Evolution Commons^™

Changes In Behavior And Emotion Under Chicken Domestication, Martin Johnsson

Animal Sentience

Marino’s target article provides an overview of chickens’ cognition, emotion, and personality, with the aim of changing how people view chickens. In this commentary, I will agree that chickens deserve better than their reputation, but contend with a statement about the lack of behavioral change under chicken domestication.

Phylogeography And Vicariant Separation Of Two River Darters, Percina Uranidea And Percina Vigil, From Rivers That Drain The North American Interior Highlands, T. Yamashita, J. M. Rigsby, J. Stoeckel

Journal of the Arkansas Academy of Science

The phylogeography and separation of two river darters, Percina uranidea and P. vigil were investigated through sequencing of the mitochondrial Cytochrome B and Cytochrome Oxidase genes. These molecular markers revealed the darters exhibit moderate genetic divergence between two large river drainage systems within the Mississippi River basin associated with the Interior Highlands of midwestern North America. An additional haplotype network analysis also supported these trends. Phylogenetic divergence dating indicated that population separation between the river systems occurred after recent Pleistocene glacial events rather than an early Pleistocene separation.

Intertemporal Choice And Delayed Gratification, Jeffrey R. Stevens

Jeffrey Stevens Publications

A parasitoid wasp has deposited half of her eggs in a host. She now faces the choice between depositing her remaining eggs in the same host or searching for another. Continuing to deposit in the current host provides the immediate payoff of completing her reproductive duties, allowing her to move on to other activities such as foraging or searching for another mate. Searching for another host, in contrast, delays the payoffs of reproducing until a suitable host is found. This wasp faces an intertemporal choice—that is, a choice between options that involve payoffs available at different times (Read, 2004; Stevens, …

Evolutionary Linkage Of Mimetic And Non-Mimetic Color Traits In A Coral Snake Mimicry Complex, John D. Curlis Jr

College of Graduate Studies: Theses & Dissertations

Color polymorphism in aposematic mimicry systems is a perplexing phenomenon for evolutionary biologists, as theoretically the benefits of converging on a model phenotype should constrain the evolution of phenotypic diversity in these systems (i.e., color polymorphism should not occur). Nevertheless, color polymorphism in mimicry systems is prevalent throughout many taxa. In some of these systems, the evolution of color polymorphism results in the existence of non-mimetic morphs, such as those that are cryptic. The case of ground snakes (Sonora semiannulata) is unique in that color polymorphism encompasses both mimetic and cryptic morphs, as well as individual mimetic and …

¬Multilocus Phylogeny Of The Lichen Family Megasporaceae, Tim B. Wheeler

Graduate Student Theses, Dissertations, & Professional Papers

The lichen symbiosis is one of the oldest studied mutualisms; in fact, Frank and De Bary coined the term "symbiosis" while studying lichens (Frank, 1877; De Bary 1879). The widespread, stable association between the mycobiont and photobiont in lichens offers an ideal system for the study of co-evolution. The recent application of molecular data to lichens has begun to unveil the complexities involved in these associations (Upreti et al. 2015, Spribille et al. 2016). Lichenized fungi make up a huge fraction of fungal diversity (Nash 2008), yet very little is known of their genetic diversity. Fungal taxonomy is notoriously difficult …

Differentiation, Distribution, And Diversity Of The Borrelia Burgdorferi Sensu Lato Virulence Gene, Ospc, And The Overwintering Survivability Of The Tick Vector, Ixodes Scapularis, Melissa Beth Stone

Legacy Theses & Dissertations (2009 - 2024)

The causative agents of Lyme disease, or Lyme Borreliosis, are spirochetes in the Borrelia burgdorferi sensu lato (s.l.) species complex that are transmitted by ticks in the genus Ixodes. Certain B. burgdorferi s.l. genotypes are more likely to cause invasive, disseminated infection in humans, and the gene, ospC, has been identified as a molecular marker that can be used to predict virulence. ospC is the most polymorphic locus in the B. burgdorferi s.l. genome, and different alleles have been assigned to Major ospC Groups based on sequence dissimilarity. Issues with the Major ospC Group definition and nomenclature are pervasive in …

Five Species Of Fossil Equids Preserved In-Situ At Ashfall Fossil Beds, Rick E. Otto

University of Nebraska State Museum: Programs Information

Fully articulated, three-dimensionally preserved skeletons from five species of fossil Equids are now represented, and preserved in-situat the Ashfall Fossil Beds in northcentral Nebraska. The site is well known for dozens of barrel-bodied rhino (Teleoceras major) skeletons. A diversity of horse species that inhabited Nebraska during the late Miocene Epoch have been exposed in the fossil bed. Genera include Cormohipparion, Neohipparon, Pliohippus, Protohippus, and Pseudhipparion. An exceptionally well-preserved skeleton of the small-sized, three-toed species Pseudhipparion gratumwas recently exposed, and is on display only a few feet from where visitors stand.

Primate Proteomic Composition Of Seminal Plasma And Prostate-Specific Transglutaminase Activity In Relation To Sexual Selection., Amanda M.C. Zielen

Electronic Theses and Dissertations

Humans (Homo sapiens), chimpanzees (Pan troglodytes), and gorillas (Gorilla gorilla) have diverse mating systems with varying levels of sperm competition. Several seminal plasma genes have been claimed to evolve under positive selection, while others are altered or lost. This study aims to identify biologically relevant differences among seminal plasma proteomes of primates in relation to mating systems and previous genomic studies. Seminal plasma from three individuals of each species were run in triplicate in shotgun liquid chromatography – tandem mass spectrometry (LC-MS/MS) and confirmed with Western blots. Over 7,000 peptides were identified across all …

Examining The Role Of Host Use On Divergence In The Redheaded Pine Sawfly, Neodiprion Lecontei, Across Multiple Spatial Scales, Robin Kimberly Bagley

Theses and Dissertations--Biology

Phytophagous insects make up over one quarter of described species on Earth, and this incredible diversity seems directly linked to feeding on plants. Comparative studies of sister groups have shown shifts to herbivory are consistently associated with increased species diversity in insects, but the reasons for this diversification remain unclear. While other explanations, such as decreased extinction rates or influences on population structure, exist, one prominent hypothesis suggests shifts and subsequent adaptation to novel host plants can lead to the evolution of reproductive barriers.

Given their extreme specialization on host plants in the genus Pinus and intimate, life-long association with …

Evolution Of Equine Arteritis Virus During Persistent Infection In The Reproductive Tract Of The Stallion And The Male Donkey, Bora Nam

Theses and Dissertations--Veterinary Science

Equine arteritis virus (EAV) establishes persistent infection in the stallion reproductive tract, and the carrier stallion continues to shed virus in semen for weeks to years or lifelong. The objective of this study was to elucidate the intra-host evolution of EAV during persistent infection in stallions. Seven EAV seronegative stallions were experimentally infected with EAV KY84 strain and followed for 726 days post-infection, and sequential clinical samples including semen were collected for virus isolation and next-generation sequencing (NGS). In addition, archived sequential semen samples from two stallions that were naturally infected with EAV KY84 for a long-period (up to 10 …

The Value Of Bayesian Statistics For Assessing Credible Evidence Of Animal Sentience, Anil K. Seth, Zoltan Dienes

Animal Sentience

Determining what constitutes practically relevant, statistically significant evidence for animal sentience, under the precautionary principle, could be enhanced through Bayesian statistics. A Bayesian approach allows the incorporation of multiple evidence sources through prior probabilities, the tracking of changing evidence across time, and a principled means of adjusting evidentiary bars via Bayes factors.

Evolution Of Molt Phenology In Dwarf Hamsters, Zachary Clare-Salzler

Graduate Student Theses, Dissertations, & Professional Papers

Environmental seasonality presents many challenges for survival. In response, organisms from across the tree of life exhibit adaptive phenology, which can facilitate survival from season to season. In particular, many species are white in the winter and brown in the summer where winter snow cover alters the visual environment. There is an extensive body of literature describing the physiological and cellular regulation of this trait in the Siberian dwarf hamster (Phodopus sungorus), but there are major shortcomings in our understanding concerning the evolution and molecular regulation of mammalian skin phenology. Notably, little is known about the genetic basis …

Alá Es Primero: Faith And Culture On The Mexican-American Border, Alan Ventura

Open Access Theses & Dissertations

The purpose of this Thesis is to show how El Paso Latino Muslims create a new cultural language when they harmonize their Mexican cultural practices with Islam.

What Can Vigilance Tell Us About Fear?, Guy Beauchamp

Animal Sentience

Animal vigilance is concerned with the monitoring of potential threats caused by predators and conspecifics. Researchers have argued that threats are part of a landscape of fear tracking the level of risk posed by predators and conspecifics. Vigilance, which is expected to vary with the level of risk, could thus be used as a measure of fear. Here, I explore the relationship between vigilance and fear caused by predators and conspecifics. The joint occurrence of vigilance and other physiological responses to fear, such as increased heart rate and stress hormone release, would bolster the idea that vigilance can be a …

Operationalizing Fear Through Understanding Vigilance, Ralph Adolphs

Animal Sentience

Beauchamp’s target article raises important questions about the features that often accompany fear. How reliable an indicator of fear is vigilance? Is it constitutive, cause, or consequence of fear? These questions force us towards a clearer definition of “fear.”

Individual Variation In Fear Behaviour, Rob Found

Animal Sentience

Individual variation in behaviour adds another layer of complexity to studies of animal responses to fear and risk, but when individual responses are consistent, and correlated with other behaviours, these patterns can provide a structure that furthers our understanding. I interpret Beauchamp’s review of vigilance and fear from the perspective of my own studies of elk personality. Wild elk responses to changing stimuli (benign or aversive) illustrate how personality is a key factor in explaining variation in vigilance and fear behavior. Personality even influences how wildlife can learn to assess risk and adjust their fear responses accordingly.

Fear And Loathing On The Landscape: What Can Foraging Theory Tell Us About Vigilance And Fear?, Burt P. Kotler, Joel S. Brown

Animal Sentience

We discuss fear and vigilance from the perspective of foraging theory. Rather than focusing on proximate indicators of fear, we suggest that fear is an adaptation for assigning a cost to activities that incur a risk of injury or death. We use theory to provide definitions for fear and vigilance and then use that theory to compare them. We agree that there are limits to the reliability of vigilance as an indicator of fear, but we arrive at this conclusion differently.

Empathy In Dogs: With A Little Help From A Friend – A Mixed Blessing, Sabrina Karl, Ludwig Huber

Animal Sentience

Kujala (2017) presents an extensive overview of existing research on canine emotions in comparison to those of other non-human animals and humans. This commentary provides some additional research results on the intensively debated field of empathy in dogs. We focus on recent advances in the understanding of a fundamental building block of empathy — emotional contagion — and on dogs’ remarkable sensitivity for human emotions, including the skills of assistance dogs.

Consciousness In Teleosts: There Is Something It Feels Like To Be A Fish, Michael L. Woodruff

Animal Sentience

Ray-finned fish are often excluded from the group of non-human animals considered to have phenomenal consciousness. This is generally done on the grounds that the fish pallium lacks a sufficiently expansive gross parcellation, as well as even minimally sufficient neuronal organization, intrinsic connectivity, and reciprocal extrinsic connections with the thalamus to support the subjective experience of qualia. It is also argued that fish do not exhibit the level of behavioral flexibility indicative of consciousness. A review of neuroanatomical, neurophysiological and behavioral studies is presented which leads to the conclusion that fish do have neurobiological correlates and behavioral flexibility of sufficient …

Nagel-Ing Worries About Fish Sentience, Hugh Lafollette

Animal Sentience

Woodruff (2017) argues that teleosts’ more sophisticated behaviors make sense only if they are sentient. Moreover, their neuroanatomy, although different from mammalian, is sufficiently complex to support sentience. I answer some potential objections to Woodruff’s argument, and try to trace its moral significance. In so doing, I briefly address Birch’s (2017) target article as well.