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Three-Dimensional Staging Series Of Anolis Sagrei, Lilian Epperlein 2022 Loyola University Chicago

Three-Dimensional Staging Series Of Anolis Sagrei, Lilian Epperlein

Master's Theses

With the rapid rise of Evo-devo and the concurrent development of new imaging techniques, comparative studies of development have accelerated over the last decade. Squamates, lizards and snakes, lack a traditional experimental model species for developmental investigations, yet are important for understanding fundamental evolutionary questions because of their remarkable diversity. However, several squamate species have growing communities of biologists building new resources for comparative and experimental studies of lizard development. Creation of detailed embryological atlases for these species will help promote their advancement. In the past, scientists have had to rely on destructive methods to take apart biological samples which …


Identifying The Human Homologs Of Yeast Rab Proteins Ypt10 & Ypt11 And A Global-Scale Louse Endosymbiont Genome Variation, Nathaniel P. Smith 2022 Virginia Commonwealth University

Identifying The Human Homologs Of Yeast Rab Proteins Ypt10 & Ypt11 And A Global-Scale Louse Endosymbiont Genome Variation, Nathaniel P. Smith

Theses and Dissertations

Amyotrophic lateral sclerosis (ALS) is a late-onset fatal neurodegenerative disease that causes loss of upper and/or lower motor neurons, and currently has no treatment or cure available. Over 90% of cases occur spontaneously with unknown causes, highlighting the complexity of the disease, and only 10% of cases are linked to heritable genetic mutations. Numerous ALS-linked genes are conserved through evolution, and model organisms may therefore provide opportunities to understand disease pathology at a molecular or cellular level, proving instrumental in identifying therapeutic targets. ALS subtype 8 (ALS8) is caused by an autosomal dominant P56S mutation in the VAPB gene that …


Mortality In Interspecific Hybrids Of Nasonia Vitripennis And Nasonia Giraulti, Bonnie Cobb 2022 Georgia Southern University

Mortality In Interspecific Hybrids Of Nasonia Vitripennis And Nasonia Giraulti, Bonnie Cobb

College of Graduate Studies: Theses & Dissertations

Nasonia is a parasitoid wasp genus that serves as an emerging model for studying speciation due to an incompatibility between nuclear and mitochondrial genomes between sister taxa. Short generation times, easy rearing in a lab setting, producing large amounts of progeny, and whole genome sequencing make Nasonia is an excellent candidate for studying incomplete reproductive isolation. Nasonia have five chromosomes and exhibit haplo-diploid sex determination in which fertilized eggs develop into diploid females and unfertilized eggs develop into haploid males. Recessive phenotypes are hidden in diploid females but are laid bare in haploid males as there is no interaction between …


Population Genomics Of Redbreast Sunfish (Lepomis Auritus): Exploring Gene Flow And Local Adaptation In A Widely Distributed Freshwater Fish, Garret J. Strickland 2022 Georgia Southern University

Population Genomics Of Redbreast Sunfish (Lepomis Auritus): Exploring Gene Flow And Local Adaptation In A Widely Distributed Freshwater Fish, Garret J. Strickland

College of Graduate Studies: Theses & Dissertations

Little information is available concerning the distribution of genetic diversity in non-salmonid, non-imperiled, freshwater fish. In order to fill in this knowledge gap, I conducted a population genomics survey in Redbreast Sunfish (Lepomis auritus; RBS), a widespread, generalist species distributed along the Atlantic slope rivers of eastern North America. I sampled four basins (ACF, Savannah, Roanoke, and James) at eight sites each with a factorial experimental design. Sites were distributed among coastal plain, Piedmont, or mountain ecoregions in order to capture the greatest range of environmental states experienced by RBS, with the intention of finding evidence for local adaptation to …


Defending Human Difference By Raising The Bar, Joe Gough 2022 University of Sussex

Defending Human Difference By Raising The Bar, Joe Gough

Animal Sentience

Chapman & Huffman (C&H) offer a theory of why we humans want to believe that we are different: to justify our cruelty to animals. This commentary offers further supporting evidence of this and examines more closely what the claim that humans are ‘different’ amounts to. It also considers some methodological issues in animal psychology closely related to C&H ‘s theory. These problems result from a common strategy for defending hypotheses about human difference.


Of Course Crustaceans Are Sentient: But There's More To The Story, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr. 2022 University of British Columbia

Of Course Crustaceans Are Sentient: But There's More To The Story, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr.

Animal Sentience

We are in basic agreement with Crump et al. that animal welfare, particularly with regard to the experience of pain, is a topic of importance. However, we come to the issue from a different perspective, one in which all species are sentient and can feel pain. The implications of this theory are discussed.


Time To Stop Pretending We Don’T Know Other Animals Are Sentient Beings, Marc Bekoff 2022 Animal Studies Repository

Time To Stop Pretending We Don’T Know Other Animals Are Sentient Beings, Marc Bekoff

Animal Sentience

Rowan et al.’s target article is an outstanding review of some of the history of the science of sentience, but one would have liked to see a much stronger “call to action.” We don’t need any more data to know that many other animals are sentient beings whose lives must be protected from harm in a wide variety of contexts. It is not anti-science to want more action on behalf of other animals right now.


All Living Organisms Are Sentient, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr. 2022 University of British Columbia

All Living Organisms Are Sentient, Arthur S. Reber, Frantisek Baluska, William B. Miller Jr.

Animal Sentience

We argue that all living organisms, from the simplest unicellular prokaryotes to Homo sapiens, have valenced experiences—feelings as states of preference—and are capable of cognitive representations. Bacteria can learn, form stable memories, and communicate, hence solve problems. Rowan et al.'s statement that "Subjective feelings are just that — subjective — and are available only to the animal (or human) experiencing them" is true but irrelevant. When we see a fish flopping about in the bottom of a boat we immediately recognize suffering without having a glimpse of the nature of piscine distress. Some controlled anthropomorphism can go a …


Sentience Politics : A Fishy Perspective, Culum Brown 2022 Macquarie University

Sentience Politics : A Fishy Perspective, Culum Brown

Animal Sentience

The plight of fishes has almost certainly got worse since Bentham (1789) coined the phrase “The question is not Can they reason? nor, Can they talk? but Can they suffer?” Despite the fact that fishes are increasingly recognised as sentient animals worthy of protection under animal welfare legislation in many countries around the world, fishing practices are almost universally exempt activities. The human population continues to grow, and, surprisingly, per capita intake of fish is still increasing (FAO 2020). The source of this fish is not wild stocks (catches of which have remained more or less stagnant for …


The Question Is Not “Can Humans Talk?” Or “Can They Suffer?” But “Can They Reason?”, Clive Phillips 2022 Estonian University of Life Sciences

The Question Is Not “Can Humans Talk?” Or “Can They Suffer?” But “Can They Reason?”, Clive Phillips

Animal Sentience

In their target article, Rowan et al (2022) make a welcome attempt to chart the development of Western progress over the past two hundred years toward formally recognizing that animals feel. They outline the heroic efforts of Compassion in World Farming to gain for animals the status of sentient beings rather than merely human property. A broader view exists, from human prehistory to the present day, in which animals have been (and still are) understood to be sentient by indigenous peoples as well as by some Eastern religions. Growing recognition in the West that animals feel represents a new age …


The Science Of Animal Sentience And The Politics Of Animal Welfare Should Be Kept Separate, Marian Stamp Dawkins 2022 University of Oxford

The Science Of Animal Sentience And The Politics Of Animal Welfare Should Be Kept Separate, Marian Stamp Dawkins

Animal Sentience

Although linked historically by Rowan et al., the scientific study of animal sentience and political campaigns to improve animal welfare should be kept separate, for at least two reasons. First, the separation makes it clear that standards of evidence acceptable for ethical or political decisions on animal welfare can be lower than those required for a rigorously scientific approach to animal sentience. Second, it helps to avoid confirmatory bias in the form of giving undue weight to results that are in line with pre-conceived ideas and political views.


The Reality And Prevalence Of Animal Sentience, Antonio Damasio 2022 University of Southern California

The Reality And Prevalence Of Animal Sentience, Antonio Damasio

Animal Sentience

Rowan et al use findings from neurobiology, clinical neurology, and general biology to argue for the extensive presence of sentience in animals, but they are wisely cautious concerning when in the phylogenetic scale that emergence occurred.


An Analysis Of The Spatial Genetic Structure Of A Hybrid Zone Between Two Species Of Killifish, Fundulus Heteroclitus And F. Grandis, Andrew Lee Hardy 2022 University of North Florida

An Analysis Of The Spatial Genetic Structure Of A Hybrid Zone Between Two Species Of Killifish, Fundulus Heteroclitus And F. Grandis, Andrew Lee Hardy

UNF Graduate Theses and Dissertations

Hybridization offers unique insight into the evolutionary process of speciation and the forces that maintain barriers to reproduction. In northeast Florida, a hybrid zone between two species of killifish, Fundulus heteroclitus and F. grandis, has been identified near Flagler Beach, FL, although the exact boundaries of the hybrid zone remain unknown (Gonzalez et al. 2009). This study aims to determine the fine-scale spatial genetic patterns of the hybrid zone and test the hypothesis that species ranges are influenced by changes in dominant vegetation. Results from an ADMIXTURE analysis and FST data indicated the boundary of the area of …


Legal Recognition Of Animal Sentience: The Case For Cautious Optimism, Jane Kotzmann 2022 Deakin University, Melbourne

Legal Recognition Of Animal Sentience: The Case For Cautious Optimism, Jane Kotzmann

Animal Sentience

Rowan et al.’s target article provides a valuable indication of the work that was required to reach the point where animals are recognised as sentient in various laws. To ensure this work was not in vain, the language of sentience needs to be used as a moral currency to demand further cultural change involving greater human respect for animals.


An Integrative Investigation Of The Synechococcus A/B Clade During Adaptive Radiation At The Upper Thermal Limit Of Phototrophy, Christopher L. Pierpont 2022 University of Montana, Missoula

An Integrative Investigation Of The Synechococcus A/B Clade During Adaptive Radiation At The Upper Thermal Limit Of Phototrophy, Christopher L. Pierpont

Graduate Student Theses, Dissertations, & Professional Papers

Thermophilic microorganisms have been scientifically observed since the early nineteenth century and have spurred many questions about the limits of life and the capacity of organisms to survive extreme conditions. Decades of research on thermophile proteins and genomes have yielded several proposed correlates of temperature that may contribute to adaptation of bacteria and archaea to high temperature. However, many of the generalizations reported are drawn from analyses of deeply divergent taxa or from individual case studies in isolation from mesophilic relatives. Members of the Synechococcus A/B (SynAB) group are the only cyanobacteria with members able to grow above 65 °C …


Evaluating Population Genetic Structure And Potential Genomic Signals Of Natural Selection In A Migratory Songbird (Protonotaria Citrea), Tyler A. Hohenstein 2022 Virginia Commonwealth University

Evaluating Population Genetic Structure And Potential Genomic Signals Of Natural Selection In A Migratory Songbird (Protonotaria Citrea), Tyler A. Hohenstein

Theses and Dissertations

In this study I attempted to further resolve the population genetic structure in the Prothonotary Warbler (Protonotaria citrea), and conducted an outlier SNP analysis and exploratory gene ontology analysis to investigate potential ongoing natural selection in the species. This analysis of population structure confirms previous work by DeSaix et al. (2019), where weak population structure was observed between eastern sites along the Atlantic Coastal Plain, and western sites in the Mississippi Alluvial Valley, possibly due to a genetic discontinuity across the Appalachian Mountains. I conducted two forms of outlier SNP analyses, a principal component analysis (PCA)-based approach to identify SNPs …


Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Xxvii. Lanzatus Huluul Sp. N. From Somaliland (Buthidae), František Kovařík, Graeme Lowe 2021 Marshall University

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Xxvii. Lanzatus Huluul Sp. N. From Somaliland (Buthidae), František Kovařík, Graeme Lowe

Euscorpius

The rare Horn of Africa buthid genus Lanzatus Kovařík, 2001 was newly collected in Somaliland in two localities. We describe a new species Lanzatus huluul sp. n. fully illustrated with color photos showing its morphology, habitus, hemispermatophore and collection areas.


The Energetics Of Uniquely Human Subsistence Strategies, Thomas S. Kraft, Vivek V. Venkataraman, Ian J. Wallace, Alyssa N. Crittenden, Nicholas B. Holowka, Jonathan Stieglitz, Jacob Harris, David A. Raichlen, Brian Wood, Michael Gurven, Herman Pontzer 2021 University of California, Santa Barbara

The Energetics Of Uniquely Human Subsistence Strategies, Thomas S. Kraft, Vivek V. Venkataraman, Ian J. Wallace, Alyssa N. Crittenden, Nicholas B. Holowka, Jonathan Stieglitz, Jacob Harris, David A. Raichlen, Brian Wood, Michael Gurven, Herman Pontzer

Anthropology Faculty Research

The suite of derived human traits, including enlarged brains, elevated fertility rates, and long developmental periods and life spans, imposes extraordinarily high energetic costs relative to other great apes. How do human subsistence strategies accommodate our expanded energy budgets? We found that relative to other great apes, human hunter-gatherers and subsistence farmers spend more energy but less time on subsistence, acquire substantially more energy per hour, and achieve similar energy efficiencies. These findings revise our understanding of human energetic evolution by indicating that humans afford expanded energy budgets primarily by increasing rates of energy acquisition, not through energy-saving adaptations such …


A New Species Of Vaejovis From The Mule Mountains Above Bisbee, Arizona (Scorpiones: Vaejovidae), Brandon T. Myers, Richard F. Ayrey 2021 Marshall University

A New Species Of Vaejovis From The Mule Mountains Above Bisbee, Arizona (Scorpiones: Vaejovidae), Brandon T. Myers, Richard F. Ayrey

Euscorpius

No abstract provided.


Lipidomic Analysis Of Various Developmental Stages Of Physcomitrium Patens, Deepshila Gautam 2021 East Tennessee State University

Lipidomic Analysis Of Various Developmental Stages Of Physcomitrium Patens, Deepshila Gautam

Electronic Theses and Dissertations

Lipids maintain fluidity of the cell membrane during the lifetime of all organisms. The moss Physcomitrium patens, an early land plant, enters reproductive phase under cold (15°C) conditions relative to its gametophytes (22°C). Thus, we hypothesized that their lipid content and composition would be distinct. Using ESI-MS/MS, we showed that the content and acyl composition of 11 lipid classes varied during development. Galactolipids were abundant in gametophytes but insignificant in sporophytes; among phospholipids, phosphatidylcholine was predominant in both phases. Although, sporophytes contained around five-fold less lipids than the gametophyte, their phosphatidic acid content, which accumulates during stress, was 18-fold …


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