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Does Adaptation To High Altitude Affect Hypoxia-Dependent Structural Plasticity Of The Placenta?, Hannah C. Johnson, Kathryn Wilsterman, Jeffrey M. Good, Zachary A. Cheviron

Undergraduate Theses, Professional Papers, and Capstone Artifacts

High altitude residence causes fetal growth restriction (FGR) during pregnancy in lowland mammals. Highland-adapted mammals do not experience this altitude-dependent FGR, suggesting that adaptation to altitude has produced some protective mechanisms. However, the specific mechanisms by which highland-adapted mammals preserve fetal growth at altitude remain unknown. We hypothesized that highland-adapted populations protect fetal growth through structural changes to the placenta that increase surface area for nutrient and gas exchange. We tested this hypothesis using deer mice (Peromyscus maniculatus), from populations native to low [400 m, Lincoln, NE] and high [4300 m, Mt. Evans, CO] altitudes. We predicted structural …

Spatial And Non-Spatial Patterns Of Genetic Diversity In Neotropical Bats, Andrea J. Calderon Brito

Dissertations and Theses

Macroecological studies that predict genetic diversity and its correlation with other biodiversity dimensions are essential to conservation in a rapidly changing environment. However, in bats (order Chiroptera), studies associating abiotic or ecological traits that could help to predict genetic diversity are scarce, even for singular species. In the Neotropics, the highest concentration of mammal and amphibian genetic diversity has been found in the Andes mountains and the Amazon Rainforest, yet it is an open question whether bat genetic diversity is also higher in these regions, or even if any abiotic factors are correlated with bat genetic diversity. Additionally, it is …

Molecular And Genetic Studies On A Sipd/Ipad-Related Virulence Spike Protein From Immune-Suppressive Particles Of A Drosophila Parasitoid, Carlo Miguel A. Sevilla

Dissertations and Theses

Parasitoid wasps are effective biological control agents that have evolved intricate host immune suppression strategies to overcome host immune defenses. The most important anti-parasite defense mechanism is encapsulation, where the host’s blood cells surround the wasp egg. In the Drosophila/Leptopilina host-parasitoid system, extracellular vesicles (EVs) are oviposited along with the wasp egg. The EVs possess spikes and contain hundreds of proteins, some of which enable wasp eggs to escape encapsulation by changing the morphology and function of hemocytes, or killing them. Previous studies have identified an abundant surface/spike protein (SSp40) from Leptopilina heterotoma EVs. While p40, a predicted …

Covid-19: The Spearpoint Of Human–Wildlife Interactions, Terry A. Messmer

Human–Wildlife Interactions

This is the letter from the editor-in-chief.

Monograph Reduced Box Price: Managing Human–Deer Conflicts

Human–Wildlife Interactions

Order form for HWI monograph, Methods for Managing Human–Deer Conflicts in Urban, Suburban, and Exurban Areas. This monograph identifies challenges and benefits associated with many human–deer conflict mitigation actions as well as methods to monitor the response of deer populations to management actions. Deer exploit urban, suburban, and exurban areas where human populations provide anthropogenic attractants, either intentionally or inadvertently, which often leads to human–deer conflicts. Mitigating actions have varying degrees of efficacy and may not be effective or accepted in every situation. Wildlife and municipal managers must work together to seek methods to reduce attractants, mitigate conflicts, and perpetuate …

In The News, Ike Ionel, Jessica Tegt

Human–Wildlife Interactions

Items in the news.

Cover, Editorial Staff, Journal Information

Human–Wildlife Interactions

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Synthesis Of Nest Predation Impacts Of Common Ravens On Sensitive Avian Species, Peter S. Coates, William C. Webb, Seth J. Dettenmaier, Seth M. Harju, David J. Delehanty

Human–Wildlife Interactions

Decades of mounting scientific evidence have revealed that common raven (Corvus corax; raven) population numbers have been increasing across nearly all regions of their geographic range in North America. Concomitantly, numerous native wildlife species have experienced elevated predation rates from ravens as populations have increased and expanded their range. Managers are concerned that increased raven predation of many threatened and endangered avian species in the U.S. and Canada during nesting periods may be hampering species recovery. We explored the literature to aggregate existing knowledge and evaluate the impacts of raven predation on nests and young of sensitive avian …

Common Ravens Disrupt Greater Sage-Grouse Lekking Behavior In The Great Basin, Usa, Joseph L. Atkinson, Peter S. Coates, Brianne E. Brussee, Ian A. Dwight, Mark A. Ricca, Pat J. Jackson

Human–Wildlife Interactions

Expansion of human enterprise has contributed to increased abundance and distribution of common ravens (Corvus corax; ravens) across sagebrush (Artemisia spp.) ecosystems within western North America. Ravens are highly effective nest predators of greater sage-grouse (Centrocercus urophasianus; sage-grouse), a species of high conservation concern. Sage-grouse population trends are estimated using count survey data of males attending traditional breeding grounds, known as leks. We sought to investigate associations of ravens to sage-grouse lek sites and document interactions between the sage-grouse and ravens as well as those between sage-grouse and other animals observed around leks. First, we …

Monograph Reduced Box Price: Managing Human–Deer Conflicts

Human–Wildlife Interactions

Order form for HWI monograph, Methods for Managing Human–Deer Conflicts in Urban, Suburban, and Exurban Areas. This monograph identifies challenges and benefits associated with many human–deer conflict mitigation actions as well as methods to monitor the response of deer populations to management actions. Deer exploit urban, suburban, and exurban areas where human populations provide anthropogenic attractants, either intentionally or inadvertently, which often leads to human–deer conflicts. Mitigating actions have varying degrees of efficacy and may not be effective or accepted in every situation. Wildlife and municipal managers must work together to seek methods to reduce attractants, mitigate conflicts, and perpetuate …

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Phenotypic Characterization Of Table Mountain (Pinus Pungens) And Pitch Pine (Pinus Rigida) Hybrids Along An Elevational Gradient In The Blue Ridge Mountains, Virginia, Alexander L. Brown

Theses and Dissertations

Hybridization has played a long-standing role in the evolution of both plant and animal species and allows for the sharing of genetic information between lineages. Here, potential hybridization of a species endemic to the Appalachian Mountains, Table Mountain pine (Pinus pungens), and pitch pine (Pinus rigida) was investigated along an elevational gradient, through the use of phenotypic measurements: cone length, cone width, and needle length. Phenotypes were used to identify hybrids in a three-tiered elevational sampling method at two sites in Shenandoah National Park with the use of linear discriminant analysis. It was found that hybridization …

The Mechanisms And Consequences Of Shrub Encroachment On The Virginia Barrier Islands, Lauren K. Wood

Theses and Dissertations

Shrub encroachment is a global phenomenon driven by direct and indirect anthropogenic influence which alters plant communities and ecosystem function. Many studies have investigated drivers and consequences of woody plant establishment, but mesic landscapes are underrepresented in the literature. My objective was to assess the mechanisms of Morella cerifera encroachment into coastal mesic grassland, the potential for self-reinforcement, and consequences on community composition, nutrients, and landscape productivity. I studied temperature and water microclimate modification by Morella cerifera presence and removal to understand ecosystem engineering and community composition changes. Additionally, I examined the influence of shrubs on surrounding grassland species traits …

Use Of Redwood Basal Hollows By Bats: A Focus On The Townsend's Big-Eared Bat On The North Coast Of California, Amon Jotesh Armstrong

Cal Poly Humboldt theses and projects

Loss of roosting resources, either through disturbance or removal, negatively affects bats. For sensitive species, such as the Townsend’s big-eared bat (Corynorhinus townsendii), determining roost requirements is a critical component in conserving their habitat. Such cavity roosting bats on the North Coast of California may use hollows in large redwood trees. In this study, I examined the factors determining the use of basal tree hollows by different bat species at eight redwood forest sites in Del Norte, Humboldt, and Mendocino Counties, California. Bat guano was collected from 179 basal hollow roosts from 2017 to 2018, and guano mass …

Macroinvertebrate Responses To Hydrological Variation In Experimental Wetlands., Sergio A. Sabat-Bonilla

College of Graduate Studies: Theses & Dissertations

Predicted increases in the frequency of intense storms and periods of severe drought due to climate change represent a threat to wetland macroinvertebrate communities through alterations to the hydrological regime. I used experimental ponds to assess the effects of water permanence (i.e., duration of flooding) on the communities of aquatic macroinvertebrates. I predicted that permanent ponds would harbor higher diversity of longer-lived taxa whereas temporary ones will favor colonization by quick turnover, short-lived taxa and support lower consumer diversity. Results show differences in macroinvertebrate communities between permanent and temporary ponds can be mostly explained by hydrology and the amount of …

Measuring The Success Of A Coastal Sand Dune Restoration On Tybee Island: Plant Growth, Sand Accretion, And Implications For Management, Shannon Matzke

College of Graduate Studies: Theses & Dissertations

Coastal communities are developing rapidly in the face of increased risks of sea level rise and hurricanes stemming from anthropogenic climate change. In the US, erosion is projected to cost $530 million/year in property loss, but beaches and dune systems can minimize these losses. Dunes are vital to coastal protection, particularly when they are colonized by native plant species that stabilize sand with their root systems and accumulate sand by trapping particles with their stems and leaves. Dune construction can be used as a nature-based solution to climate change, but more studies are needed to fully understand the best practices …

Do Beaver Dam Analogues Act As Passage Barriers To Juvenile Coho Salmon And Juvenile Steelhead Trout?, Christopher G. O'Keefe

Cal Poly Humboldt theses and projects

In the Pacific Northwest, the human-caused reduction of quality and quantity of freshwater rearing habitat is a limiting factor for Pacific Salmon populations. Beaver dam analogues (BDAs) increase suitable rearing habitat for juvenile salmonids and promote the restoration of critical stream processes. Installing BDAs is an increasingly popular alternative to more intensive restoration techniques, due to the relatively low cost and effort required to install BDA structures. However, widespread installation of BDAs has been slowed by regulatory agencies’ concerns that BDAs may impede fish passage. Few studies have empirically assessed the extent to which BDAs impede fish passage, and no …

Preclassic Cultural Eutrophication Of Lake Petén Itzá, Lowland Guatemala, By The Early Maya Of Nixtun-Ch'ich', Brooke A. Birkett

Masters Theses

"Paleolimnological evidence indicates the ancient Maya transformed lowland terrestrial ecosystems by felling forest vegetation to construct large civic-ceremonial centers and expand agriculture. The effects of prehistoric Maya land alterations on lake trophic status, however, remain poorly understood. We analyzed a 515-cm-long sediment core from Lake Petén Itzá, lowland Guatemala, to infer paleoenvironmental changes resulting from Maya occupation of the riparian archaeological site of Nixtun-Ch'ich'. Substantial increases in charcoal and fecal stanol concentrations indicate Maya occupation of the Candelaria Peninsula by the late Early Preclassic period beginning ca. 1400 cal yr Before the Common Era (hereafter BCE), despite scant archaeological evidence …

Jaguars And Pumas Exhibit Distinct Spatiotemporal Responses To Human Disturbances In Colombia’S Most Imperiled Ecoregion, Joe J. Figel, Sebastián Botero-Cañola, Juan David Sánchez-Londoño, Javier Racero-Casarrubia

University of Nebraska State Museum: Mammalogy Papers

Abstract

Coexistence of sympatric felids is facilitated by mutual avoidance and the partitioning of habitats, prey, and time. Anthropogenic disturbances disrupt this coexistence in fragmented landscapes, potentially triggering cascading influences in ecological communities. We used photographic data from 8,717 trap nights (November 2014–June 2016) at 87 camera trap sites in Colombia’s middle Magdalena River basin to compare spatiotemporal overlap among jaguars (Panthera onca), pumas (Puma concolor), their prey, and humans, at sites of high and low disturbance, as determined by the human influence index. Human disturbance events (e.g. domestic dogs, livestock, and humans, including armed hunters) …

Applications Of Machine Learning In Microbial Forensics, Ryan B. Ghannam

Dissertations, Master's Theses and Master's Reports

Microbial ecosystems are complex, with hundreds of members interacting with each other and the environment. The intricate and hidden behaviors underlying these interactions make research questions challenging – but can be better understood through machine learning. However, most machine learning that is used in microbiome work is a black box form of investigation, where accurate predictions can be made, but the inner logic behind what is driving prediction is hidden behind nontransparent layers of complexity.

Accordingly, the goal of this dissertation is to provide an interpretable and in-depth machine learning approach to investigate microbial biogeography and to use micro-organisms as …