia are obligate univoltines while C. neglecta is multivoltine. A later flight (second brood) of Celastrina neglecta at the same site utilizes eriophyid mite-induced leaf galls on the very same host tree species. Additional Virginia records of C. lucia are documented.

Larval Host Plants Of Enodia Anthedon, Satyrodes Appalachia And S. Eurydice In Vermont, Usa, David J. Hoag

The Taxonomic Report of the International Lepidoptera Survey

Field observation and captive rearing was used to clarify larval host plant use in Enodia anthedon, Satyrodes appalachia, and S. eurydice in Vermont, USA. In nature S. appalachia larvae were found on Carex lacustris, C. lupulina, C. gracillima, and C. tuckermanii. Enodia anthedon in nature was found to oviposit on grass and on Carex lacustris. Larvae of E. anthedon were found on C. lacustris and C. lupulina. In captivity, all but two E. anthedon larvae chose Carex over grass. Both E. appalachia and E. anthedon …

Comparing Population Density Estimation Techniques For Columbia Black-Tailed Deer (Odocoileus Hemionus Columbianus): Fecal Standing Crop And Distance Sampling Methods, Jubilee D. Brenneman

Honors Projects

I estimated deer density and population size on Blakely Island, WA, using the fecal standing crop (FSC) method described by Martin et al. (2011). I compared the FSC method with a well established and broadly applicable estimation method, distance sampling. Additionally, architecture of a commonly browsed shrub, Ocean Spray (Holodiscus discolor), was measured as an indicator of browsing pressure. Fecal standing crop was estimated by counting pellet groups along 26, 100 x 2m line transects. Deer density was estimated using these data and the equation derived by Martin et al. (2011). Distance sampling consisted of recording perpendicular distance …

Human Diversity In Jordan: Polymorphic Alu Insertions In General Jordanian And Bedouin Groups, Daniela Zanetti, May Sadiq, Robert Carreras-Torres, Omar Khabour, Almuthanna Alkaraki, Esther Esteban, Marc Via, Pedro Moral

Human Biology Open Access Pre-Prints

Jordan, located in the Levant region, is a crucial area to investigate human migration between Africa and Eurasia. Even thought, the genetic history of Jordanians is far to be clarified including the origin of the Bedouins today resident in Jordan. Here, we provide new genetic data on autosomal independent markers in two Jordanian population samples (Bedouins and general population) in order to approach the genetic diversity inside this country and to give new information about the genetic position of these populations in the frame of the Mediterranean and Middle East area. The analyzed markers are 18 Alu polymorphic insertions characterized …

Human Paternal Lineages, Languages And Environment In The Caucasus, David Tarkhnishvili, Alexander Gavashelishvili, Marine Murtskhvaladze, Mariam Gabelaia, Gigi Tevzadze

Human Biology Open Access Pre-Prints

Publications that describe the human Y-DNA haplogroup composition in different ethnic or linguistic groups and geographic regions provide no explicit explanation of the distribution of human paternal lineages in relation to specific ecological conditions. Our research attempts to address this topic for the Caucasus – a geographic region that encompasses a relatively small area but harbors high linguistic, ethnic, and Y-DNA haplogroup diversity. 224 men that identified themselves as ethnic Georgian were genotyped for Y-chromosome 23 STR markers and assigned to their geographic places of origin. The genotyped data were supplemented with the published data on the haplogroup composition and …

Coral-Fish Dynamics And Interactions: A Case Study Of Grand Cayman, Eileen Shea Davis

Lawrence University Honors Projects

To better understand the ecological interactions of coral reefs, it is important to understand the mechanisms that control the distribution and abundance of reef-building corals as well as the mechanisms that control the diversity and abundance of the fish community that inhabits these reef habitats. The purpose of this study was to identify specific coral-fish interactions among the reefs of Grand Cayman in order to gain insight into the biological effects of fish on the assemblage of hard corals. Using data collected by the Lawrence University Marine Program (LUMP), a number of exploratory statistical analyses were run in order to …

Phylogeography Of E1b1b1b-M81 Haplogroup And Analysis Of Its Subclades In Morocco, Ahmed Reguig, Nourdin Harich, Abdelhamid Barakat, Hassan Rouba

Human Biology Open Access Pre-Prints

In this work, we have analyzed a total of 295 unrelated Berber-speaking men from the northern, center and southern of Morocco, in order to characterize frequency of E1b1b1b-M81 haplogroup and to refine the phylogeny of its subclades: E1b1b1b1-M107, E1b1b1b2-M183 and E1b1b1b2a-M165. For this purpose, we have typed four biallelic polymorphisms: M81, M107, M183 and M165. As results, a large majority of the Berber-speaking male lineages belong to the Y chromosomal E1b1b1b-M81 haplogroup. The frequency ranged from 79.1 to 98.5% in all localities sampled. Then, the E1b1b1b2-M183 was the most dominant subclade in our samples, which ranged from 65.1% to 83.1%. …

Mitochondrial Dna Variability Among Six South-American Amerindian Villages From The Pano Linguistic Group, Celso T. Mendes-Junior, Aguinaldo L. Simoes

Human Biology Open Access Pre-Prints

Although scattered throughout a large geographic area, the members of the Pano linguistic group present strong ethnic, linguistic and cultural homogeneity, a feature that causes them to be considered as components of a same “Pano” tribe. Nevertheless, the genetic homogeneity between Pano villages has not been examined before. To study the genetic structure of the Pano linguistic group, four major Native American mitochondrial DNA (mtDNA) founder haplogroups were analyzed in 77 Amerindians from six villages of four Pano tribes (Katukina, Kaxináwa, Marúbo, and Yaminawa) located in the Brazilian Amazon. The central position of these tribes in the continent makes them …