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Resolving The Paradox Of Polyploidy: Underexplored Facets Of Polyploid Plants, Benjamin P. Gerstner 2023 University of New Mexico

Resolving The Paradox Of Polyploidy: Underexplored Facets Of Polyploid Plants, Benjamin P. Gerstner

Biology ETDs

Polyploidy, or whole genome duplication, is a common phenomenon in plants, but the establishment and persistence of mixed-ploidy populations remains a paradox. This dissertation explores factors that contribute to the persistence and establishment of mixed-ploidy populations in nature. The first chapter investigates the role of unreduced gametes in neopolyploid establishment and finds that variability in their formation rate can have a significant impact on polyploid establishment and persistence. The second chapter searches for evidence of soil microbes exhibiting ploidy-specificity, a pre-condition for microbe-mediated niche differentiation, a possible stabilizing mechanism contributing to ploidy coexistence. Finally, the third chapter tests for microbe-mediated …


Phylogeny And Taxonomy Of Genus Physaria In North America, Binoshi Hettihewa 2023 University of Missouri, St. Louis

Phylogeny And Taxonomy Of Genus Physaria In North America, Binoshi Hettihewa

Theses

Physaria is a genus of ~108 species belonging to family Brassicaceae that is predominantly distributed in Western North America, but one species occurs in Arctic Russia and Northern Canada and several species occur in South America. Regardless of the vast number of species in the genus, the genus lacks a well-resolved phylogeny representing many taxa, partially because phylogeny reconstruction is complicated by the fact that many species of Physaria vary in chromosome numbers and ploidy levels. In chapter 1, we review how polyploids are formed and become established and summarize what is known about variation in chromosome number and ploidy …


Testing The Urban Dulling Hypothesis In An Iridescent Passerine Bird, Joanna Gresham 2023 Kennesaw State University

Testing The Urban Dulling Hypothesis In An Iridescent Passerine Bird, Joanna Gresham

Master of Science in Integrative Biology Theses

Urbanization has brought grave consequences that lead to declines in many species; however, some species thrive in urban ecosystems. This allows us the opportunity to study evolution in real time, as species adapt and change in a new setting. Novel urban ecosystems have led to phenotypic divergence between urban and rural populations. There is a rich body of literature on how songbirds are affected by urbanization, however divergent signaling behaviors are less well understood. Urban color homogenization is well-documented in carotenoid-colored species. However, iridescent plumage is understudied in general, and little is understood about how environmental changes shape iridescent plumage. …


Phylogeographic History Of The Leaf-Eared Mouse, Phyllotis Xanthopygus Complex, Tabitha R. McFarland 2023 University of New Mexico

Phylogeographic History Of The Leaf-Eared Mouse, Phyllotis Xanthopygus Complex, Tabitha R. Mcfarland

Biology ETDs

Museum collections provide essential biodiversity sampling needed to understand the species limits, phylogeny, and biogeographic history of mammals, all key features of the foundation for comparative analyses in ecology and evolution. We add to this framework a diverse assemblage of species of leaf-eared mice (genus Phyllotis) in South America and then focus on the Phyllotis xanthopygus complex by combining available mitochondrial sequence (cytochrome b; cytb) data (351 GenBank samples) with 52 newly sequenced museum samples from the northern extent of this complex’s range (51 from Bolivia and 1 from northern Chile) to reconstruct evolutionary relationships using maximum …


Mitogenomes Revealed The History Of Bison Colonization Of Northern Plains After The Last Glacial Maximum, Igor V. Ovtchinnikov, Blake McCann 2023 University of North Dakota

Mitogenomes Revealed The History Of Bison Colonization Of Northern Plains After The Last Glacial Maximum, Igor V. Ovtchinnikov, Blake Mccann

Biology Faculty Publications

American bison demonstrated differential patterns of extinction, survival, and expansion since the terminal Pleistocene. We determined population dynamics of the Northern Great Plains bison using 40 mitochondrial genomes from radiocarbon dated remains with the age ranging from 12,226 to 167 calibrated years before present. Population dynamics correlated with environmental and anthropogenic factors and was characterized by three primary periods: terminal Pleistocene population growth starting 14,000 years ago, mid Holocene demographic stability between 6700 and 2700 years ago, and late Holocene population decline in the last 2700 years. Most diversification of mtDNA haplotypes occurred in the early Holocene when bison colonized …


Two New Species Of The Remarkable Scorpion Genus Megacormus Karsch, 1881 (Scorpiones: Euscorpiidae), Rolando Teruel, František Kovařík, Graeme Lowe, František Šťáhlavský 2023 Marshall University

Two New Species Of The Remarkable Scorpion Genus Megacormus Karsch, 1881 (Scorpiones: Euscorpiidae), Rolando Teruel, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Two new species of the very interesting euscorpiid scorpion genus Megacormus Karsch, 1881, are herein described from eastern Mexico. Both had been previously misidentified in the published literature, one as Megacormus segmentatus Pocock, 1900, the other as Megacormus granosus (Gervais, 1844), but the direct comparison of adults of both sexes to adult topotypes from all members of the genus currently accepted as valid taxa, revealed solid morphological characters that warrant their recognition as distinct taxa. Both new species seem also to be endemics with a small distribution area, but apparently not restricted to a single locality. This addition raises the …


Plant Sentience: Not Now, Maybe Later?, Helen Tiffin 2023 University of Wollongong

Plant Sentience: Not Now, Maybe Later?, Helen Tiffin

Animal Sentience

Segundo-Ortin’s target article provides compelling evidence for physiological and behavioral complexity in plants, bringing us closer to a recognition of some kind of plant cognition – but it does not as yet offer firm grounds for inferring sentience (feeling) in plants, The recent history of the scientific demonstration and recognition of animalsentience in invertebrates, for example, does not entirely rule out the possibility that further research might provide support for plant sentience. Should this ever turn out to be the case, the ethical problems raised are not insurmountable, and would not threaten the now proven case for animal sentience


Morphological Trait Evolution In Solanum (Solanaceae): Evolutionary Lability Of Key Taxonomic Characters, Rebecca Hilgenhof, Edeline Gagnon, Sandra Knapp, Xavier Aubriot, Eric Tepe, Lynn Bohs, Leandro Giacomin, Yuri Gouvea, Andres Orejuela, Christopher T. Martine, Clara Ines Orozco, Iris E. Peralta, Tina Sarkinen 2023 Bucknell University

Morphological Trait Evolution In Solanum (Solanaceae): Evolutionary Lability Of Key Taxonomic Characters, Rebecca Hilgenhof, Edeline Gagnon, Sandra Knapp, Xavier Aubriot, Eric Tepe, Lynn Bohs, Leandro Giacomin, Yuri Gouvea, Andres Orejuela, Christopher T. Martine, Clara Ines Orozco, Iris E. Peralta, Tina Sarkinen

Faculty Journal Articles

Solanum is one of the world's largest and economically most important plant genera, including 1245 currently accepted species and several major and minor crops (e.g., tomato, potato, brinjal eggplant, scarlet eggplant, Gboma eggplant, lulo, and pepino). Here we provide an overview of the evolution of 25 key morphological traits for the major and minor clades of this giant genus based on stochastic mapping using a well-sampled recently published phylogeny of Solanum. The most evolutionarily labile traits (showing >100 transitions across the genus) relate to plant structure (growth form and sympodial unit structure), herbivore defence (glandular trichomes), pollination (corolla shape …


Characterization Of Antimicrobial Properties Of Excrement And Functional Microbiome Of Black Vultures (Coragyps Atratus), Bridgette Gray 2023 Jacksonville State University

Characterization Of Antimicrobial Properties Of Excrement And Functional Microbiome Of Black Vultures (Coragyps Atratus), Bridgette Gray

Theses

Black vultures, Coragyps atratus, are obligate scavenging birds that consume and dispose of decaying carcasses and carrion. They fulfill a key ecological niche in the environments in which they live. It has been observed that these vultures sometimes excrete bodily waste onto their legs. This adaptive behavior could help aid them in controlling bacteria and other microbes they encounter while stepping into a carcass to eat. This study directly examined the antimicrobial properties of the excrement of black vultures across various bacterial species utilizing a zone of inhibition test and a nematode species utilizing a survival assay. The black vulture …


Development Of A 16s Reference Library For Edna Metabarcoding The Freshwater Fishes Of Western Ecuador., Hannah M. Willis, Olivia G. Schweikart, Windsor E. Aguirre 2023 DePaul University

Development Of A 16s Reference Library For Edna Metabarcoding The Freshwater Fishes Of Western Ecuador., Hannah M. Willis, Olivia G. Schweikart, Windsor E. Aguirre

DePaul Discoveries

This project examines the use of the 16S locus to amplify neotropical freshwater fishes native to Western Ecuador in a newly created 16S reference library for DNA barcoding and eDNA metabarcoding applications. Among the orders Characiformes, Siluriformes, Cichliformes, Gobiiformes, Cryprinodontiformes, Gymnotiformes, and Perciformes, a compendium of 105 specimens were sequenced, with 43 representing new 16S sequences previously unavailable on Genbank.


Molecular And Morphological Confirmation Of Isometrus Maculatus (Degeer, 1778) (Scorpiones: Buthidae) From Northeast India And East Asia, Shubhankar Deshpande, Mihir Joshi, Kazusa Kawai, Arnab Deb, Jeng-Di Lee, Deshabhushan Bastawade, Gaurang Gowande, Shauri Sulakhe 2023 Marshall University

Molecular And Morphological Confirmation Of Isometrus Maculatus (Degeer, 1778) (Scorpiones: Buthidae) From Northeast India And East Asia, Shubhankar Deshpande, Mihir Joshi, Kazusa Kawai, Arnab Deb, Jeng-Di Lee, Deshabhushan Bastawade, Gaurang Gowande, Shauri Sulakhe

Euscorpius

We present molecular data on Isometrus maculatus (DeGeer, 1778) for the first time from India, Japan, and Taiwan based on the COI gene and justify the cosmopolitan nature of this species. We also address the first population of I. maculatus found in Teliamura, Tripura, India and give its detailed description and comparison with the rest of the Isometrus species from India. Furthermore, we discuss the justification for considering Sri Lanka as the true home of I. maculatus.


Animal Communication And Sentience, Catia Correia-Caeiro, Katja Liebal 2023 University of Leipzig, Institute of Biology

Animal Communication And Sentience, Catia Correia-Caeiro, Katja Liebal

Animal Sentience

Segundo-Ortin & Calvo (S&C) argue for sentience in plants on the basis of several studies of what they describe as "cognitive abilities" in plants. As other commentaries (e.g., Brooks Pribac, 2023; Damasio & Damasio, 2023; ten Cate, 2023) have pointed out, however, there is some misuse of several concepts, and a lack of evidence for sentience. We try to clarify three questions in S&C’s discussion: (1) How is communication defined and conceptualised in animal research? (2) Is plant communication comparable to animal communication? (3) Is communication (or the process we see in plants) a good basis for inferring sentience in …


А Review Of Heterometrus In Thailand (Scorpiones: Scorpionidae), Kazusa Kawai, Thornthan Unnahachote, Yossaphon Suttisatid, Victoria Tang 2023 Marshall University

А Review Of Heterometrus In Thailand (Scorpiones: Scorpionidae), Kazusa Kawai, Thornthan Unnahachote, Yossaphon Suttisatid, Victoria Tang

Euscorpius

Five species of the genus Heterometrus Ehrenberg, 1828 are currently confirmed from Thailand and revised, with their respective distribution range in this country updated. Heterometrus laevigatus (Thorell, 1876) is considered a nomen dubium, while its two previous junior synonyms, H. cimrmani Kovařík, 2004, stat. rev. and H. minotaurus Plíšková et al., 2016, stat. rev. are revalidated and redescribed based on the examination of topotypes. Females of H. minotaurus Plíšková et. al., 2016, stat. rev. were also collected and examined, and their characters are herein described with a special attention to sexual dimorphism. Furthermore, some populations previously regarded as H. …


First Report Of Regeneration In The Genus Mesobuthus (Scorpiones: Buthidae), Rıdvan Kurt, Ersen A. Yağmur, Gülhanım Çelik 2023 Marshall University

First Report Of Regeneration In The Genus Mesobuthus (Scorpiones: Buthidae), Rıdvan Kurt, Ersen A. Yağmur, Gülhanım Çelik

Euscorpius

A new example of scorpion leg regeneration is reported in an adult male Mesobuthus mesopotamicus (Penther, 1912). A claw (pretarsus) was observed to regenerate at the distal end of the tibia of the left leg II. The regeneration case is described and illustrated.


Fluidity And Inconstancy: Australian Bush Tomatoes As An Exemplar Of Non-Normative Sex Expression, Christopher T. Martine 2023 Bucknell University

Fluidity And Inconstancy: Australian Bush Tomatoes As An Exemplar Of Non-Normative Sex Expression, Christopher T. Martine

Faculty Journal Articles

Solanum, a genus of ~1500 global species, is one of the more interesting plant groups in which to study reproductive biology and ecology. Overwhelmingly, species in this group express full cosexuality, where individual plants have flowers containing both fully-functioning “male” (staminate) and “female” (carpellate) organs. However, there have been multiple and widespread evolutionary transitions within the genus to non-normative variations on this ancestral condition. Australian bush tomatoes (ca. 40 species) are especially diverse in this regard, with uncommon variation and combinations of unisexuality and cosexuality -- including, most notably, two sexual systems known as dioecy (unisexual male or female …


A Review Of Theropithecus Oswaldi With The Proposal Of A New Subspecies, Dagmawit Abebe Getahun, Eric Delson, Chalachew Mesfin Seyoum 2023 CUNY Graduate Center

A Review Of Theropithecus Oswaldi With The Proposal Of A New Subspecies, Dagmawit Abebe Getahun, Eric Delson, Chalachew Mesfin Seyoum

Publications and Research

Theropithecus oswaldi darti, as currently understood, is the oldest Theropithecus taxon in the fossil record and the earliest subspecies in the Theropithecus oswaldi lineage. Theropithecus oswaldi darti is typified at the site of Makapansgat in South Africa, and a similar form (T. o. cf. darti) is usually recognized at Hadar, Dikika, some Middle Awash localities, and Woranso-Mille in Ethiopia. This taxon is also tentatively believed to occur in Kenya at Kanam and Koobi Fora and in Member C of the Shungura Formation in Ethiopia. While there is a general consensus that the East African ‘darti’ specimens are …


Statistical And Biological Analyses Of Acoustic Signals In Estrildid Finches, Moises Rivera 2023 CUNY Graduate Center

Statistical And Biological Analyses Of Acoustic Signals In Estrildid Finches, Moises Rivera

Dissertations, Theses, and Capstone Projects

Acoustic communication is a process that involves auditory perception and signal processing. Discrimination and recognition further require cognitive processes and supporting mechanisms in order to successfully identify and appropriately respond to signal senders. Although acoustic communication is common across birds, classical research has largely disregarded the perceptual abilities of perinatal altricial taxa. Chapter 1 reviews the literature of perinatal acoustic stimulation in birds, highlighting the disproportionate focus on precocial birds (e.g., chickens, ducks, quails). The long-held belief that altricial birds were incapable of acoustic perception in ovo was only recently overturned, as researchers began to find behavioral and physiological evidence …


Ethical Issues And Standards Of Responsible Research Conduct And Monitoring In An Adventist Institution Of Higher Learning - The Babcock Experience, Kayode O. Ogunwenmo, Godswill N. Anyasor, Grace O. Tayo 2023 Babcock University

Ethical Issues And Standards Of Responsible Research Conduct And Monitoring In An Adventist Institution Of Higher Learning - The Babcock Experience, Kayode O. Ogunwenmo, Godswill N. Anyasor, Grace O. Tayo

Adventist Human-Subject Researchers Association

Ethical issues and standards of responsible research conduct involving human participants are important considerations in any institution of higher learning and in particular Adventist institutions. Research conduct and ethics are reviewed and approved before they begin by the Babcock University Health Research Ethics Committee (BUHREC)


Androctonus Kunti Sp. N. From Iğdır Province, Turkey (Scorpiones: Buthidae), Ersen A. Yağmur 2023 Marshall University

Androctonus Kunti Sp. N. From Iğdır Province, Turkey (Scorpiones: Buthidae), Ersen A. Yağmur

Euscorpius

A new species Androctonus kunti sp. n. is described and illustrated from Iğdır Province of Turkey. This population was first recorded by Birula (1896) as A. crassicauda (Olivier, 1807). A. kunti sp. n. is compared with A. crassicauda as well as A. turkiyensis Yağmur, 2021, which was recently described from Turkey


Associative Learning: Unmet Criterion For Plant Sentience, Luigi Baciadonna, Catherine Macri, Martin Giurfa 2023 Centre de Recherches sur la Cognition Animale, Centre de Biologie Intégrative (CBI), University of Toulouse, CNRS, UPS, Toulouse, France

Associative Learning: Unmet Criterion For Plant Sentience, Luigi Baciadonna, Catherine Macri, Martin Giurfa

Animal Sentience

In a thought-provoking target article, Segundo-Ortin & Calvo (S&C) discuss the possibility that plants are sentient, focusing on a series of capacities normally attributed only to human and nonhuman animals. S&C propose learning as a marker for sentience. We review studies reporting associative learning in plants and find that they either lack essential controls or fail to produce replicable results. The capacity to learn has not yet been demonstrated in plants, so it cannot be used to support the hypothesis that plants are sentient. Further studies are needed. But agnosticism about sentience should not deter us from investigating unexpected new …


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